Strain Fitness in Sphingobium sp. HT1-2 around GFF2747

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,772,458	+		GFF2746	0.57	-0.2
2,772,466	+		GFF2746	0.58	-1.1
2,772,466	-		GFF2746	0.58	+0.6
2,772,469	+		GFF2746	0.58	+0.7
2,772,469	+		GFF2746	0.58	-0.2
2,772,469	+		GFF2746	0.58	-0.7
2,772,469	+		GFF2746	0.58	-0.0
2,772,469	+		GFF2746	0.58	-2.2
2,772,469	+		GFF2746	0.58	+0.1
2,772,469	+		GFF2746	0.58	-0.6
2,772,474	+		GFF2746	0.58	+0.6
2,772,477	-		GFF2746	0.58	-0.3
2,772,477	-		GFF2746	0.58	-1.4
2,772,477	-		GFF2746	0.58	+0.3
2,772,477	-		GFF2746	0.58	+1.5
2,772,477	-		GFF2746	0.58	-2.1
2,772,477	-		GFF2746	0.58	-2.5
2,772,477	-		GFF2746	0.58	-0.3
2,772,477	-		GFF2746	0.58	-0.1
2,772,477	-		GFF2746	0.58	-0.1
2,772,477	-		GFF2746	0.58	+0.1
2,772,477	-		GFF2746	0.58	+0.7
2,772,477	-		GFF2746	0.58	+0.4
2,772,477	-		GFF2746	0.58	+0.5
2,772,477	-		GFF2746	0.58	-0.8
2,772,481	+		GFF2746	0.58	-1.8
2,772,487	-		GFF2746	0.59	-1.6
2,772,492	-		GFF2746	0.59	-1.0
2,772,493	-		GFF2746	0.59	-0.5
2,772,499	-		GFF2746	0.59	-2.1
2,772,499	-		GFF2746	0.59	-0.4
2,772,504	+		GFF2746	0.59	-0.4
2,772,512	-		GFF2746	0.60	+0.3
2,772,512	-		GFF2746	0.60	+0.1
2,772,512	-		GFF2746	0.60	+0.0
2,772,520	+		GFF2746	0.60	-1.5
2,772,520	+		GFF2746	0.60	-0.8
2,772,520	+		GFF2746	0.60	-0.8
2,772,520	+		GFF2746	0.60	-1.1
2,772,520	+		GFF2746	0.60	+0.8
2,772,520	+		GFF2746	0.60	+0.5
2,772,520	+		GFF2746	0.60	+0.7
2,772,520	+		GFF2746	0.60	-1.2
2,772,520	+		GFF2746	0.60	-1.1
2,772,524	+		GFF2746	0.60	-0.1
2,772,528	-		GFF2746	0.60	-0.9
2,772,528	-		GFF2746	0.60	-0.3
2,772,528	-		GFF2746	0.60	+1.4
2,772,528	-		GFF2746	0.60	-1.6
2,772,528	-		GFF2746	0.60	+0.6
2,772,528	-		GFF2746	0.60	-2.5
2,772,528	-		GFF2746	0.60	+0.1
2,772,528	-		GFF2746	0.60	-0.8
2,772,528	-		GFF2746	0.60	+0.6
2,772,528	-		GFF2746	0.60	-0.2
2,772,528	-		GFF2746	0.60	+0.4
2,772,528	-		GFF2746	0.60	-0.8
2,772,528	-		GFF2746	0.60	+0.2
2,772,528	-		GFF2746	0.60	+0.4
2,772,528	-		GFF2746	0.60	-1.7
2,772,528	-		GFF2746	0.60	-1.3
2,772,528	-		GFF2746	0.60	-0.7
2,772,529	+		GFF2746	0.60	-1.7
2,772,529	+		GFF2746	0.60	-0.3
2,772,529	+		GFF2746	0.60	-2.1
2,772,529	+		GFF2746	0.60	+0.6
2,772,529	+		GFF2746	0.60	-0.6
2,772,529	+		GFF2746	0.60	+1.1
2,772,529	+		GFF2746	0.60	-0.4
2,772,532	-		GFF2746	0.61	-1.1
2,772,532	-		GFF2746	0.61	-1.2
2,772,534	+		GFF2746	0.61	+1.2
2,772,537	-		GFF2746	0.61	+0.7
2,772,537	-		GFF2746	0.61	-0.2
2,772,537	-		GFF2746	0.61	+0.2
2,772,537	-		GFF2746	0.61	-1.2
2,772,537	-		GFF2746	0.61	-1.1
2,772,538	-		GFF2746	0.61	-0.5
2,772,538	-		GFF2746	0.61	-1.1
2,772,542	-		GFF2746	0.61	+0.3
2,772,542	-		GFF2746	0.61	-1.0
2,772,542	-		GFF2746	0.61	-0.8
2,772,544	-		GFF2746	0.61	+0.8
2,772,575	+		GFF2746	0.62	-1.7
2,772,575	-		GFF2746	0.62	+0.0
2,772,581	+		GFF2746	0.63	-0.9
2,772,581	+		GFF2746	0.63	-1.0
2,772,583	-		GFF2746	0.63	-1.0
2,772,583	-		GFF2746	0.63	+0.2
2,772,583	-		GFF2746	0.63	-0.6
2,772,601	+		GFF2746	0.64	+0.6
2,772,601	+		GFF2746	0.64	-0.4
2,772,607	+		GFF2746	0.64	+0.3
2,772,657	-		GFF2746	0.66	-1.4
2,772,659	+		GFF2746	0.66	-0.3
2,772,659	+		GFF2746	0.66	-0.4
2,772,665	+		GFF2746	0.66	-0.6
2,772,665	+		GFF2746	0.66	-0.2
2,772,670	+		GFF2746	0.67	+0.1
2,772,670	+		GFF2746	0.67	-1.9
2,772,673	-		GFF2746	0.67	+0.1
2,772,673	-		GFF2746	0.67	+0.6
2,772,673	-		GFF2746	0.67	+0.7
2,772,678	-		GFF2746	0.67	-0.2
2,772,678	-		GFF2746	0.67	+0.7
2,772,683	+		GFF2746	0.67	-1.0
2,772,683	+		GFF2746	0.67	+0.5
2,772,683	+		GFF2746	0.67	-1.4
2,772,683	+		GFF2746	0.67	+0.9
2,772,691	-		GFF2746	0.67	+1.0
2,772,691	-		GFF2746	0.67	-1.8
2,772,691	-		GFF2746	0.67	-0.4
2,772,691	-		GFF2746	0.67	-1.8
2,772,708	+		GFF2746	0.68	-1.0
2,772,708	+		GFF2746	0.68	-0.5
2,772,712	-		GFF2746	0.68	-2.0
2,772,716	-		GFF2746	0.69	-1.8
2,772,716	-		GFF2746	0.69	-1.1
2,772,717	-		GFF2746	0.69	+0.5
2,772,744	+		GFF2746	0.70	-0.0
2,772,749	+		GFF2746	0.70	-0.9
2,772,778	-		GFF2746	0.71	-1.5
2,772,787	-		GFF2746	0.72	-0.1
2,772,819	+		GFF2746	0.73	-0.4
2,772,837	+		GFF2746	0.74	+0.0
2,772,847	+		GFF2746	0.74	-0.6
2,772,849	+		GFF2746	0.74	-0.7
2,772,860	+		GFF2746	0.75	-1.6
2,772,864	+		GFF2746	0.75	-0.4
2,772,864	+		GFF2746	0.75	-0.1
2,772,870	-		GFF2746	0.75	+0.3
2,772,872	-		GFF2746	0.75	+1.0
2,772,893	+		GFF2746	0.76	-1.1
2,772,901	-		GFF2746	0.77	-0.4
2,772,904	+		GFF2746	0.77	+0.5
2,772,904	+		GFF2746	0.77	-1.5
2,772,904	+		GFF2746	0.77	-0.3
2,772,907	-		GFF2746	0.77	+0.9
2,772,910	+		GFF2746	0.77	-0.6
2,772,912	-		GFF2746	0.77	-0.9
2,772,912	-		GFF2746	0.77	+0.0
2,772,912	-		GFF2746	0.77	-0.0
2,772,914	+		GFF2746	0.77	-0.3
2,772,917	-		GFF2746	0.77	-2.0
2,772,917	-		GFF2746	0.77	+0.1
2,772,918	+		GFF2746	0.77	+0.2
2,772,924	+		GFF2746	0.78	-1.8
2,772,926	-		GFF2746	0.78	-1.6
2,772,939	+		GFF2746	0.78	-1.3
2,772,939	+		GFF2746	0.78	-0.5
2,772,939	+		GFF2746	0.78	-0.1
2,772,939	+		GFF2746	0.78	+0.6
2,772,939	+		GFF2746	0.78	+0.8
2,772,939	+		GFF2746	0.78	+0.3
2,772,947	-		GFF2746	0.79	+1.1
2,772,947	-		GFF2746	0.79	-0.6
2,772,947	-		GFF2746	0.79	+0.8
2,772,947	-		GFF2746	0.79	+0.3
2,772,947	-		GFF2746	0.79	-0.5
2,772,947	-		GFF2746	0.79	+0.7
2,772,947	-		GFF2746	0.79	+0.1
2,772,947	-		GFF2746	0.79	-1.3
2,772,947	-		GFF2746	0.79	+1.8
2,772,947	-		GFF2746	0.79	-0.2
2,772,958	-		GFF2746	0.79	-0.1
2,772,976	-		GFF2746	0.80	-1.2
2,772,992	+		GFF2746	0.80	-0.2
2,772,992	+		GFF2746	0.80	-0.3
2,773,051	-		GFF2746	0.83	-2.0
2,773,061	+		GFF2746	0.83	-0.9
2,773,069	-		GFF2746	0.84	-0.7
2,773,069	-		GFF2746	0.84	-0.8
2,773,069	-		GFF2746	0.84	-0.6
2,773,069	-		GFF2746	0.84	-2.8
2,773,069	-		GFF2746	0.84	-0.7
2,773,069	-		GFF2746	0.84	+0.2
2,773,076	+		GFF2746	0.84	-0.8
2,773,076	-		GFF2746	0.84	-0.8
2,773,084	-		GFF2746	0.84	-0.7
2,773,092	+		GFF2746	0.85	-0.8
2,773,092	+		GFF2746	0.85	-0.5
2,773,124	+		GFF2746	0.86	+0.1
2,773,135	+		GFF2746	0.87	-0.3
2,773,141	+		GFF2746	0.87	-0.1
2,773,141	+		GFF2746	0.87	-1.9
2,773,141	+		GFF2746	0.87	-1.4
2,773,141	+		GFF2746	0.87	-1.3
2,773,144	-		GFF2746	0.87	+0.3
2,773,146	+		GFF2746	0.87	+0.2
2,773,146	+		GFF2746	0.87	-1.1
2,773,146	+		GFF2746	0.87	+0.6
2,773,146	+		GFF2746	0.87	+0.7
2,773,146	+		GFF2746	0.87	-1.0
2,773,146	+		GFF2746	0.87	-1.5
2,773,146	+		GFF2746	0.87	+1.5
2,773,146	+		GFF2746	0.87	+0.9
2,773,146	+		GFF2746	0.87	+0.6
2,773,146	+		GFF2746	0.87	-1.5
2,773,146	+		GFF2746	0.87	-1.8
2,773,149	-		GFF2746	0.87	-2.6
2,773,151	+		GFF2746	0.87	-0.8
2,773,151	+		GFF2746	0.87	-1.2
2,773,151	+		GFF2746	0.87	-0.7
2,773,151	+		GFF2746	0.87	-0.3
2,773,154	-		GFF2746	0.87	+0.3
2,773,154	-		GFF2746	0.87	-2.6
2,773,154	-		GFF2746	0.87	+1.0
2,773,154	-		GFF2746	0.87	+0.1
2,773,154	-		GFF2746	0.87	+0.4
2,773,154	-		GFF2746	0.87	-1.8
2,773,154	-		GFF2746	0.87	-0.3
2,773,154	-		GFF2746	0.87	-1.4
2,773,154	-		GFF2746	0.87	-0.1
2,773,159	-		GFF2746	0.88	-2.1
2,773,159	-		GFF2746	0.88	+0.7
2,773,159	-		GFF2746	0.88	-3.2
2,773,159	-		GFF2746	0.88	+0.0
2,773,159	-		GFF2746	0.88	-2.0
2,773,161	+		GFF2746	0.88	+0.9
2,773,171	+		GFF2746	0.88	-0.1
2,773,174	-		GFF2746	0.88	+0.2
2,773,179	-		GFF2746	0.89	+0.2
2,773,198	+		GFF2746	0.89	-0.4
2,773,198	+		GFF2746	0.89	+0.7
2,773,198	+		GFF2746	0.89	+0.2
2,773,206	-		GFF2746	0.90	-1.5
2,773,206	-		GFF2746	0.90	-0.1
2,773,206	-		GFF2746	0.90	-1.2
2,773,312	+				-0.6
2,773,325	+				-0.5
2,773,333	-				+0.3
2,773,333	-				-0.4
2,773,333	-				+0.2
2,773,333	-				+0.5
2,773,341	+				-0.2
2,773,342	+				-2.0
2,773,349	-				+0.3
2,773,360	+				-2.5
2,773,360	-				+0.5
2,773,362	+				-2.3
2,773,367	+				+0.5
2,773,367	+				-1.6
2,773,367	+				-0.1
2,773,368	-				+0.5
2,773,370	-				-0.3
2,773,375	-				+0.4
2,773,375	-				-0.2
2,773,378	+				-0.8
2,773,378	+				-0.0
2,773,378	+				+0.8
2,773,378	+				+1.0
2,773,378	+				+0.2
2,773,383	+				-0.8
2,773,383	+				-1.0
2,773,383	+				+0.3
2,773,386	-				-0.3
2,773,386	-				-0.8
2,773,388	+				+0.4
2,773,391	-				-1.1
2,773,438	+				-2.3
2,773,438	-				-1.0
2,773,438	-				-0.5
2,773,459	+				-0.2
2,773,462	-				-0.9
2,773,462	-				-1.5
2,773,464	+				-0.5
2,773,464	+				-0.6
2,773,464	+				-0.7
2,773,464	+				-0.2
2,773,465	+				+0.9
2,773,465	+				+1.0
2,773,470	+				+0.4
2,773,472	+				-0.5
2,773,472	+				-0.8
2,773,472	+				-0.1
2,773,472	+				-0.9
2,773,472	-				+0.5
2,773,472	-				-0.5
2,773,473	+				-0.2
2,773,478	-				-1.0
2,773,480	-				-0.4
2,773,481	-				-0.5
2,773,500	+				-2.2
2,773,505	+		GFF2747	0.10	+0.1
2,773,505	+		GFF2747	0.10	-0.6
2,773,505	+		GFF2747	0.10	-0.3
2,773,505	+		GFF2747	0.10	+0.7
2,773,505	+		GFF2747	0.10	-1.7
2,773,505	+		GFF2747	0.10	+0.8
2,773,505	+		GFF2747	0.10	-0.1
2,773,505	+		GFF2747	0.10	+0.5
2,773,505	+		GFF2747	0.10	-1.9
2,773,505	+		GFF2747	0.10	+0.2
2,773,505	+		GFF2747	0.10	+1.0
2,773,505	+		GFF2747	0.10	-0.4
2,773,505	+		GFF2747	0.10	+0.1
2,773,505	+		GFF2747	0.10	+1.3
2,773,505	+		GFF2747	0.10	-0.7
2,773,505	+		GFF2747	0.10	-1.8
2,773,505	+		GFF2747	0.10	-1.1
2,773,508	-		GFF2747	0.11	+0.1
2,773,513	-		GFF2747	0.12	-1.5
2,773,513	-		GFF2747	0.12	+0.3
2,773,513	-		GFF2747	0.12	+0.3
2,773,513	-		GFF2747	0.12	+0.2
2,773,513	-		GFF2747	0.12	+0.2
2,773,513	-		GFF2747	0.12	+0.6
2,773,513	-		GFF2747	0.12	-1.0
2,773,513	-		GFF2747	0.12	+0.2
2,773,513	-		GFF2747	0.12	-1.9
2,773,513	-		GFF2747	0.12	+0.1
2,773,513	-		GFF2747	0.12	-0.4
2,773,513	-		GFF2747	0.12	+0.4
2,773,530	+		GFF2747	0.15	-1.9
2,773,539	+		GFF2747	0.17	-0.1
2,773,539	+		GFF2747	0.17	+0.4
2,773,540	+		GFF2747	0.17	-0.2
2,773,540	+		GFF2747	0.17	-2.4
2,773,540	+		GFF2747	0.17	+0.1
2,773,540	-		GFF2747	0.17	-2.0
2,773,542	-		GFF2747	0.18	-0.3
2,773,547	-		GFF2747	0.19	+0.3
2,773,548	+		GFF2747	0.19	+0.2
2,773,548	+		GFF2747	0.19	-0.3
2,773,548	-		GFF2747	0.19	-0.7
2,773,548	-		GFF2747	0.19	-1.4
2,773,553	+		GFF2747	0.20	+0.2
2,773,553	+		GFF2747	0.20	+0.8
2,773,555	+		GFF2747	0.20	-1.0
2,773,555	+		GFF2747	0.20	-0.2
2,773,555	+		GFF2747	0.20	+0.7
2,773,561	-		GFF2747	0.21	+0.5
2,773,563	-		GFF2747	0.22	-3.3
2,773,565	+		GFF2747	0.22	-1.1
2,773,575	+		GFF2747	0.24	+0.9
2,773,575	+		GFF2747	0.24	+0.3
2,773,583	-		GFF2747	0.26	-0.5
2,773,583	-		GFF2747	0.26	-0.5
2,773,592	+		GFF2747	0.28	+0.0
2,773,599	-		GFF2747	0.29	-0.1
2,773,633	-		GFF2747	0.36	-0.5
2,773,648	+		GFF2747	0.39	-0.2
2,773,656	-		GFF2747	0.41	-2.2
2,773,678	+		GFF2747	0.45	+0.2
2,773,681	-		GFF2747	0.46	-0.0
2,773,686	+		GFF2747	0.47	-0.5
2,773,689	-		GFF2747	0.47	-1.5
2,773,691	+		GFF2747	0.48	-2.5
2,773,691	+		GFF2747	0.48	-1.4
2,773,691	+		GFF2747	0.48	-0.8
2,773,691	-		GFF2747	0.48	-0.8
2,773,691	-		GFF2747	0.48	-0.4
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2,773,711	+		GFF2747	0.52	+1.2
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2,773,711	+		GFF2747	0.52	-2.1
2,773,711	+		GFF2747	0.52	-1.7
2,773,711	+		GFF2747	0.52	-1.8
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2,773,795	-		GFF2747	0.69	-1.1
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2,773,809	-		GFF2747	0.72	-1.1
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2,773,849	+		GFF2747	0.80	-2.2
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2,773,915	+				+0.2
2,773,915	+				-0.3
2,773,926	+				-2.1
2,773,926	+				-0.5
2,773,931	+				-1.3
2,773,931	+				+0.5
2,773,931	+				-2.1
2,773,934	-				+1.5
2,773,934	-				-1.2
2,773,934	-				-0.6
2,773,938	+				+0.9
2,773,939	-				-1.8
2,773,939	-				-0.1
2,773,948	+				-2.6
2,773,951	-				+0.2
2,773,956	-				-1.0
2,773,956	-				+0.2
2,773,957	+				+0.4
2,773,957	+				+0.1
2,773,957	+				+0.1
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2,773,957	+				+0.3
2,773,957	+				-0.8
2,773,957	+				+0.4
2,773,957	+				+0.3
2,773,957	+				-2.8
2,773,957	+				+0.1
2,773,957	+				+0.9
2,773,957	+				-1.4
2,773,957	+				+0.6
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2,773,965	-				-2.5
2,773,965	-				+0.8
2,773,965	-				+0.9
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2,774,007	-				-0.8
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