Strain Fitness in Sphingobium sp. HT1-2 around GFF2775

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,807,339	+		GFF2774	0.61	-0.2
2,807,339	+		GFF2774	0.61	+0.8
2,807,346	+		GFF2774	0.61	+0.4
2,807,346	+		GFF2774	0.61	+1.2
2,807,347	-		GFF2774	0.61	-0.8
2,807,356	+		GFF2774	0.62	-0.1
2,807,356	+		GFF2774	0.62	+0.0
2,807,356	+		GFF2774	0.62	-0.7
2,807,369	+		GFF2774	0.62	+0.6
2,807,373	-		GFF2774	0.63	-0.2
2,807,377	-		GFF2774	0.63	-0.2
2,807,397	+		GFF2774	0.64	+0.8
2,807,397	+		GFF2774	0.64	+0.8
2,807,397	+		GFF2774	0.64	-0.7
2,807,405	-		GFF2774	0.64	-0.8
2,807,405	-		GFF2774	0.64	+0.5
2,807,405	-		GFF2774	0.64	-1.5
2,807,405	-		GFF2774	0.64	+0.4
2,807,405	-		GFF2774	0.64	-0.7
2,807,407	+		GFF2774	0.64	-1.1
2,807,412	+		GFF2774	0.64	-0.5
2,807,412	+		GFF2774	0.64	+1.9
2,807,412	+		GFF2774	0.64	-0.6
2,807,412	+		GFF2774	0.64	-0.3
2,807,412	+		GFF2774	0.64	+0.6
2,807,412	+		GFF2774	0.64	+1.9
2,807,415	-		GFF2774	0.64	+1.4
2,807,419	+		GFF2774	0.64	+0.4
2,807,420	-		GFF2774	0.65	+0.7
2,807,420	-		GFF2774	0.65	+0.3
2,807,420	-		GFF2774	0.65	-2.1
2,807,465	+		GFF2774	0.66	-1.8
2,807,465	+		GFF2774	0.66	+1.6
2,807,465	+		GFF2774	0.66	-0.2
2,807,465	+		GFF2774	0.66	-0.7
2,807,465	+		GFF2774	0.66	-0.6
2,807,473	-		GFF2774	0.67	+0.3
2,807,473	-		GFF2774	0.67	-0.1
2,807,473	-		GFF2774	0.67	+1.9
2,807,482	+		GFF2774	0.67	+0.0
2,807,527	+		GFF2774	0.69	+0.3
2,807,535	-		GFF2774	0.69	+0.2
2,807,543	+		GFF2774	0.70	-0.0
2,807,546	-		GFF2774	0.70	+0.8
2,807,575	-		GFF2774	0.71	+0.1
2,807,590	-		GFF2774	0.72	-1.1
2,807,640	-		GFF2774	0.74	-0.5
2,807,743	+		GFF2774	0.78	+0.4
2,807,790	+		GFF2774	0.80	-0.9
2,807,798	-		GFF2774	0.81	+0.6
2,807,810	+		GFF2774	0.81	+0.3
2,807,825	+		GFF2774	0.82	-0.6
2,807,834	-		GFF2774	0.82	-1.1
2,807,834	-		GFF2774	0.82	+0.0
2,807,878	+		GFF2774	0.84	+0.4
2,807,928	+		GFF2774	0.86	+0.2
2,807,941	-		GFF2774	0.87	-3.6
2,807,941	-		GFF2774	0.87	-0.4
2,807,941	-		GFF2774	0.87	+0.5
2,807,982	+		GFF2774	0.89	+1.1
2,807,997	+		GFF2774	0.89	+1.0
2,807,997	+		GFF2774	0.89	-0.0
2,807,997	+		GFF2774	0.89	-1.2
2,808,005	-		GFF2774	0.90	-0.0
2,808,034	+				-0.8
2,808,056	-				+2.5
2,808,056	-				-1.8
2,808,058	+				-0.5
2,808,058	+				-0.3
2,808,058	+				+0.7
2,808,058	+				-0.1
2,808,058	+				-1.4
2,808,058	+				-0.9
2,808,058	+				-0.2
2,808,059	+				+0.1
2,808,066	-				+1.4
2,808,066	-				-0.3
2,808,066	-				+0.6
2,808,066	-				-0.6
2,808,066	-				-0.1
2,808,131	-				+0.7
2,808,136	-				+1.4
2,808,136	-				+0.4
2,808,154	+				-2.2
2,808,165	+				-1.6
2,808,165	+				-0.6
2,808,173	-				+1.3
2,808,173	-				+2.2
2,808,173	-				-0.3
2,808,173	-				+2.0
2,808,188	-				+0.2
2,808,188	-				-0.2
2,808,188	-				+0.6
2,808,200	-				-1.1
2,808,212	+				+0.2
2,808,212	+				-1.2
2,808,212	+				-0.3
2,808,212	+				+0.1
2,808,212	+				+0.2
2,808,212	+				-0.5
2,808,215	-				-2.8
2,808,220	-				+0.5
2,808,220	-				-2.8
2,808,220	-				-0.9
2,808,220	-				-0.3
2,808,220	-				-0.1
2,808,220	-				-0.9
2,808,220	-				-0.3
2,808,220	-				-0.2
2,808,220	-				-1.9
2,808,235	-				+1.0
2,808,239	+				+0.4
2,808,247	-				-1.9
2,808,252	-				+1.1
2,808,253	+				+0.6
2,808,256	-				-0.2
2,808,257	-				+0.2
2,808,257	-				-1.5
2,808,278	+				-0.3
2,808,286	-				+0.4
2,808,286	-				-0.9
2,808,304	+				-0.1
2,808,304	+				-2.0
2,808,311	+				-0.9
2,808,312	-				+0.9
2,808,337	+				+0.2
2,808,407	-				+0.2
2,808,407	-				+1.0
2,808,413	-				+0.2
2,808,417	+				+0.2
2,808,422	+				+1.2
2,808,462	+				-0.9
2,808,477	+				-0.5
2,808,477	+				-0.2
2,808,477	+				+1.8
2,808,477	+				-0.1
2,808,477	+				-0.3
2,808,480	-				+1.1
2,808,485	-				+0.5
2,808,485	-				+0.7
2,808,485	-				-0.7
2,808,487	+				+0.1
2,808,487	+				+0.8
2,808,487	+				+0.7
2,808,498	+				+1.3
2,808,544	-		GFF2775	0.11	-1.6
2,808,550	+		GFF2775	0.11	-0.1
2,808,550	+		GFF2775	0.11	-1.2
2,808,558	-		GFF2775	0.12	-0.9
2,808,563	+		GFF2775	0.12	+0.1
2,808,563	+		GFF2775	0.12	+0.1
2,808,571	-		GFF2775	0.12	-1.7
2,808,583	+		GFF2775	0.13	-0.7
2,808,586	+		GFF2775	0.13	-0.3
2,808,602	+		GFF2775	0.14	-0.2
2,808,625	-		GFF2775	0.15	-0.0
2,808,631	-		GFF2775	0.15	-1.2
2,808,632	-		GFF2775	0.15	+1.2
2,808,633	-		GFF2775	0.15	+0.6
2,808,642	+		GFF2775	0.16	-0.3
2,808,659	-		GFF2775	0.17	+0.0
2,808,698	-		GFF2775	0.19	-0.3
2,808,854	+		GFF2775	0.27	+0.7
2,808,862	-		GFF2775	0.27	-1.8
2,808,862	-		GFF2775	0.27	+0.0
2,808,864	+		GFF2775	0.27	-0.2
2,808,864	+		GFF2775	0.27	-1.3
2,808,864	+		GFF2775	0.27	-1.7
2,808,864	+		GFF2775	0.27	+0.6
2,808,864	+		GFF2775	0.27	-0.6
2,808,879	+		GFF2775	0.28	+0.2
2,808,879	+		GFF2775	0.28	-0.6
2,808,879	+		GFF2775	0.28	+1.6
2,808,879	+		GFF2775	0.28	+1.4
2,808,879	+		GFF2775	0.28	+0.7
2,808,879	+		GFF2775	0.28	+0.7
2,808,879	+		GFF2775	0.28	+0.4
2,808,879	+		GFF2775	0.28	-1.1
2,808,879	+		GFF2775	0.28	+0.4
2,808,879	+		GFF2775	0.28	+1.6
2,808,879	+		GFF2775	0.28	-0.0
2,808,879	+		GFF2775	0.28	+0.7
2,808,879	+		GFF2775	0.28	-1.5
2,808,879	+		GFF2775	0.28	+0.1
2,808,879	+		GFF2775	0.28	+1.1
2,808,887	-		GFF2775	0.28	-0.3
2,808,887	-		GFF2775	0.28	+0.6
2,808,887	-		GFF2775	0.28	-0.8
2,808,887	-		GFF2775	0.28	-0.3
2,808,887	-		GFF2775	0.28	-1.7
2,808,887	-		GFF2775	0.28	+0.2
2,808,887	-		GFF2775	0.28	-0.2
2,808,887	-		GFF2775	0.28	-0.1
2,808,887	-		GFF2775	0.28	-1.7
2,808,887	-		GFF2775	0.28	+0.0
2,808,887	-		GFF2775	0.28	-0.6
2,808,905	+		GFF2775	0.29	-0.0
2,808,928	-		GFF2775	0.30	+1.5
2,808,928	-		GFF2775	0.30	+1.1
2,808,928	-		GFF2775	0.30	+0.8
2,808,928	-		GFF2775	0.30	+0.2
2,808,928	-		GFF2775	0.30	+1.0
2,808,928	-		GFF2775	0.30	-1.6
2,808,963	-		GFF2775	0.32	+1.0
2,808,998	-		GFF2775	0.34	+1.2
2,808,998	-		GFF2775	0.34	-0.7
2,808,998	-		GFF2775	0.34	+0.6
2,809,005	-		GFF2775	0.34	+0.5
2,809,005	-		GFF2775	0.34	-1.2
2,809,005	-		GFF2775	0.34	+0.3
2,809,048	+		GFF2775	0.37	+1.8
2,809,101	-		GFF2775	0.39	+0.0
2,809,126	+		GFF2775	0.41	-1.2
2,809,161	+		GFF2775	0.42	+0.6
2,809,190	+		GFF2775	0.44	+0.4
2,809,191	+		GFF2775	0.44	-0.3
2,809,191	+		GFF2775	0.44	+0.1
2,809,191	+		GFF2775	0.44	+0.0
2,809,196	-		GFF2775	0.44	-0.2
2,809,199	-		GFF2775	0.44	+1.3
2,809,199	-		GFF2775	0.44	-0.6
2,809,233	+		GFF2775	0.46	+0.4
2,809,233	+		GFF2775	0.46	-1.3
2,809,233	+		GFF2775	0.46	-0.2
2,809,233	+		GFF2775	0.46	+0.1
2,809,258	+		GFF2775	0.47	-0.0
2,809,276	+		GFF2775	0.48	+0.9
2,809,284	-		GFF2775	0.49	+0.8
2,809,284	-		GFF2775	0.49	+1.0
2,809,302	-		GFF2775	0.50	-2.3
2,809,304	+		GFF2775	0.50	-0.2
2,809,304	+		GFF2775	0.50	-1.3
2,809,304	-		GFF2775	0.50	-0.3
2,809,328	-		GFF2775	0.51	-0.0
2,809,342	+		GFF2775	0.52	-0.9
2,809,347	-		GFF2775	0.52	-0.1
2,809,349	+		GFF2775	0.52	+0.5
2,809,352	-		GFF2775	0.52	+0.2
2,809,357	-		GFF2775	0.52	+0.7
2,809,357	-		GFF2775	0.52	+0.5
2,809,385	+		GFF2775	0.54	-0.4
2,809,385	+		GFF2775	0.54	-0.5
2,809,385	+		GFF2775	0.54	-0.6
2,809,393	-		GFF2775	0.54	+0.5
2,809,408	+		GFF2775	0.55	-0.9
2,809,413	+		GFF2775	0.55	+1.2
2,809,420	+		GFF2775	0.56	+0.2
2,809,420	+		GFF2775	0.56	+1.1
2,809,428	-		GFF2775	0.56	-1.1
2,809,432	+		GFF2775	0.56	-1.0
2,809,432	+		GFF2775	0.56	+0.1
2,809,432	+		GFF2775	0.56	-0.2
2,809,434	-		GFF2775	0.56	+0.7
2,809,435	-		GFF2775	0.56	-0.8
2,809,437	+		GFF2775	0.56	-0.1
2,809,440	-		GFF2775	0.57	-0.2
2,809,445	-		GFF2775	0.57	-0.1
2,809,445	-		GFF2775	0.57	-1.7
2,809,445	-		GFF2775	0.57	+0.7
2,809,473	+		GFF2775	0.58	-0.5
2,809,473	+		GFF2775	0.58	-0.3
2,809,473	+		GFF2775	0.58	+0.1
2,809,473	+		GFF2775	0.58	-1.0
2,809,473	+		GFF2775	0.58	-0.8
2,809,473	+		GFF2775	0.58	+0.1
2,809,473	+		GFF2775	0.58	-1.3
2,809,473	+		GFF2775	0.58	+1.0
2,809,473	+		GFF2775	0.58	-3.5
2,809,473	+		GFF2775	0.58	-0.8
2,809,481	-		GFF2775	0.59	-0.5
2,809,481	-		GFF2775	0.59	+1.7
2,809,481	-		GFF2775	0.59	-0.3
2,809,481	-		GFF2775	0.59	+0.1
2,809,481	-		GFF2775	0.59	-1.2
2,809,481	-		GFF2775	0.59	+0.2
2,809,481	-		GFF2775	0.59	+0.7
2,809,481	-		GFF2775	0.59	-0.5
2,809,481	-		GFF2775	0.59	+0.5
2,809,481	-		GFF2775	0.59	-0.2
2,809,481	-		GFF2775	0.59	+1.4
2,809,492	+		GFF2775	0.59	-0.1
2,809,492	+		GFF2775	0.59	-0.0
2,809,499	+		GFF2775	0.60	+2.0
2,809,500	+		GFF2775	0.60	-1.4
2,809,505	-		GFF2775	0.60	+1.1
2,809,508	-		GFF2775	0.60	-2.5
2,809,527	+		GFF2775	0.61	-0.3
2,809,558	-		GFF2775	0.63	+1.7
2,809,584	-		GFF2775	0.64	-2.2
2,809,589	-		GFF2775	0.64	+0.9
2,809,597	-		GFF2775	0.65	-0.3
2,809,633	+		GFF2775	0.66	+0.1
2,809,654	-		GFF2775	0.67	-1.5
2,809,655	+		GFF2775	0.68	-0.6
2,809,659	-		GFF2775	0.68	+1.1
2,809,726	-		GFF2775	0.71	-0.3
2,809,826	+		GFF2775	0.76	-1.6
2,809,916	+		GFF2775	0.81	-1.3
2,809,932	-		GFF2775	0.82	-0.4
2,809,971	-		GFF2775	0.84	+0.1
2,809,971	-		GFF2775	0.84	+0.7
2,809,998	-		GFF2775	0.85	+0.0
2,810,063	+		GFF2775	0.88	+0.7
2,810,073	-		GFF2775	0.89	+0.9
2,810,083	-		GFF2775	0.89	+0.4
2,810,118	-				-0.2
2,810,128	-				+0.2
2,810,135	+				-1.6
2,810,155	-				+0.4
2,810,155	-				-0.3
2,810,156	-				+0.1
2,810,156	-				+0.4
2,810,178	-				+0.9
2,810,243	+				-0.9
2,810,243	+				-1.6
2,810,248	+				+2.0
2,810,268	+				-2.1
2,810,321	+				+1.2
2,810,333	+				-0.3
2,810,334	+				-0.5
2,810,334	+				-1.6
2,810,339	+				-1.1
2,810,340	-				+0.2
2,810,352	-				-0.3
2,810,353	+				-1.7
2,810,357	-				-0.6
2,810,374	+				-0.9
2,810,378	+				+0.1
2,810,405	-				+0.2
2,810,456	+				+1.2
2,810,462	-				-1.2
2,810,464	-				+0.2
2,810,480	+				+0.7
2,810,481	-				-0.5
2,810,481	-				-0.7
2,810,493	-				-1.9
2,810,493	-				+0.2
2,810,500	-				+0.7
2,810,516	+		GFF2776	0.11	+1.2
2,810,521	+		GFF2776	0.11	-0.7
2,810,524	-		GFF2776	0.11	+1.2
2,810,524	-		GFF2776	0.11	-0.2
2,810,526	+		GFF2776	0.11	+0.6
2,810,546	-		GFF2776	0.12	-0.2
2,810,566	-		GFF2776	0.13	-0.3
2,810,566	-		GFF2776	0.13	-2.1
2,810,649	+		GFF2776	0.17	-0.9
2,810,655	+		GFF2776	0.17	+0.7
2,810,709	+		GFF2776	0.20	-1.1
2,810,717	-		GFF2776	0.20	-0.8
2,810,751	+		GFF2776	0.22	+0.6
2,810,776	-		GFF2776	0.23	-0.5
2,810,801	+		GFF2776	0.25	+1.6
2,810,821	+		GFF2776	0.26	-1.0
2,810,839	-		GFF2776	0.26	-2.3
2,810,847	+		GFF2776	0.27	+0.5
2,810,859	+		GFF2776	0.27	+0.2
2,810,867	-		GFF2776	0.28	+0.1
2,810,867	-		GFF2776	0.28	+0.2
2,810,867	-		GFF2776	0.28	+0.4
2,810,875	-		GFF2776	0.28	+2.0
2,810,875	-		GFF2776	0.28	+0.2
2,810,875	-		GFF2776	0.28	-0.2
2,810,883	+		GFF2776	0.29	-1.9
2,810,884	+		GFF2776	0.29	-0.6
2,810,890	-		GFF2776	0.29	-1.0
2,810,892	-		GFF2776	0.29	+0.4
2,810,907	-		GFF2776	0.30	+0.5
2,810,909	-		GFF2776	0.30	-3.0
2,810,930	+		GFF2776	0.31	+1.0
2,810,956	-		GFF2776	0.32	+0.2
2,810,966	-		GFF2776	0.33	+0.8
2,810,981	-		GFF2776	0.33	-0.2
2,810,996	-		GFF2776	0.34	+1.4
2,811,037	+		GFF2776	0.36	+1.2
2,811,037	+		GFF2776	0.36	-0.4
2,811,037	+		GFF2776	0.36	-0.1
2,811,062	+		GFF2776	0.37	-1.9
2,811,062	+		GFF2776	0.37	-0.5
2,811,064	-		GFF2776	0.38	+0.3
2,811,075	+		GFF2776	0.38	-0.2
2,811,083	-		GFF2776	0.39	-0.6
2,811,210	-		GFF2776	0.45	+0.1
2,811,215	-		GFF2776	0.45	-1.0
2,811,270	+		GFF2776	0.48	+1.5