Strain Fitness in Sphingobium sp. HT1-2 around GFF1759

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,787,500	+		GFF1758	0.47	-0.8
1,787,523	-		GFF1758	0.48	+0.9
1,787,523	-		GFF1758	0.48	+0.4
1,787,527	-		GFF1758	0.49	+0.5
1,787,565	-		GFF1758	0.51	-0.5
1,787,592	+		GFF1758	0.53	-0.8
1,787,592	+		GFF1758	0.53	+0.7
1,787,600	+		GFF1758	0.53	+0.7
1,787,608	-		GFF1758	0.54	-0.9
1,787,626	-		GFF1758	0.55	-1.3
1,787,721	-		GFF1758	0.60	-0.4
1,787,752	+		GFF1758	0.62	+0.1
1,787,793	-		GFF1758	0.65	+0.3
1,787,793	-		GFF1758	0.65	+1.5
1,787,835	+		GFF1758	0.67	+1.8
1,787,835	-		GFF1758	0.67	+0.1
1,787,845	-		GFF1758	0.68	+0.9
1,787,886	-		GFF1758	0.70	+1.5
1,787,896	+		GFF1758	0.71	+0.4
1,787,929	+		GFF1758	0.73	+0.0
1,787,929	+		GFF1758	0.73	-1.3
1,787,937	+		GFF1758	0.73	+0.5
1,787,937	-		GFF1758	0.73	-2.5
1,787,937	-		GFF1758	0.73	+0.2
1,787,947	+		GFF1758	0.74	+0.5
1,787,947	+		GFF1758	0.74	+0.5
1,787,963	-		GFF1758	0.75	-1.1
1,787,963	-		GFF1758	0.75	+0.9
1,787,975	+		GFF1758	0.76	+1.7
1,788,062	+		GFF1758	0.81	-0.6
1,788,062	+		GFF1758	0.81	+0.4
1,788,064	+		GFF1758	0.81	-1.8
1,788,070	-		GFF1758	0.81	-2.4
1,788,070	-		GFF1758	0.81	+0.4
1,788,070	-		GFF1758	0.81	-1.3
1,788,123	-		GFF1758	0.84	-0.1
1,788,146	-		GFF1758	0.86	-0.5
1,788,175	+		GFF1758	0.88	-0.1
1,788,175	+		GFF1758	0.88	-1.4
1,788,175	+		GFF1758	0.88	+0.4
1,788,175	+		GFF1758	0.88	-0.8
1,788,183	-		GFF1758	0.88	-1.4
1,788,183	-		GFF1758	0.88	-0.3
1,788,217	-				-0.6
1,788,247	+				+0.6
1,788,260	-				-1.6
1,788,264	+				+0.7
1,788,264	+				+0.7
1,788,272	-				+0.4
1,788,272	-				+0.6
1,788,272	-				-0.1
1,788,272	-				+0.0
1,788,272	-				-0.6
1,788,277	-				+0.5
1,788,410	-				-0.4
1,788,412	-				-0.5
1,788,458	+				-0.4
1,788,469	+				+0.5
1,788,490	+				-0.5
1,788,501	+				+0.1
1,788,506	+				-0.8
1,788,506	+				+0.4
1,788,570	+				-0.5
1,788,572	+				+0.0
1,788,576	+				-1.1
1,788,577	+				-0.3
1,788,584	-				+0.2
1,788,587	+				+0.6
1,788,587	+				+0.3
1,788,599	+				+1.3
1,788,603	-				-0.1
1,788,606	+				-0.1
1,788,611	+				-1.0
1,788,611	-				+0.7
1,788,614	-				-0.2
1,788,616	+				-0.2
1,788,621	+				-1.9
1,788,621	+				-0.8
1,788,624	-				-0.1
1,788,629	-				-0.1
1,788,629	-				-0.6
1,788,636	+		GFF1759	0.10	-2.0
1,788,636	+		GFF1759	0.10	+0.3
1,788,644	-		GFF1759	0.11	+0.3
1,788,648	-		GFF1759	0.11	+0.4
1,788,648	-		GFF1759	0.11	-0.6
1,788,648	-		GFF1759	0.11	+0.0
1,788,648	-		GFF1759	0.11	+1.3
1,788,648	-		GFF1759	0.11	-1.0
1,788,648	-		GFF1759	0.11	+1.4
1,788,676	-		GFF1759	0.13	-0.3
1,788,700	+		GFF1759	0.15	-0.5
1,788,700	+		GFF1759	0.15	-1.0
1,788,724	-		GFF1759	0.17	+0.3
1,788,724	-		GFF1759	0.17	-1.5
1,788,761	-		GFF1759	0.19	-1.1
1,788,779	-		GFF1759	0.21	+0.5
1,788,804	-		GFF1759	0.22	-1.5
1,788,855	-		GFF1759	0.26	+1.0
1,788,855	-		GFF1759	0.26	-0.9
1,788,877	+		GFF1759	0.28	-0.4
1,788,938	-		GFF1759	0.32	-0.5
1,788,966	+		GFF1759	0.34	+0.6
1,789,061	+		GFF1759	0.41	+0.9
1,789,061	+		GFF1759	0.41	+0.8
1,789,061	+		GFF1759	0.41	-1.6
1,789,069	-		GFF1759	0.42	-0.6
1,789,074	-		GFF1759	0.42	-0.1
1,789,117	-		GFF1759	0.45	-0.0
1,789,126	+		GFF1759	0.46	+1.0
1,789,133	-		GFF1759	0.47	+0.4
1,789,139	-		GFF1759	0.47	+0.4
1,789,180	-		GFF1759	0.50	+0.9
1,789,180	-		GFF1759	0.50	+0.2
1,789,204	-		GFF1759	0.52	+0.4
1,789,246	+		GFF1759	0.55	-0.5
1,789,246	-		GFF1759	0.55	-0.8
1,789,271	+		GFF1759	0.57	-2.2
1,789,276	+		GFF1759	0.57	-0.7
1,789,279	-		GFF1759	0.57	-0.5
1,789,299	+		GFF1759	0.59	-1.5
1,789,423	-		GFF1759	0.68	+0.6
1,789,481	-		GFF1759	0.72	-1.5
1,789,484	-		GFF1759	0.72	-0.1
1,789,486	-		GFF1759	0.73	-0.4
1,789,486	-		GFF1759	0.73	+0.4
1,789,492	-		GFF1759	0.73	-0.5
1,789,558	+		GFF1759	0.78	-0.4
1,789,561	-		GFF1759	0.78	+0.3
1,789,569	+		GFF1759	0.79	-0.8
1,789,600	-		GFF1759	0.81	-0.5
1,789,616	+		GFF1759	0.82	+0.2
1,789,616	+		GFF1759	0.82	+0.0
1,789,624	-		GFF1759	0.83	-0.6
1,789,675	+		GFF1759	0.87	-0.3
1,789,706	-		GFF1759	0.89	-1.6
1,789,708	+		GFF1759	0.89	+1.9
1,789,708	+		GFF1759	0.89	-0.2
1,789,716	-		GFF1759	0.90	-1.5
1,789,775	+				-2.3
1,789,817	-				+1.4
1,789,845	+				-0.3
1,789,903	+				-0.4
1,789,931	-				+0.1
1,789,954	-				-0.1
1,789,954	-				-0.2
1,789,991	+				-1.2
1,790,226	-		GFF1760	0.13	-0.5
1,790,328	-		GFF1760	0.27	+0.2
1,790,367	+		GFF1760	0.33	-1.4
1,790,404	+		GFF1760	0.38	+0.8
1,790,404	+		GFF1760	0.38	-0.5
1,790,412	-		GFF1760	0.39	+0.1
1,790,419	-		GFF1760	0.40	+1.9
1,790,428	-		GFF1760	0.41	-0.7
1,790,451	+		GFF1760	0.44	-1.4
1,790,451	+		GFF1760	0.44	-1.2
1,790,451	+		GFF1760	0.44	-0.3
1,790,454	-		GFF1760	0.45	+1.0
1,790,454	-		GFF1760	0.45	+0.5
1,790,459	-		GFF1760	0.45	+0.6
1,790,459	-		GFF1760	0.45	-1.0
1,790,469	-		GFF1760	0.47	+0.1
1,790,496	+		GFF1760	0.50	+1.0
1,790,496	+		GFF1760	0.50	+0.1
1,790,496	+		GFF1760	0.50	-0.7
1,790,496	+		GFF1760	0.50	+1.8
1,790,506	+		GFF1760	0.52	+0.1
1,790,506	+		GFF1760	0.52	-3.2
1,790,506	+		GFF1760	0.52	+0.0
1,790,506	+		GFF1760	0.52	-0.2
1,790,506	+		GFF1760	0.52	-0.3
1,790,506	+		GFF1760	0.52	+0.6
1,790,506	+		GFF1760	0.52	+0.0
1,790,506	+		GFF1760	0.52	+0.3
1,790,506	+		GFF1760	0.52	-0.3
1,790,508	-		GFF1760	0.52	-0.3
1,790,514	-		GFF1760	0.53	-0.6
1,790,514	-		GFF1760	0.53	-0.3
1,790,514	-		GFF1760	0.53	+0.1
1,790,514	-		GFF1760	0.53	-0.7
1,790,514	-		GFF1760	0.53	-0.5
1,790,521	+		GFF1760	0.54	+1.3
1,790,526	+		GFF1760	0.54	-2.4
1,790,526	+		GFF1760	0.54	+0.8
1,790,547	+		GFF1760	0.57	+1.2
1,790,562	+		GFF1760	0.59	-0.7
1,790,562	+		GFF1760	0.59	+0.1
1,790,570	-		GFF1760	0.61	-0.8
1,790,585	-		GFF1760	0.63	+0.0
1,790,598	+		GFF1760	0.64	-0.4
1,790,603	+		GFF1760	0.65	+0.6
1,790,603	+		GFF1760	0.65	+0.3
1,790,603	+		GFF1760	0.65	-0.3
1,790,611	-		GFF1760	0.66	-0.0
1,790,611	-		GFF1760	0.66	+1.1
1,790,611	-		GFF1760	0.66	-0.3
1,790,611	-		GFF1760	0.66	+0.3
1,790,611	-		GFF1760	0.66	+0.5
1,790,643	+		GFF1760	0.71	+0.1
1,790,643	+		GFF1760	0.71	+2.1
1,790,643	+		GFF1760	0.71	+1.9
1,790,643	+		GFF1760	0.71	+0.5
1,790,643	+		GFF1760	0.71	+0.1
1,790,643	+		GFF1760	0.71	-1.4
1,790,651	-		GFF1760	0.72	+0.7
1,790,651	-		GFF1760	0.72	+0.5
1,790,651	-		GFF1760	0.72	-1.6
1,790,651	-		GFF1760	0.72	+2.3
1,790,651	-		GFF1760	0.72	-0.8
1,790,653	+		GFF1760	0.72	-0.4
1,790,661	-		GFF1760	0.73	+0.4
1,790,661	-		GFF1760	0.73	+0.6
1,790,678	+		GFF1760	0.76	+0.2
1,790,716	-		GFF1760	0.81	-1.2
1,790,734	+		GFF1760	0.83	+0.6
1,790,742	-		GFF1760	0.84	-0.5
1,790,763	+		GFF1760	0.87	-0.5
1,790,770	+		GFF1760	0.88	-0.7
1,790,795	-				-0.4
1,790,795	-				+0.7
1,790,805	+				+1.3
1,790,805	+				-1.2
1,790,814	+				-2.7