Strain Fitness in Sphingobium sp. HT1-2 around GFF3024

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
3,096,601	-		GFF3023	0.69	-0.6
3,096,622	+		GFF3023	0.69	+0.3
3,096,647	+		GFF3023	0.70	+0.3
3,096,656	+		GFF3023	0.70	-0.5
3,096,670	+		GFF3023	0.71	-1.5
3,096,674	-		GFF3023	0.71	-0.2
3,096,678	+		GFF3023	0.71	+0.0
3,096,678	+		GFF3023	0.71	+0.7
3,096,678	+		GFF3023	0.71	+1.0
3,096,678	-		GFF3023	0.71	-0.3
3,096,679	-		GFF3023	0.71	+0.4
3,096,686	-		GFF3023	0.71	-0.4
3,096,686	-		GFF3023	0.71	-0.7
3,096,700	+		GFF3023	0.72	-0.4
3,096,700	+		GFF3023	0.72	-0.2
3,096,708	-		GFF3023	0.72	+0.1
3,096,708	-		GFF3023	0.72	+1.1
3,096,708	-		GFF3023	0.72	+0.7
3,096,708	-		GFF3023	0.72	-0.3
3,096,740	+		GFF3023	0.73	-1.6
3,096,780	+		GFF3023	0.74	-0.0
3,096,814	-		GFF3023	0.75	+1.4
3,096,841	-		GFF3023	0.76	+0.5
3,096,856	-		GFF3023	0.76	+0.6
3,096,868	+		GFF3023	0.77	-0.6
3,096,876	-		GFF3023	0.77	-0.7
3,096,880	-		GFF3023	0.77	+1.4
3,096,883	+		GFF3023	0.77	+0.9
3,096,883	+		GFF3023	0.77	-0.7
3,096,883	+		GFF3023	0.77	-2.2
3,096,883	+		GFF3023	0.77	-0.7
3,096,883	+		GFF3023	0.77	+0.2
3,096,883	+		GFF3023	0.77	+1.0
3,096,883	+		GFF3023	0.77	+1.2
3,096,891	-		GFF3023	0.78	-1.5
3,096,891	-		GFF3023	0.78	+0.6
3,096,891	-		GFF3023	0.78	-0.9
3,096,891	-		GFF3023	0.78	+0.9
3,096,891	-		GFF3023	0.78	-2.5
3,096,910	+		GFF3023	0.78	-0.3
3,096,910	+		GFF3023	0.78	-2.3
3,096,916	-		GFF3023	0.78	-2.5
3,096,918	-		GFF3023	0.78	+0.1
3,096,918	-		GFF3023	0.78	+0.8
3,096,918	-		GFF3023	0.78	+0.2
3,096,918	-		GFF3023	0.78	-0.9
3,096,918	-		GFF3023	0.78	+0.4
3,096,945	+		GFF3023	0.79	+0.2
3,096,947	+		GFF3023	0.79	-0.5
3,096,947	+		GFF3023	0.79	-0.1
3,096,947	+		GFF3023	0.79	-0.8
3,096,947	+		GFF3023	0.79	+0.1
3,096,950	-		GFF3023	0.79	+1.2
3,096,954	+		GFF3023	0.80	+0.2
3,096,954	+		GFF3023	0.80	+0.3
3,096,954	+		GFF3023	0.80	-0.1
3,096,954	+		GFF3023	0.80	+0.2
3,096,954	+		GFF3023	0.80	-0.2
3,096,955	-		GFF3023	0.80	+1.1
3,096,955	-		GFF3023	0.80	-1.3
3,096,955	-		GFF3023	0.80	-1.7
3,096,962	-		GFF3023	0.80	-1.2
3,096,962	-		GFF3023	0.80	-1.0
3,096,962	-		GFF3023	0.80	+1.1
3,096,962	-		GFF3023	0.80	-1.0
3,096,962	-		GFF3023	0.80	+0.1
3,096,962	-		GFF3023	0.80	+1.1
3,096,962	-		GFF3023	0.80	-0.6
3,096,962	-		GFF3023	0.80	-2.1
3,096,962	-		GFF3023	0.80	+0.5
3,096,962	-		GFF3023	0.80	-0.6
3,096,969	-		GFF3023	0.80	+0.5
3,096,976	+		GFF3023	0.80	-1.3
3,097,018	+		GFF3023	0.82	+0.4
3,097,018	+		GFF3023	0.82	+0.4
3,097,018	+		GFF3023	0.82	+0.8
3,097,018	+		GFF3023	0.82	+0.5
3,097,018	+		GFF3023	0.82	-0.3
3,097,018	+		GFF3023	0.82	+1.0
3,097,018	+		GFF3023	0.82	+1.0
3,097,026	-		GFF3023	0.82	-0.2
3,097,026	-		GFF3023	0.82	-0.4
3,097,026	-		GFF3023	0.82	-0.4
3,097,026	-		GFF3023	0.82	-0.5
3,097,026	-		GFF3023	0.82	-0.7
3,097,026	-		GFF3023	0.82	+0.4
3,097,026	-		GFF3023	0.82	-0.2
3,097,026	-		GFF3023	0.82	+0.4
3,097,032	-		GFF3023	0.82	-0.6
3,097,032	-		GFF3023	0.82	+0.2
3,097,060	+		GFF3023	0.83	+1.1
3,097,060	+		GFF3023	0.83	-1.3
3,097,060	+		GFF3023	0.83	-1.7
3,097,081	-		GFF3023	0.84	-0.6
3,097,082	-		GFF3023	0.84	-0.6
3,097,085	+		GFF3023	0.84	-0.2
3,097,087	-		GFF3023	0.84	+0.4
3,097,105	+		GFF3023	0.84	+0.5
3,097,106	+		GFF3023	0.84	-0.2
3,097,114	+		GFF3023	0.85	-1.0
3,097,130	+		GFF3023	0.85	-1.7
3,097,144	+		GFF3023	0.86	+0.7
3,097,149	+		GFF3023	0.86	-0.4
3,097,157	-		GFF3023	0.86	-0.4
3,097,157	-		GFF3023	0.86	-0.2
3,097,157	-		GFF3023	0.86	+0.6
3,097,165	+		GFF3023	0.86	-1.5
3,097,178	-		GFF3023	0.87	-1.5
3,097,187	+		GFF3023	0.87	+1.2
3,097,200	-		GFF3023	0.87	-1.1
3,097,221	-		GFF3023	0.88	+0.7
3,097,221	-		GFF3023	0.88	-1.8
3,097,221	-		GFF3023	0.88	+0.7
3,097,224	+		GFF3023	0.88	-0.0
3,097,224	+		GFF3023	0.88	+0.4
3,097,224	+		GFF3023	0.88	-0.1
3,097,224	+		GFF3023	0.88	-0.8
3,097,224	+		GFF3023	0.88	-0.3
3,097,224	+		GFF3023	0.88	+0.3
3,097,224	+		GFF3023	0.88	-0.2
3,097,224	+		GFF3023	0.88	-1.9
3,097,224	+		GFF3023	0.88	-0.3
3,097,224	+		GFF3023	0.88	-2.8
3,097,224	+		GFF3023	0.88	+0.4
3,097,224	+		GFF3023	0.88	-0.8
3,097,224	+		GFF3023	0.88	-0.1
3,097,224	+		GFF3023	0.88	-0.2
3,097,224	+		GFF3023	0.88	-0.1
3,097,224	+		GFF3023	0.88	+1.1
3,097,224	+		GFF3023	0.88	+1.3
3,097,224	+		GFF3023	0.88	+0.2
3,097,224	+		GFF3023	0.88	-1.2
3,097,224	+		GFF3023	0.88	-0.3
3,097,224	+		GFF3023	0.88	-0.3
3,097,224	+		GFF3023	0.88	-0.1
3,097,224	+		GFF3023	0.88	+0.3
3,097,224	+		GFF3023	0.88	+0.5
3,097,224	+		GFF3023	0.88	-0.7
3,097,224	+		GFF3023	0.88	+0.4
3,097,224	+		GFF3023	0.88	+0.5
3,097,224	+		GFF3023	0.88	-0.3
3,097,224	+		GFF3023	0.88	-0.7
3,097,224	+		GFF3023	0.88	-1.7
3,097,229	+		GFF3023	0.88	+0.6
3,097,229	+		GFF3023	0.88	-0.6
3,097,232	-		GFF3023	0.88	-1.2
3,097,232	-		GFF3023	0.88	-1.3
3,097,232	-		GFF3023	0.88	-1.0
3,097,232	-		GFF3023	0.88	+0.4
3,097,232	-		GFF3023	0.88	+0.3
3,097,232	-		GFF3023	0.88	-0.9
3,097,232	-		GFF3023	0.88	+0.2
3,097,232	-		GFF3023	0.88	+0.5
3,097,232	-		GFF3023	0.88	-1.2
3,097,232	-		GFF3023	0.88	-0.1
3,097,232	-		GFF3023	0.88	-1.6
3,097,232	-		GFF3023	0.88	-0.4
3,097,232	-		GFF3023	0.88	-1.7
3,097,232	-		GFF3023	0.88	-0.5
3,097,232	-		GFF3023	0.88	-1.1
3,097,232	-		GFF3023	0.88	-1.6
3,097,232	-		GFF3023	0.88	+0.5
3,097,232	-		GFF3023	0.88	-1.8
3,097,232	-		GFF3023	0.88	+0.1
3,097,232	-		GFF3023	0.88	+1.0
3,097,244	+		GFF3023	0.89	+0.3
3,097,254	+		GFF3023	0.89	+0.9
3,097,257	-		GFF3023	0.89	-1.5
3,097,271	+		GFF3023	0.89	-0.4
3,097,279	-		GFF3023	0.90	-0.7
3,097,279	-		GFF3023	0.90	+0.2
3,097,279	-		GFF3023	0.90	+2.0
3,097,279	-		GFF3023	0.90	-1.6
3,097,319	+				+0.2
3,097,319	+				-0.4
3,097,323	+				-0.2
3,097,328	+				-1.4
3,097,342	+				-1.2
3,097,342	+				-0.5
3,097,342	+				-0.4
3,097,342	+				-1.1
3,097,342	+				-0.7
3,097,350	-				-1.5
3,097,350	-				+0.4
3,097,350	-				+0.7
3,097,350	-				-1.0
3,097,352	+				-1.5
3,097,355	-				-1.8
3,097,368	-				-1.3
3,097,368	-				-0.0
3,097,370	+				-0.2
3,097,385	+				-1.3
3,097,385	+				+0.4
3,097,385	+				-0.3
3,097,385	+				+1.5
3,097,385	+				-0.2
3,097,385	+				+0.6
3,097,388	-				-0.1
3,097,393	-				-2.0
3,097,393	-				+0.1
3,097,393	-				-0.3
3,097,393	-				-0.4
3,097,425	+				+1.2
3,097,425	+				+1.3
3,097,430	+				-0.0
3,097,431	+				-1.2
3,097,431	+				+0.4
3,097,438	-				-0.7
3,097,438	-				+0.7
3,097,439	-				-0.9
3,097,439	-				-1.2
3,097,439	-				-0.4
3,097,450	-				+0.5
3,097,466	+				-0.2
3,097,471	+				-1.7
3,097,471	+				-1.2
3,097,474	-				-0.1
3,097,476	-				-1.9
3,097,481	+				+0.1
3,097,490	+				+0.4
3,097,490	+				+0.2
3,097,490	+				+0.1
3,097,498	-				+0.3
3,097,514	+				-1.4
3,097,517	-				-0.4
3,097,521	+				-1.9
3,097,529	+				-0.4
3,097,543	-				+1.1
3,097,560	+				-1.6
3,097,570	+				-0.4
3,097,595	+				+0.5
3,097,595	+				-1.2
3,097,600	+				-1.8
3,097,603	-				+0.3
3,097,605	+				-1.4
3,097,605	+				-0.6
3,097,605	+				+0.0
3,097,607	+				-0.8
3,097,607	+				+0.8
3,097,607	+				-1.4
3,097,613	-				-0.9
3,097,615	-				-1.5
3,097,624	+				+0.5
3,097,634	+				-1.0
3,097,634	+				+0.6
3,097,646	-				-0.3
3,097,646	-				-2.2
3,097,675	+				-0.9
3,097,683	-				+1.2
3,097,724	+		GFF3024	0.10	+0.4
3,097,724	+		GFF3024	0.10	-1.8
3,097,724	+		GFF3024	0.10	-0.4
3,097,732	-		GFF3024	0.11	-1.1
3,097,735	+		GFF3024	0.11	-0.4
3,097,743	-		GFF3024	0.12	+0.4
3,097,767	+		GFF3024	0.14	-0.7
3,097,773	-		GFF3024	0.14	+0.2
3,097,773	-		GFF3024	0.14	+0.6
3,097,778	-		GFF3024	0.15	-0.2
3,097,785	+		GFF3024	0.15	-0.4
3,097,795	-		GFF3024	0.16	-1.7
3,097,812	+		GFF3024	0.18	-1.4
3,097,819	+		GFF3024	0.18	-0.1
3,097,819	+		GFF3024	0.18	-0.8
3,097,819	-		GFF3024	0.18	+1.3
3,097,820	-		GFF3024	0.18	+0.0
3,097,827	-		GFF3024	0.19	+1.0
3,097,837	-		GFF3024	0.20	-2.3
3,097,839	+		GFF3024	0.20	+0.0
3,097,839	+		GFF3024	0.20	+0.6
3,097,844	+		GFF3024	0.20	-0.3
3,097,845	+		GFF3024	0.20	-1.1
3,097,845	+		GFF3024	0.20	+0.6
3,097,845	+		GFF3024	0.20	-3.0
3,097,845	+		GFF3024	0.20	-0.2
3,097,845	+		GFF3024	0.20	+0.4
3,097,847	-		GFF3024	0.21	-0.8
3,097,853	-		GFF3024	0.21	-0.1
3,097,853	-		GFF3024	0.21	+0.0
3,097,853	-		GFF3024	0.21	-0.7
3,097,853	-		GFF3024	0.21	-0.1
3,097,853	-		GFF3024	0.21	-1.7
3,097,853	-		GFF3024	0.21	+1.4
3,097,929	+		GFF3024	0.27	+1.0
3,097,937	-		GFF3024	0.28	+0.0
3,098,000	-		GFF3024	0.33	-0.9
3,098,043	-		GFF3024	0.37	+0.5
3,098,058	-		GFF3024	0.38	+0.4
3,098,074	+		GFF3024	0.39	-1.7
3,098,081	-		GFF3024	0.40	+0.1
3,098,124	+		GFF3024	0.44	-0.2
3,098,129	+		GFF3024	0.44	-0.2
3,098,129	+		GFF3024	0.44	-1.0
3,098,129	+		GFF3024	0.44	-0.1
3,098,135	-		GFF3024	0.44	-0.2
3,098,137	-		GFF3024	0.45	+0.0
3,098,137	-		GFF3024	0.45	-1.4
3,098,137	-		GFF3024	0.45	-0.9
3,098,139	+		GFF3024	0.45	+0.1
3,098,144	+		GFF3024	0.45	+0.6
3,098,144	+		GFF3024	0.45	+1.0
3,098,150	+		GFF3024	0.46	+0.0
3,098,150	+		GFF3024	0.46	+1.2
3,098,158	-		GFF3024	0.46	-1.1
3,098,159	+		GFF3024	0.46	+0.7
3,098,167	-		GFF3024	0.47	+0.2
3,098,169	+		GFF3024	0.47	+0.2
3,098,174	+		GFF3024	0.48	-2.7
3,098,175	+		GFF3024	0.48	-1.2
3,098,183	-		GFF3024	0.48	-0.5
3,098,189	+		GFF3024	0.49	+0.0
3,098,204	-		GFF3024	0.50	-0.7
3,098,221	+		GFF3024	0.52	+0.7
3,098,221	+		GFF3024	0.52	-0.1
3,098,226	+		GFF3024	0.52	+0.9
3,098,226	+		GFF3024	0.52	-1.1
3,098,226	+		GFF3024	0.52	-1.7
3,098,227	-		GFF3024	0.52	+0.9
3,098,229	-		GFF3024	0.52	+0.8
3,098,234	-		GFF3024	0.53	+0.2
3,098,234	-		GFF3024	0.53	-0.1
3,098,239	+		GFF3024	0.53	-0.7
3,098,239	+		GFF3024	0.53	+0.0
3,098,247	+		GFF3024	0.54	-1.0
3,098,247	-		GFF3024	0.54	-0.6
3,098,265	+		GFF3024	0.55	-0.0
3,098,268	-		GFF3024	0.55	-0.5
3,098,270	+		GFF3024	0.56	+0.3
3,098,271	+		GFF3024	0.56	+0.6
3,098,279	-		GFF3024	0.56	-0.0
3,098,322	+		GFF3024	0.60	-0.8
3,098,327	+		GFF3024	0.60	+1.2
3,098,330	-		GFF3024	0.61	-0.4
3,098,335	-		GFF3024	0.61	-1.0
3,098,335	-		GFF3024	0.61	-1.2
3,098,335	-		GFF3024	0.61	-0.3
3,098,337	+		GFF3024	0.61	+0.2
3,098,351	+		GFF3024	0.62	-0.7
3,098,359	+		GFF3024	0.63	+0.6
3,098,364	+		GFF3024	0.63	-1.1
3,098,364	+		GFF3024	0.63	-0.1
3,098,365	+		GFF3024	0.64	-0.6
3,098,365	+		GFF3024	0.64	+0.7
3,098,367	-		GFF3024	0.64	-1.1
3,098,373	-		GFF3024	0.64	+1.4
3,098,373	-		GFF3024	0.64	-2.2
3,098,373	-		GFF3024	0.64	+0.2
3,098,373	-		GFF3024	0.64	-0.3
3,098,395	+		GFF3024	0.66	+0.8
3,098,403	-		GFF3024	0.67	-0.4
3,098,414	-		GFF3024	0.68	+0.4
3,098,419	+		GFF3024	0.68	-1.4
3,098,419	+		GFF3024	0.68	-0.6
3,098,419	+		GFF3024	0.68	-0.8
3,098,427	-		GFF3024	0.69	+0.8
3,098,439	-		GFF3024	0.70	-2.7
3,098,441	+		GFF3024	0.70	+0.8
3,098,441	+		GFF3024	0.70	-0.4
3,098,441	+		GFF3024	0.70	+0.2
3,098,441	+		GFF3024	0.70	-3.2
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3,098,737	-				-1.5
3,098,754	-				-1.0
3,098,754	-				-0.2
3,098,762	-				-0.7
3,098,762	-				+0.1
3,098,775	+				-0.9
3,098,824	+				-1.2
3,098,824	+				-0.6
3,098,842	+				+1.1
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3,098,873	-				-0.0
3,098,881	-				-1.4
3,098,884	+				+1.1
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3,098,884	+				+1.0
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3,098,884	+				+1.1
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3,098,892	-				-2.1
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3,098,892	-				+1.7
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