Strain Fitness in Sphingobium sp. HT1-2 around GFF2360

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,381,742	-				+0.1
2,381,762	-				-0.1
2,381,762	-				-0.2
2,381,762	-				-0.4
2,381,777	-				+0.1
2,381,862	+				+0.6
2,381,866	+				-0.6
2,381,870	-				-0.7
2,381,870	-				-0.1
2,381,872	-				-1.0
2,381,874	+				-0.9
2,381,884	-				+0.5
2,381,891	+				-1.0
2,381,893	-				-1.5
2,381,896	+				+0.1
2,381,898	-				-0.6
2,381,898	-				+2.1
2,381,899	-				-0.9
2,381,903	+				-0.4
2,381,909	+				+0.2
2,381,921	+				+0.3
2,381,922	-				-2.0
2,381,926	+				-0.9
2,381,926	+				-0.0
2,381,926	+				-1.0
2,381,926	+				-1.5
2,381,927	-				-0.5
2,381,931	+				-1.1
2,381,934	-				+0.8
2,381,934	-				-1.9
2,381,955	-		GFF2360	0.12	+0.0
2,381,961	+		GFF2360	0.12	+0.1
2,381,968	-		GFF2360	0.13	-1.6
2,381,972	-		GFF2360	0.14	-1.2
2,381,982	+		GFF2360	0.15	-0.6
2,381,984	-		GFF2360	0.15	+0.1
2,381,990	-		GFF2360	0.16	+0.7
2,381,990	-		GFF2360	0.16	-0.5
2,382,011	-		GFF2360	0.18	-0.5
2,382,034	-		GFF2360	0.21	-0.2
2,382,034	-		GFF2360	0.21	-2.0
2,382,036	+		GFF2360	0.21	-1.2
2,382,041	+		GFF2360	0.22	+0.1
2,382,043	+		GFF2360	0.22	-1.7
2,382,044	-		GFF2360	0.22	+0.5
2,382,044	-		GFF2360	0.22	-0.4
2,382,044	-		GFF2360	0.22	-1.1
2,382,049	-		GFF2360	0.23	-1.8
2,382,062	+		GFF2360	0.24	+0.5
2,382,062	+		GFF2360	0.24	-0.2
2,382,075	-		GFF2360	0.26	-1.3
2,382,083	+		GFF2360	0.27	-1.7
2,382,108	-		GFF2360	0.30	-1.3
2,382,133	+		GFF2360	0.33	-0.8
2,382,139	-		GFF2360	0.33	+1.5
2,382,143	+		GFF2360	0.34	-0.5
2,382,143	+		GFF2360	0.34	-1.6
2,382,143	+		GFF2360	0.34	-0.3
2,382,143	+		GFF2360	0.34	-0.5
2,382,144	-		GFF2360	0.34	-1.4
2,382,148	+		GFF2360	0.34	-0.9
2,382,151	-		GFF2360	0.35	+0.7
2,382,151	-		GFF2360	0.35	+0.7
2,382,153	+		GFF2360	0.35	+0.3
2,382,153	+		GFF2360	0.35	+0.0
2,382,153	+		GFF2360	0.35	-0.0
2,382,161	-		GFF2360	0.36	-0.1
2,382,161	-		GFF2360	0.36	-0.1
2,382,161	-		GFF2360	0.36	-1.0
2,382,195	+		GFF2360	0.40	+0.3
2,382,195	+		GFF2360	0.40	-0.1
2,382,198	-		GFF2360	0.40	-1.3
2,382,212	-		GFF2360	0.42	-0.2
2,382,218	+		GFF2360	0.43	-1.0
2,382,223	+		GFF2360	0.43	+0.0
2,382,249	+		GFF2360	0.46	+0.2
2,382,258	+		GFF2360	0.47	+0.2
2,382,270	+		GFF2360	0.49	+0.9
2,382,281	-		GFF2360	0.50	+0.2
2,382,343	+		GFF2360	0.57	-2.0
2,382,348	-		GFF2360	0.58	-1.5
2,382,368	+		GFF2360	0.60	-0.3
2,382,376	-		GFF2360	0.61	+0.2
2,382,377	+		GFF2360	0.61	-0.4
2,382,395	-		GFF2360	0.64	-0.5
2,382,395	-		GFF2360	0.64	-0.0
2,382,396	+		GFF2360	0.64	+0.5
2,382,404	+		GFF2360	0.65	-1.9
2,382,404	+		GFF2360	0.65	-2.5
2,382,430	-		GFF2360	0.68	+0.5
2,382,465	+		GFF2360	0.72	-1.4
2,382,465	+		GFF2360	0.72	+0.5
2,382,469	+		GFF2360	0.72	-1.0
2,382,471	+		GFF2360	0.73	-0.9
2,382,471	+		GFF2360	0.73	+1.4
2,382,471	+		GFF2360	0.73	-1.5
2,382,471	+		GFF2360	0.73	-0.3
2,382,471	+		GFF2360	0.73	-1.5
2,382,471	+		GFF2360	0.73	-1.4
2,382,473	-		GFF2360	0.73	+1.0
2,382,479	-		GFF2360	0.74	+0.4
2,382,479	-		GFF2360	0.74	-0.2
2,382,479	-		GFF2360	0.74	-0.8
2,382,479	-		GFF2360	0.74	+0.1
2,382,479	-		GFF2360	0.74	+0.8
2,382,479	-		GFF2360	0.74	-2.8
2,382,479	-		GFF2360	0.74	-1.6
2,382,479	-		GFF2360	0.74	-1.6
2,382,500	-		GFF2360	0.76	-1.6
2,382,580	+		GFF2360	0.85	-0.7
2,382,588	-		GFF2360	0.86	+0.6
2,382,588	-		GFF2360	0.86	-0.2
2,382,605	+		GFF2360	0.88	+1.2
2,382,605	+		GFF2360	0.88	-0.8
2,382,611	-		GFF2360	0.89	+1.1
2,382,611	-		GFF2360	0.89	+0.0
2,382,626	+				-0.5
2,382,645	-				-1.5
2,382,645	-				+1.1
2,382,649	+				+0.7
2,382,649	+				-0.7
2,382,649	+				+0.5
2,382,649	+				-0.9
2,382,654	+				+0.4
2,382,656	+				-2.3
2,382,657	-				+0.5
2,382,657	-				-0.3
2,382,657	-				+0.4
2,382,657	-				-0.4
2,382,657	-				+0.9
2,382,657	-				-0.5
2,382,657	-				-0.5
2,382,662	-				+0.3
2,382,662	-				-0.5
2,382,680	+				+0.5
2,382,702	-				+1.0
2,382,727	-				-1.0
2,382,728	+				-0.1
2,382,758	-				+1.5
2,382,767	+				-0.5
2,382,767	+				-1.5
2,382,767	+				-1.7
2,382,767	+				-0.3
2,382,767	+				-0.6
2,382,775	+				+1.3
2,382,775	-				+0.9
2,382,775	-				-0.2
2,382,791	+				-1.1
2,382,794	-				-0.1
2,382,796	-				-1.0
2,382,798	+				+1.2
2,382,798	+				-0.0
2,382,798	+				-0.8
2,382,798	+				-1.0
2,382,798	+				+0.5
2,382,798	+				+0.3
2,382,798	+				+0.1
2,382,798	+				-0.2
2,382,798	+				+0.9
2,382,798	+				-1.6
2,382,798	+				+0.2
2,382,798	+				-0.3
2,382,799	-				-0.3
2,382,804	-				-0.1
2,382,806	-				-0.5
2,382,806	-				-2.0
2,382,806	-				-0.3
2,382,806	-				-0.6
2,382,806	-				-0.7
2,382,806	-				-0.5
2,382,806	-				-0.2
2,382,806	-				-0.5
2,382,806	-				-0.2
2,382,810	-				+1.0
2,382,813	+		GFF2361	0.10	-0.0
2,382,814	+		GFF2361	0.10	-0.8
2,382,814	+		GFF2361	0.10	-1.9
2,382,814	+		GFF2361	0.10	-0.7
2,382,814	+		GFF2361	0.10	-0.0
2,382,814	+		GFF2361	0.10	+0.0
2,382,814	+		GFF2361	0.10	-0.5
2,382,822	-		GFF2361	0.11	+0.5
2,382,822	-		GFF2361	0.11	+0.2
2,382,822	-		GFF2361	0.11	-2.6
2,382,836	-		GFF2361	0.12	-0.1
2,382,836	-		GFF2361	0.12	-0.7
2,382,837	-		GFF2361	0.12	-2.1
2,382,862	+		GFF2361	0.15	+0.1
2,382,873	+		GFF2361	0.16	-1.1
2,382,881	-		GFF2361	0.16	-2.3
2,382,902	-		GFF2361	0.18	-1.1
2,382,909	-		GFF2361	0.19	+1.5
2,382,928	-		GFF2361	0.21	-0.2
2,382,930	+		GFF2361	0.21	-0.5
2,382,930	+		GFF2361	0.21	-1.6
2,382,936	-		GFF2361	0.21	+0.3
2,382,938	-		GFF2361	0.21	-0.1
2,382,960	-		GFF2361	0.23	-1.5
2,382,960	-		GFF2361	0.23	-0.2
2,382,973	+		GFF2361	0.25	-0.7
2,382,976	+		GFF2361	0.25	+0.1
2,382,976	+		GFF2361	0.25	+0.8
2,382,976	+		GFF2361	0.25	-1.4
2,383,030	+		GFF2361	0.30	+0.2
2,383,050	-		GFF2361	0.31	+0.9
2,383,052	+		GFF2361	0.32	+0.4
2,383,052	+		GFF2361	0.32	+0.5
2,383,065	+		GFF2361	0.33	+1.3
2,383,091	+		GFF2361	0.35	-1.8
2,383,095	-		GFF2361	0.35	-1.4
2,383,097	+		GFF2361	0.36	-0.9
2,383,097	+		GFF2361	0.36	-0.1
2,383,097	+		GFF2361	0.36	+0.7
2,383,097	+		GFF2361	0.36	+0.5
2,383,104	+		GFF2361	0.36	-0.9
2,383,105	-		GFF2361	0.36	-2.3
2,383,105	-		GFF2361	0.36	+0.0
2,383,105	-		GFF2361	0.36	+0.2
2,383,105	-		GFF2361	0.36	+1.4
2,383,105	-		GFF2361	0.36	-0.7
2,383,105	-		GFF2361	0.36	-0.9
2,383,134	+		GFF2361	0.39	-0.4
2,383,156	+		GFF2361	0.41	-0.4
2,383,159	+		GFF2361	0.41	-2.0
2,383,195	-		GFF2361	0.44	+0.3
2,383,201	-		GFF2361	0.45	-0.5
2,383,209	+		GFF2361	0.46	+0.6
2,383,211	+		GFF2361	0.46	+0.6
2,383,215	-		GFF2361	0.46	-0.3
2,383,215	-		GFF2361	0.46	-0.5
2,383,217	+		GFF2361	0.46	-0.0
2,383,217	+		GFF2361	0.46	-0.5
2,383,217	+		GFF2361	0.46	-1.2
2,383,224	+		GFF2361	0.47	+0.1
2,383,226	+		GFF2361	0.47	-0.5
2,383,226	+		GFF2361	0.47	-0.3
2,383,232	-		GFF2361	0.48	-0.3
2,383,233	-		GFF2361	0.48	+0.4
2,383,234	-		GFF2361	0.48	-1.1
2,383,239	-		GFF2361	0.48	-1.8
2,383,239	-		GFF2361	0.48	+0.4
2,383,241	+		GFF2361	0.49	+0.6
2,383,248	+		GFF2361	0.49	-1.5
2,383,248	+		GFF2361	0.49	-0.8
2,383,253	+		GFF2361	0.50	+0.1
2,383,256	-		GFF2361	0.50	+0.4
2,383,270	+		GFF2361	0.51	-0.3
2,383,278	-		GFF2361	0.52	+0.5
2,383,293	+		GFF2361	0.53	-1.7
2,383,294	+		GFF2361	0.53	-0.1
2,383,294	+		GFF2361	0.53	-0.2
2,383,294	+		GFF2361	0.53	+0.4
2,383,302	-		GFF2361	0.54	-1.6
2,383,302	-		GFF2361	0.54	-0.7
2,383,304	+		GFF2361	0.54	-2.9
2,383,326	+		GFF2361	0.56	-0.2
2,383,326	+		GFF2361	0.56	-1.1
2,383,326	+		GFF2361	0.56	-1.4
2,383,326	+		GFF2361	0.56	+0.3
2,383,326	+		GFF2361	0.56	+0.0
2,383,326	+		GFF2361	0.56	-1.6
2,383,326	+		GFF2361	0.56	+0.7
2,383,326	+		GFF2361	0.56	-0.4
2,383,326	+		GFF2361	0.56	-2.1
2,383,326	+		GFF2361	0.56	-0.1
2,383,326	+		GFF2361	0.56	-1.1
2,383,326	+		GFF2361	0.56	-2.2
2,383,326	+		GFF2361	0.56	+0.1
2,383,326	+		GFF2361	0.56	-1.0
2,383,326	+		GFF2361	0.56	+0.4
2,383,326	+		GFF2361	0.56	-0.3
2,383,334	-		GFF2361	0.57	-1.2
2,383,334	-		GFF2361	0.57	-1.3
2,383,334	-		GFF2361	0.57	+0.6
2,383,334	-		GFF2361	0.57	-1.5
2,383,334	-		GFF2361	0.57	-2.4
2,383,334	-		GFF2361	0.57	-2.2
2,383,334	-		GFF2361	0.57	-0.5
2,383,334	-		GFF2361	0.57	-0.1
2,383,334	-		GFF2361	0.57	+0.1
2,383,334	-		GFF2361	0.57	-0.5
2,383,334	-		GFF2361	0.57	+1.2
2,383,334	-		GFF2361	0.57	-2.0
2,383,334	-		GFF2361	0.57	-3.5
2,383,334	-		GFF2361	0.57	+0.4
2,383,334	-		GFF2361	0.57	+0.9
2,383,334	-		GFF2361	0.57	-0.7
2,383,334	-		GFF2361	0.57	+0.3
2,383,334	-		GFF2361	0.57	-0.9
2,383,381	+		GFF2361	0.61	-0.3
2,383,386	+		GFF2361	0.62	-1.4
2,383,386	+		GFF2361	0.62	+0.1
2,383,386	+		GFF2361	0.62	-0.3
2,383,386	+		GFF2361	0.62	+0.1
2,383,386	+		GFF2361	0.62	-0.7
2,383,386	+		GFF2361	0.62	+0.5
2,383,386	+		GFF2361	0.62	-1.5
2,383,386	+		GFF2361	0.62	-0.1
2,383,391	+		GFF2361	0.62	+0.5
2,383,394	-		GFF2361	0.62	-0.6
2,383,394	-		GFF2361	0.62	+0.1
2,383,394	-		GFF2361	0.62	-1.8
2,383,394	-		GFF2361	0.62	-0.9
2,383,394	-		GFF2361	0.62	-2.0
2,383,394	-		GFF2361	0.62	-1.0
2,383,394	-		GFF2361	0.62	-2.2
2,383,394	-		GFF2361	0.62	+0.5
2,383,394	-		GFF2361	0.62	-0.2
2,383,394	-		GFF2361	0.62	-0.7
2,383,399	-		GFF2361	0.63	-0.3
2,383,433	-		GFF2361	0.66	+0.6
2,383,460	-		GFF2361	0.68	-1.8
2,383,460	-		GFF2361	0.68	-1.5
2,383,460	-		GFF2361	0.68	-0.2
2,383,460	-		GFF2361	0.68	+0.4
2,383,465	-		GFF2361	0.69	+0.3
2,383,477	+		GFF2361	0.70	-0.5
2,383,477	+		GFF2361	0.70	+0.2
2,383,485	-		GFF2361	0.70	-1.7
2,383,487	+		GFF2361	0.71	+0.2
2,383,499	+		GFF2361	0.72	-0.7
2,383,499	+		GFF2361	0.72	+1.0
2,383,499	+		GFF2361	0.72	-1.0
2,383,499	+		GFF2361	0.72	-3.1
2,383,499	+		GFF2361	0.72	-0.4
2,383,499	+		GFF2361	0.72	-0.3
2,383,499	+		GFF2361	0.72	+0.8
2,383,499	+		GFF2361	0.72	-2.0
2,383,506	+		GFF2361	0.72	+1.0
2,383,506	+		GFF2361	0.72	-2.7
2,383,507	-		GFF2361	0.72	+0.0
2,383,507	-		GFF2361	0.72	-1.1
2,383,507	-		GFF2361	0.72	-1.2
2,383,507	-		GFF2361	0.72	-0.6
2,383,507	-		GFF2361	0.72	+0.1
2,383,507	-		GFF2361	0.72	-0.2
2,383,507	-		GFF2361	0.72	-0.8
2,383,514	-		GFF2361	0.73	+0.0
2,383,519	+		GFF2361	0.73	+0.4
2,383,535	+		GFF2361	0.75	-0.4
2,383,542	+		GFF2361	0.76	-1.3
2,383,552	+		GFF2361	0.76	-0.9
2,383,552	+		GFF2361	0.76	+0.7
2,383,558	-		GFF2361	0.77	+0.3
2,383,569	-		GFF2361	0.78	-0.4
2,383,588	-		GFF2361	0.80	-0.5
2,383,598	-		GFF2361	0.81	-0.4
2,383,599	-		GFF2361	0.81	-0.0
2,383,600	+		GFF2361	0.81	-0.3
2,383,608	-		GFF2361	0.81	-0.2
2,383,625	+		GFF2361	0.83	-2.3
2,383,631	+		GFF2361	0.84	-0.4
2,383,633	-		GFF2361	0.84	-0.3
2,383,648	-		GFF2361	0.85	-0.7
2,383,653	-		GFF2361	0.85	-1.4
2,383,659	+		GFF2361	0.86	+1.1
2,383,659	+		GFF2361	0.86	-0.5
2,383,659	+		GFF2361	0.86	+0.1
2,383,659	+		GFF2361	0.86	-1.5
2,383,659	+		GFF2361	0.86	-1.7
2,383,659	+		GFF2361	0.86	+0.2
2,383,659	+		GFF2361	0.86	+0.4
2,383,659	+		GFF2361	0.86	-0.9
2,383,659	+		GFF2361	0.86	+0.3
2,383,659	+		GFF2361	0.86	-0.6
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