Strain Fitness in Sphingobium sp. HT1-2 around GFF2770

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,802,400	+		GFF2769	0.19	+0.3
2,802,406	-		GFF2769	0.20	-2.0
2,802,410	+		GFF2769	0.20	-1.1
2,802,441	-		GFF2769	0.22	+1.1
2,802,492	-		GFF2769	0.27	+0.8
2,802,492	-		GFF2769	0.27	-1.3
2,802,506	+		GFF2769	0.28	-1.0
2,802,506	+		GFF2769	0.28	-1.7
2,802,506	+		GFF2769	0.28	-1.1
2,802,510	+		GFF2769	0.28	+0.6
2,802,511	+		GFF2769	0.28	+0.1
2,802,514	-		GFF2769	0.29	+0.2
2,802,514	-		GFF2769	0.29	-0.8
2,802,519	-		GFF2769	0.29	-0.9
2,802,540	+		GFF2769	0.31	-2.4
2,802,540	+		GFF2769	0.31	+0.7
2,802,548	-		GFF2769	0.32	+0.8
2,802,548	-		GFF2769	0.32	-0.3
2,802,578	+		GFF2769	0.34	+0.0
2,802,581	-		GFF2769	0.34	-1.8
2,802,581	-		GFF2769	0.34	+1.3
2,802,622	+		GFF2769	0.38	-0.6
2,802,630	-		GFF2769	0.39	+0.3
2,802,632	+		GFF2769	0.39	-0.0
2,802,664	+		GFF2769	0.41	-1.6
2,802,680	-		GFF2769	0.43	-0.0
2,802,688	+		GFF2769	0.43	+0.9
2,802,696	-		GFF2769	0.44	-0.3
2,802,713	+		GFF2769	0.46	-3.1
2,802,713	+		GFF2769	0.46	+0.4
2,802,713	+		GFF2769	0.46	-0.7
2,802,715	-		GFF2769	0.46	-0.1
2,802,721	-		GFF2769	0.46	-0.2
2,802,721	-		GFF2769	0.46	-0.5
2,802,797	-		GFF2769	0.53	-0.3
2,802,816	+		GFF2769	0.54	-0.5
2,802,833	+		GFF2769	0.56	-0.1
2,802,884	-		GFF2769	0.60	-0.9
2,802,910	+		GFF2769	0.62	-2.1
2,802,915	+		GFF2769	0.63	-0.8
2,802,918	-		GFF2769	0.63	+0.7
2,802,925	+		GFF2769	0.64	-1.6
2,802,925	+		GFF2769	0.64	-1.3
2,802,925	+		GFF2769	0.64	-1.8
2,802,925	+		GFF2769	0.64	-3.0
2,802,925	+		GFF2769	0.64	-0.5
2,802,925	+		GFF2769	0.64	-0.0
2,802,925	+		GFF2769	0.64	+0.5
2,802,925	+		GFF2769	0.64	-0.5
2,802,925	+		GFF2769	0.64	+0.3
2,802,925	+		GFF2769	0.64	-0.6
2,802,925	+		GFF2769	0.64	-0.1
2,802,925	+		GFF2769	0.64	+1.7
2,802,925	+		GFF2769	0.64	+0.6
2,802,925	+		GFF2769	0.64	-0.7
2,802,928	-		GFF2769	0.64	+0.7
2,802,933	-		GFF2769	0.64	+1.1
2,802,933	-		GFF2769	0.64	-0.8
2,802,933	-		GFF2769	0.64	-1.6
2,802,933	-		GFF2769	0.64	-0.3
2,802,933	-		GFF2769	0.64	+1.0
2,802,933	-		GFF2769	0.64	-1.1
2,802,933	-		GFF2769	0.64	-2.1
2,802,933	-		GFF2769	0.64	+0.3
2,802,933	-		GFF2769	0.64	+0.4
2,802,933	-		GFF2769	0.64	-0.8
2,802,933	-		GFF2769	0.64	-0.8
2,802,933	-		GFF2769	0.64	-1.1
2,802,933	-		GFF2769	0.64	-1.6
2,802,933	-		GFF2769	0.64	+0.5
2,802,933	-		GFF2769	0.64	+0.6
2,802,933	-		GFF2769	0.64	+0.6
2,802,933	-		GFF2769	0.64	-0.8
2,802,933	-		GFF2769	0.64	-0.1
2,802,938	-		GFF2769	0.65	+0.3
2,802,940	+		GFF2769	0.65	-0.8
2,802,946	-		GFF2769	0.65	+0.5
2,802,948	-		GFF2769	0.65	+0.2
2,802,948	-		GFF2769	0.65	-0.6
2,802,950	+		GFF2769	0.66	+2.0
2,802,958	-		GFF2769	0.66	-0.7
2,802,963	-		GFF2769	0.67	-1.5
2,802,970	+		GFF2769	0.67	-1.3
2,802,972	+		GFF2769	0.68	+0.1
2,802,994	+		GFF2769	0.69	-0.2
2,802,994	+		GFF2769	0.69	+0.8
2,803,004	+		GFF2769	0.70	-0.7
2,803,004	+		GFF2769	0.70	+0.9
2,803,012	-		GFF2769	0.71	+0.7
2,803,022	+		GFF2769	0.72	+0.5
2,803,056	+		GFF2769	0.75	+0.8
2,803,058	+		GFF2769	0.75	+0.1
2,803,058	+		GFF2769	0.75	-0.5
2,803,058	+		GFF2769	0.75	+0.3
2,803,058	+		GFF2769	0.75	-0.4
2,803,058	+		GFF2769	0.75	+0.7
2,803,058	+		GFF2769	0.75	+1.0
2,803,066	-		GFF2769	0.75	-0.2
2,803,066	-		GFF2769	0.75	+0.6
2,803,066	-		GFF2769	0.75	-0.8
2,803,066	-		GFF2769	0.75	-1.1
2,803,066	-		GFF2769	0.75	-2.3
2,803,066	-		GFF2769	0.75	-1.8
2,803,111	-		GFF2769	0.79	+0.3
2,803,134	-		GFF2769	0.81	+0.2
2,803,139	+		GFF2769	0.82	+0.3
2,803,139	-		GFF2769	0.82	+1.0
2,803,160	+		GFF2769	0.83	-0.5
2,803,173	-		GFF2769	0.85	-0.3
2,803,175	-		GFF2769	0.85	-2.3
2,803,180	-		GFF2769	0.85	+0.6
2,803,180	-		GFF2769	0.85	+0.5
2,803,193	-		GFF2769	0.86	-0.2
2,803,206	+		GFF2769	0.87	-0.1
2,803,214	-		GFF2769	0.88	+0.0
2,803,258	+				+0.6
2,803,271	-				-0.0
2,803,273	-				+0.2
2,803,305	+				+1.1
2,803,313	-				-1.3
2,803,348	+				-0.9
2,803,348	+				-0.6
2,803,348	+				-0.5
2,803,348	+				+0.1
2,803,348	+				-1.5
2,803,348	+				+1.3
2,803,353	-				+0.2
2,803,356	-				-1.0
2,803,356	-				+0.7
2,803,356	-				+1.6
2,803,356	-				-0.4
2,803,356	-				-0.6
2,803,356	-				-2.2
2,803,356	-				-0.5
2,803,406	+				-0.4
2,803,406	+				-0.9
2,803,406	+				-2.0
2,803,406	+				+1.1
2,803,406	+				+0.1
2,803,406	+				+0.2
2,803,413	-		GFF2770	0.10	-0.2
2,803,414	-		GFF2770	0.11	-1.0
2,803,414	-		GFF2770	0.11	+1.2
2,803,414	-		GFF2770	0.11	+0.2
2,803,430	+		GFF2770	0.14	-0.4
2,803,430	+		GFF2770	0.14	+0.7
2,803,430	+		GFF2770	0.14	+0.8
2,803,438	-		GFF2770	0.15	-1.0
2,803,438	-		GFF2770	0.15	+0.0
2,803,461	-		GFF2770	0.19	-0.7
2,803,485	+		GFF2770	0.24	+0.4
2,803,495	+		GFF2770	0.26	-0.8
2,803,509	-		GFF2770	0.28	-0.6
2,803,511	+		GFF2770	0.29	+0.7
2,803,555	+		GFF2770	0.37	+0.6
2,803,565	+		GFF2770	0.39	+0.3
2,803,565	+		GFF2770	0.39	-1.6
2,803,565	+		GFF2770	0.39	-0.9
2,803,565	+		GFF2770	0.39	+0.9
2,803,565	+		GFF2770	0.39	+0.2
2,803,573	-		GFF2770	0.40	+0.6
2,803,573	-		GFF2770	0.40	-3.5
2,803,582	+		GFF2770	0.42	-0.4
2,803,584	-		GFF2770	0.43	+0.6
2,803,601	+		GFF2770	0.46	+0.1
2,803,602	+		GFF2770	0.46	-1.8
2,803,610	-		GFF2770	0.47	+1.3
2,803,637	-		GFF2770	0.52	+0.9
2,803,637	-		GFF2770	0.52	-1.3
2,803,652	+		GFF2770	0.55	-1.7
2,803,652	+		GFF2770	0.55	-2.4
2,803,652	+		GFF2770	0.55	-0.2
2,803,652	+		GFF2770	0.55	-0.1
2,803,652	+		GFF2770	0.55	-0.2
2,803,660	-		GFF2770	0.57	-0.0
2,803,676	+		GFF2770	0.60	+0.4
2,803,676	+		GFF2770	0.60	-0.8
2,803,676	+		GFF2770	0.60	-0.2
2,803,676	-		GFF2770	0.60	+1.8
2,803,684	-		GFF2770	0.61	-0.7
2,803,694	-		GFF2770	0.63	+0.1
2,803,703	+		GFF2770	0.65	-0.7
2,803,708	-		GFF2770	0.66	-1.4
2,803,738	-		GFF2770	0.71	+0.6
2,803,760	+		GFF2770	0.75	+1.1
2,803,785	-		GFF2770	0.80	-0.9
2,803,785	-		GFF2770	0.80	+1.4
2,803,785	-		GFF2770	0.80	-0.4
2,803,785	-		GFF2770	0.80	+0.9
2,803,785	-		GFF2770	0.80	-1.3
2,803,785	-		GFF2770	0.80	+0.1
2,803,785	-		GFF2770	0.80	+0.8
2,803,785	-		GFF2770	0.80	+0.0
2,803,785	-		GFF2770	0.80	-0.6
2,803,813	+		GFF2770	0.85	-0.1
2,803,813	+		GFF2770	0.85	+1.1
2,803,818	+		GFF2770	0.86	+0.6
2,803,818	+		GFF2770	0.86	+0.8
2,803,818	+		GFF2770	0.86	-0.0
2,803,818	+		GFF2770	0.86	-1.4
2,803,818	+		GFF2770	0.86	-1.6
2,803,826	-		GFF2770	0.88	-2.1
2,803,834	-		GFF2770	0.89	-0.4
2,803,836	+		GFF2770	0.90	-1.3
2,803,841	+				-0.6
2,803,841	+				-0.6
2,803,844	-				-0.1
2,803,844	-				-1.6
2,803,849	-				-0.3
2,803,886	+				+0.4
2,803,893	+				-1.7
2,803,893	+				+1.0
2,803,898	+				-1.1
2,803,898	+				-0.7
2,803,903	-				-0.6
2,803,903	-				+0.8
2,803,906	-				+0.6
2,803,906	-				+0.3
2,803,906	-				+0.1
2,803,906	-				-2.6
2,803,913	-				-0.3
2,803,914	+				+0.7
2,803,919	+				+0.9
2,803,925	+				+0.3
2,803,930	+				+0.1
2,803,956	+				+0.3
2,803,956	+				-0.2
2,803,956	+				+0.9
2,803,966	+		GFF2771	0.11	-0.7
2,803,966	+		GFF2771	0.11	+0.0
2,803,974	-		GFF2771	0.13	-0.8
2,803,981	+		GFF2771	0.14	+0.6
2,803,984	+		GFF2771	0.14	-0.3
2,804,017	-		GFF2771	0.20	-1.0
2,804,045	+		GFF2771	0.24	+1.0
2,804,048	-		GFF2771	0.25	+0.2
2,804,063	+		GFF2771	0.27	-0.3
2,804,120	-		GFF2771	0.37	-0.9
2,804,120	-		GFF2771	0.37	-0.7
2,804,120	-		GFF2771	0.37	-0.4
2,804,124	+		GFF2771	0.37	-1.4
2,804,222	+		GFF2771	0.54	-0.3
2,804,230	-		GFF2771	0.55	-1.3
2,804,230	-		GFF2771	0.55	-1.3
2,804,230	-		GFF2771	0.55	-2.5
2,804,278	+		GFF2771	0.63	-1.1
2,804,283	+		GFF2771	0.64	+0.5
2,804,286	-		GFF2771	0.64	-0.7
2,804,286	-		GFF2771	0.64	-0.4
2,804,290	+		GFF2771	0.65	-0.2
2,804,291	-		GFF2771	0.65	+0.3
2,804,291	-		GFF2771	0.65	-0.4
2,804,291	-		GFF2771	0.65	-0.2
2,804,291	-		GFF2771	0.65	+0.4
2,804,291	-		GFF2771	0.65	+0.0
2,804,291	-		GFF2771	0.65	+0.8
2,804,291	-		GFF2771	0.65	-0.4
2,804,291	-		GFF2771	0.65	+0.2
2,804,293	-		GFF2771	0.66	-0.5
2,804,298	-		GFF2771	0.66	-0.8
2,804,298	-		GFF2771	0.66	+0.2
2,804,299	-		GFF2771	0.67	-1.5
2,804,299	-		GFF2771	0.67	-2.1
2,804,318	-		GFF2771	0.70	-1.3
2,804,318	-		GFF2771	0.70	+0.3
2,804,321	+		GFF2771	0.70	-0.5
2,804,321	+		GFF2771	0.70	-0.5
2,804,326	+		GFF2771	0.71	-0.1
2,804,326	+		GFF2771	0.71	-0.3
2,804,326	+		GFF2771	0.71	+0.5
2,804,326	+		GFF2771	0.71	+0.0
2,804,329	-		GFF2771	0.71	-1.8
2,804,329	-		GFF2771	0.71	-1.0
2,804,334	-		GFF2771	0.72	+0.1
2,804,334	-		GFF2771	0.72	-2.8
2,804,334	-		GFF2771	0.72	+0.5
2,804,334	-		GFF2771	0.72	-0.1
2,804,334	-		GFF2771	0.72	-0.5
2,804,334	-		GFF2771	0.72	-1.1
2,804,334	-		GFF2771	0.72	-0.9
2,804,334	-		GFF2771	0.72	-1.5
2,804,334	-		GFF2771	0.72	-0.0
2,804,334	-		GFF2771	0.72	-2.1
2,804,342	+		GFF2771	0.74	+0.8
2,804,342	+		GFF2771	0.74	-0.9
2,804,342	+		GFF2771	0.74	-0.1
2,804,342	+		GFF2771	0.74	-1.5
2,804,347	+		GFF2771	0.74	+0.3
2,804,347	+		GFF2771	0.74	-0.3
2,804,347	+		GFF2771	0.74	-0.1
2,804,347	+		GFF2771	0.74	-0.2
2,804,355	-		GFF2771	0.76	-0.3
2,804,355	-		GFF2771	0.76	-1.0
2,804,355	-		GFF2771	0.76	+0.1
2,804,355	-		GFF2771	0.76	-0.3
2,804,355	-		GFF2771	0.76	+0.9
2,804,357	+		GFF2771	0.76	-1.0
2,804,357	+		GFF2771	0.76	+0.6
2,804,357	+		GFF2771	0.76	-0.5
2,804,357	+		GFF2771	0.76	-0.6
2,804,376	+		GFF2771	0.79	-1.6
2,804,376	+		GFF2771	0.79	-1.4
2,804,376	+		GFF2771	0.79	-0.1
2,804,381	+		GFF2771	0.80	+0.3
2,804,384	-		GFF2771	0.81	-0.2
2,804,384	-		GFF2771	0.81	-0.4
2,804,384	-		GFF2771	0.81	-2.0
2,804,386	+		GFF2771	0.81	+0.8
2,804,386	+		GFF2771	0.81	+0.7
2,804,386	+		GFF2771	0.81	-1.0
2,804,386	+		GFF2771	0.81	+0.4
2,804,386	+		GFF2771	0.81	+1.4
2,804,389	-		GFF2771	0.81	-0.4
2,804,394	-		GFF2771	0.82	+0.0
2,804,394	-		GFF2771	0.82	-1.8
2,804,394	-		GFF2771	0.82	+0.0
2,804,399	+		GFF2771	0.83	+1.0
2,804,401	-		GFF2771	0.83	-0.4
2,804,404	-		GFF2771	0.84	-2.4
2,804,406	-		GFF2771	0.84	+0.6
2,804,459	+				+0.5
2,804,464	+				-0.6
2,804,464	+				-0.2
2,804,464	+				+0.6
2,804,467	-				+0.3
2,804,467	-				-3.1
2,804,467	-				-1.2
2,804,467	-				+0.2
2,804,467	-				-0.3
2,804,472	-				-1.3
2,804,472	-				-0.1
2,804,472	-				-0.3
2,804,472	-				-1.7
2,804,488	-				+0.8
2,804,613	+		GFF2772	0.16	-0.3
2,804,621	-		GFF2772	0.17	-0.6
2,804,652	+		GFF2772	0.23	-0.8
2,804,658	+		GFF2772	0.24	-0.7
2,804,676	+		GFF2772	0.27	+0.4
2,804,684	-		GFF2772	0.29	+0.8
2,804,690	-		GFF2772	0.30	+0.2
2,804,700	+		GFF2772	0.32	+0.8
2,804,708	-		GFF2772	0.33	-0.6
2,804,711	+		GFF2772	0.34	+0.6
2,804,719	-		GFF2772	0.35	+0.4
2,804,719	-		GFF2772	0.35	+0.8
2,804,725	+		GFF2772	0.36	+0.0
2,804,725	+		GFF2772	0.36	+1.4
2,804,725	+		GFF2772	0.36	-0.0
2,804,725	+		GFF2772	0.36	-0.3
2,804,730	+		GFF2772	0.37	-1.0
2,804,730	+		GFF2772	0.37	+1.2
2,804,730	+		GFF2772	0.37	+0.8
2,804,730	+		GFF2772	0.37	+0.4
2,804,730	+		GFF2772	0.37	+1.0
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