Strain Fitness in Sphingobium sp. HT1-2 around GFF2667

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,683,426	-				-0.5
2,683,426	-				-1.4
2,683,431	-				-2.5
2,683,431	-				-0.6
2,683,431	-				+0.3
2,683,431	-				+0.2
2,683,442	+		GFF2666	0.11	-0.2
2,683,442	+		GFF2666	0.11	+0.8
2,683,450	-		GFF2666	0.12	-2.3
2,683,451	+		GFF2666	0.12	-0.7
2,683,459	-		GFF2666	0.13	-0.1
2,683,459	-		GFF2666	0.13	-0.0
2,683,459	-		GFF2666	0.13	+0.8
2,683,461	+		GFF2666	0.13	-0.1
2,683,461	+		GFF2666	0.13	-0.3
2,683,461	+		GFF2666	0.13	+0.4
2,683,461	+		GFF2666	0.13	+0.5
2,683,461	+		GFF2666	0.13	-0.3
2,683,461	+		GFF2666	0.13	-2.1
2,683,461	+		GFF2666	0.13	-0.2
2,683,461	+		GFF2666	0.13	+1.2
2,683,461	+		GFF2666	0.13	-0.1
2,683,461	+		GFF2666	0.13	-1.1
2,683,461	+		GFF2666	0.13	+0.5
2,683,461	+		GFF2666	0.13	-1.1
2,683,461	+		GFF2666	0.13	+0.5
2,683,461	+		GFF2666	0.13	-1.1
2,683,461	+		GFF2666	0.13	-0.2
2,683,461	+		GFF2666	0.13	+0.1
2,683,461	+		GFF2666	0.13	+0.4
2,683,461	+		GFF2666	0.13	-2.1
2,683,461	+		GFF2666	0.13	-0.0
2,683,469	-		GFF2666	0.14	+0.5
2,683,469	-		GFF2666	0.14	-1.7
2,683,469	-		GFF2666	0.14	-1.3
2,683,469	-		GFF2666	0.14	+0.6
2,683,469	-		GFF2666	0.14	-0.0
2,683,469	-		GFF2666	0.14	-1.6
2,683,469	-		GFF2666	0.14	-1.3
2,683,469	-		GFF2666	0.14	-0.5
2,683,469	-		GFF2666	0.14	-1.9
2,683,469	-		GFF2666	0.14	-0.3
2,683,469	-		GFF2666	0.14	-0.5
2,683,469	-		GFF2666	0.14	+0.5
2,683,471	+		GFF2666	0.14	-0.5
2,683,528	+		GFF2666	0.20	-0.0
2,683,528	+		GFF2666	0.20	-1.3
2,683,528	+		GFF2666	0.20	+0.1
2,683,533	+		GFF2666	0.21	-0.8
2,683,536	-		GFF2666	0.21	-0.8
2,683,541	-		GFF2666	0.21	-0.1
2,683,541	-		GFF2666	0.21	+0.1
2,683,570	+		GFF2666	0.24	-1.2
2,683,574	+		GFF2666	0.25	+0.9
2,683,574	+		GFF2666	0.25	-0.7
2,683,574	+		GFF2666	0.25	-0.4
2,683,577	-		GFF2666	0.25	+0.0
2,683,593	-		GFF2666	0.27	+0.9
2,683,597	-		GFF2666	0.27	-0.5
2,683,600	-		GFF2666	0.28	-1.2
2,683,606	+		GFF2666	0.28	+0.1
2,683,607	-		GFF2666	0.28	+0.0
2,683,637	+		GFF2666	0.32	+0.2
2,683,660	+		GFF2666	0.34	-0.3
2,683,683	+		GFF2666	0.36	-0.3
2,683,683	+		GFF2666	0.36	-0.6
2,683,691	-		GFF2666	0.37	-0.9
2,683,698	+		GFF2666	0.38	-0.5
2,683,698	+		GFF2666	0.38	-0.5
2,683,698	+		GFF2666	0.38	-1.2
2,683,700	-		GFF2666	0.38	-1.3
2,683,703	+		GFF2666	0.39	+1.1
2,683,706	-		GFF2666	0.39	+0.5
2,683,706	-		GFF2666	0.39	-0.5
2,683,706	-		GFF2666	0.39	-2.1
2,683,706	-		GFF2666	0.39	-0.3
2,683,708	+		GFF2666	0.39	-0.2
2,683,711	-		GFF2666	0.39	+0.5
2,683,711	-		GFF2666	0.39	-0.9
2,683,711	-		GFF2666	0.39	+1.0
2,683,721	-		GFF2666	0.40	-0.5
2,683,721	-		GFF2666	0.40	-1.0
2,683,729	+		GFF2666	0.41	+1.4
2,683,731	+		GFF2666	0.41	-0.4
2,683,731	+		GFF2666	0.41	+0.7
2,683,767	+		GFF2666	0.45	-0.9
2,683,767	+		GFF2666	0.45	-0.6
2,683,767	+		GFF2666	0.45	+0.4
2,683,767	+		GFF2666	0.45	+0.5
2,683,767	+		GFF2666	0.45	-1.7
2,683,767	+		GFF2666	0.45	+1.0
2,683,775	-		GFF2666	0.46	-1.4
2,683,775	-		GFF2666	0.46	-1.0
2,683,775	-		GFF2666	0.46	-2.0
2,683,781	+		GFF2666	0.47	-0.3
2,683,781	+		GFF2666	0.47	-1.6
2,683,791	-		GFF2666	0.48	-0.5
2,683,803	-		GFF2666	0.49	-1.2
2,683,804	+		GFF2666	0.49	-1.1
2,683,846	+		GFF2666	0.54	-0.1
2,683,847	+		GFF2666	0.54	+0.3
2,683,855	-		GFF2666	0.55	-1.2
2,683,889	+		GFF2666	0.58	-0.3
2,683,897	-		GFF2666	0.59	-1.2
2,683,897	-		GFF2666	0.59	+1.9
2,683,899	+		GFF2666	0.59	+0.6
2,683,911	+		GFF2666	0.61	+0.7
2,683,911	+		GFF2666	0.61	+0.2
2,683,919	-		GFF2666	0.61	-0.4
2,683,919	-		GFF2666	0.61	-1.3
2,683,919	-		GFF2666	0.61	-0.5
2,683,921	+		GFF2666	0.62	-0.1
2,683,924	-		GFF2666	0.62	+0.5
2,683,924	-		GFF2666	0.62	+0.2
2,683,959	+		GFF2666	0.66	-0.9
2,683,959	+		GFF2666	0.66	-0.8
2,683,961	+		GFF2666	0.66	+0.9
2,683,964	-		GFF2666	0.66	-1.5
2,683,967	-		GFF2666	0.66	-1.0
2,683,967	-		GFF2666	0.66	-0.2
2,683,967	-		GFF2666	0.66	-0.5
2,683,969	+		GFF2666	0.67	+0.2
2,683,969	-		GFF2666	0.67	+0.0
2,683,969	-		GFF2666	0.67	+0.7
2,683,999	-		GFF2666	0.70	-0.1
2,683,999	-		GFF2666	0.70	+0.8
2,684,031	+		GFF2666	0.73	-0.5
2,684,040	+		GFF2666	0.74	-0.2
2,684,040	+		GFF2666	0.74	-0.2
2,684,048	-		GFF2666	0.75	-1.3
2,684,048	-		GFF2666	0.75	-0.3
2,684,056	+		GFF2666	0.76	+0.5
2,684,120	-		GFF2666	0.83	+0.9
2,684,131	+		GFF2666	0.84	+0.5
2,684,136	+		GFF2666	0.84	-0.1
2,684,136	+		GFF2666	0.84	+0.3
2,684,144	-		GFF2666	0.85	+0.2
2,684,144	-		GFF2666	0.85	+1.3
2,684,144	-		GFF2666	0.85	-0.7
2,684,144	-		GFF2666	0.85	-0.3
2,684,168	+		GFF2666	0.88	+0.2
2,684,181	+		GFF2666	0.89	-1.2
2,684,191	+				+1.3
2,684,199	-				-1.3
2,684,199	-				-1.1
2,684,199	-				-0.6
2,684,200	+				-1.4
2,684,200	+				+0.2
2,684,213	-				-0.2
2,684,217	+				-0.8
2,684,225	+				+0.0
2,684,227	-				-1.2
2,684,238	+				-0.2
2,684,244	+				-0.5
2,684,253	-				-1.7
2,684,271	+				+0.5
2,684,271	+				+0.1
2,684,271	+				-0.8
2,684,271	+				-1.6
2,684,279	-				+1.5
2,684,279	-				+0.9
2,684,281	+				-0.5
2,684,289	-				-0.1
2,684,303	+				+0.4
2,684,303	+				-0.7
2,684,308	+				-0.0
2,684,311	-				-1.1
2,684,312	-				-1.2
2,684,313	+				-4.0
2,684,321	-				-0.5
2,684,326	+				+1.0
2,684,327	+				+0.2
2,684,343	+				+0.9
2,684,343	+				-1.3
2,684,351	-				+0.5
2,684,351	-				-2.5
2,684,353	+				-2.6
2,684,370	-				+1.0
2,684,383	+				+0.4
2,684,383	+				-0.1
2,684,383	+				-0.1
2,684,390	-				-1.6
2,684,391	-				-0.6
2,684,391	-				+0.7
2,684,416	+				+0.3
2,684,416	+				-1.0
2,684,417	+				-1.4
2,684,425	-				+0.4
2,684,438	+				-1.3
2,684,438	+				-1.9
2,684,446	-				+0.8
2,684,448	+				-0.4
2,684,448	+				+0.4
2,684,456	-				-0.3
2,684,474	-				-1.1
2,684,475	+				+0.1
2,684,483	-				+0.1
2,684,493	+				-3.0
2,684,501	-		GFF2667	0.11	-1.9
2,684,501	-		GFF2667	0.11	-0.6
2,684,501	-		GFF2667	0.11	+1.0
2,684,509	-		GFF2667	0.12	-0.2
2,684,516	-		GFF2667	0.13	-0.4
2,684,516	-		GFF2667	0.13	+1.6
2,684,518	+		GFF2667	0.13	+0.4
2,684,519	-		GFF2667	0.13	+0.9
2,684,519	-		GFF2667	0.13	-0.3
2,684,527	+		GFF2667	0.14	+0.1
2,684,527	+		GFF2667	0.14	-0.3
2,684,538	+		GFF2667	0.16	-0.4
2,684,558	+		GFF2667	0.18	-0.9
2,684,563	+		GFF2667	0.19	-2.2
2,684,571	+		GFF2667	0.20	+0.0
2,684,571	-		GFF2667	0.20	-1.3
2,684,571	-		GFF2667	0.20	+0.6
2,684,571	-		GFF2667	0.20	+0.2
2,684,579	+		GFF2667	0.21	-1.3
2,684,579	+		GFF2667	0.21	-1.6
2,684,579	+		GFF2667	0.21	-1.3
2,684,579	+		GFF2667	0.21	-1.3
2,684,579	+		GFF2667	0.21	-2.3
2,684,579	-		GFF2667	0.21	+0.2
2,684,587	-		GFF2667	0.22	-1.3
2,684,587	-		GFF2667	0.22	+0.4
2,684,587	-		GFF2667	0.22	+0.9
2,684,591	+		GFF2667	0.23	+1.1
2,684,596	+		GFF2667	0.24	+0.1
2,684,605	-		GFF2667	0.25	+0.7
2,684,621	+		GFF2667	0.27	-0.3
2,684,629	-		GFF2667	0.28	-1.7
2,684,629	-		GFF2667	0.28	-0.3
2,684,629	-		GFF2667	0.28	-0.2
2,684,638	+		GFF2667	0.29	-1.4
2,684,638	+		GFF2667	0.29	-0.3
2,684,638	+		GFF2667	0.29	-1.9
2,684,638	+		GFF2667	0.29	-0.3
2,684,638	+		GFF2667	0.29	-1.1
2,684,638	+		GFF2667	0.29	-0.5
2,684,638	+		GFF2667	0.29	+0.3
2,684,638	+		GFF2667	0.29	+0.1
2,684,638	+		GFF2667	0.29	+0.0
2,684,638	+		GFF2667	0.29	-1.0
2,684,638	+		GFF2667	0.29	+0.7
2,684,638	+		GFF2667	0.29	-1.2
2,684,646	-		GFF2667	0.31	-2.3
2,684,646	-		GFF2667	0.31	-0.0
2,684,646	-		GFF2667	0.31	-0.6
2,684,646	-		GFF2667	0.31	-0.5
2,684,646	-		GFF2667	0.31	-0.7
2,684,646	-		GFF2667	0.31	-2.1
2,684,646	-		GFF2667	0.31	-0.1
2,684,646	-		GFF2667	0.31	+0.3
2,684,646	-		GFF2667	0.31	-0.2
2,684,646	-		GFF2667	0.31	-1.6
2,684,646	-		GFF2667	0.31	+0.3
2,684,646	-		GFF2667	0.31	-2.9
2,684,646	-		GFF2667	0.31	-0.5
2,684,646	-		GFF2667	0.31	+0.6
2,684,646	-		GFF2667	0.31	+1.2
2,684,647	-		GFF2667	0.31	-1.7
2,684,655	+		GFF2667	0.32	-1.3
2,684,655	-		GFF2667	0.32	-0.1
2,684,660	+		GFF2667	0.33	+0.7
2,684,664	+		GFF2667	0.33	+0.7
2,684,664	+		GFF2667	0.33	-0.2
2,684,677	+		GFF2667	0.35	-1.7
2,684,685	-		GFF2667	0.36	+0.7
2,684,695	-		GFF2667	0.37	-1.1
2,684,699	+		GFF2667	0.38	+0.2
2,684,706	+		GFF2667	0.39	+1.3
2,684,711	+		GFF2667	0.40	-0.0
2,684,729	+		GFF2667	0.42	-2.9
2,684,737	-		GFF2667	0.43	-0.1
2,684,742	+		GFF2667	0.44	-0.5
2,684,775	-		GFF2667	0.48	+1.0
2,684,781	+		GFF2667	0.49	-2.9
2,684,781	+		GFF2667	0.49	-1.6
2,684,788	-		GFF2667	0.50	-0.2
2,684,789	+		GFF2667	0.50	-0.2
2,684,791	+		GFF2667	0.51	+0.7
2,684,791	+		GFF2667	0.51	-0.2
2,684,797	-		GFF2667	0.51	-0.8
2,684,799	-		GFF2667	0.52	+0.8
2,684,799	-		GFF2667	0.52	+0.5
2,684,799	-		GFF2667	0.52	-0.9
2,684,799	-		GFF2667	0.52	+0.1
2,684,803	+		GFF2667	0.52	-0.2
2,684,810	-		GFF2667	0.53	-0.4
2,684,811	-		GFF2667	0.53	-2.1
2,684,818	-		GFF2667	0.54	-0.5
2,684,822	+		GFF2667	0.55	-1.8
2,684,822	+		GFF2667	0.55	+0.1
2,684,822	+		GFF2667	0.55	+0.0
2,684,822	+		GFF2667	0.55	+0.6
2,684,822	+		GFF2667	0.55	-0.5
2,684,825	-		GFF2667	0.55	+1.7
2,684,825	-		GFF2667	0.55	-1.3
2,684,825	-		GFF2667	0.55	-3.3
2,684,825	-		GFF2667	0.55	-0.6
2,684,825	-		GFF2667	0.55	-2.3
2,684,825	-		GFF2667	0.55	+0.3
2,684,827	+		GFF2667	0.56	-0.6
2,684,827	+		GFF2667	0.56	+0.2
2,684,830	-		GFF2667	0.56	+0.0
2,684,830	-		GFF2667	0.56	-0.7
2,684,830	-		GFF2667	0.56	+0.4
2,684,830	-		GFF2667	0.56	-2.9
2,684,835	-		GFF2667	0.57	+1.1
2,684,845	+		GFF2667	0.58	+1.0
2,684,845	+		GFF2667	0.58	-0.6
2,684,853	+		GFF2667	0.59	-0.8
2,684,853	+		GFF2667	0.59	+0.6
2,684,853	-		GFF2667	0.59	-2.1
2,684,853	-		GFF2667	0.59	-1.1
2,684,853	-		GFF2667	0.59	+0.7
2,684,853	-		GFF2667	0.59	+0.5
2,684,858	+		GFF2667	0.60	+2.0
2,684,858	-		GFF2667	0.60	-1.2
2,684,861	-		GFF2667	0.60	-1.6
2,684,866	-		GFF2667	0.61	+0.8
2,684,870	+		GFF2667	0.62	-0.1
2,684,870	+		GFF2667	0.62	-1.4
2,684,871	-		GFF2667	0.62	+0.5
2,684,871	-		GFF2667	0.62	+0.6
2,684,878	-		GFF2667	0.63	+0.4
2,684,894	-		GFF2667	0.65	+0.5
2,684,926	+		GFF2667	0.69	-0.1
2,684,926	+		GFF2667	0.69	-0.4
2,684,926	+		GFF2667	0.69	+0.3
2,684,926	+		GFF2667	0.69	-0.7
2,684,927	+		GFF2667	0.69	+0.4
2,684,927	+		GFF2667	0.69	-0.6
2,684,927	+		GFF2667	0.69	-0.5
2,684,927	+		GFF2667	0.69	+0.6
2,684,932	-		GFF2667	0.70	-0.7
2,684,934	-		GFF2667	0.70	+1.5
2,684,934	-		GFF2667	0.70	-0.2
2,684,934	-		GFF2667	0.70	-0.2
2,684,934	-		GFF2667	0.70	+0.9
2,684,934	-		GFF2667	0.70	-0.1
2,684,935	-		GFF2667	0.71	+0.8
2,684,935	-		GFF2667	0.71	-0.3
2,684,935	-		GFF2667	0.71	+0.4
2,684,935	-		GFF2667	0.71	-2.7
2,684,935	-		GFF2667	0.71	-0.3
2,684,956	-		GFF2667	0.73	-0.5
2,684,963	-		GFF2667	0.74	-0.3
2,684,965	-		GFF2667	0.75	-1.3
2,684,985	-		GFF2667	0.77	+0.7
2,685,003	-		GFF2667	0.80	-2.2
2,685,003	-		GFF2667	0.80	+0.5
2,685,016	-		GFF2667	0.82	+1.3
2,685,024	-		GFF2667	0.83	-0.9
2,685,034	-		GFF2667	0.84	+0.1
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