Strain Fitness in Sphingobium sp. HT1-2 around GFF1432

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,460,630	+				-1.4
1,460,630	+				-1.2
1,460,630	+				-0.0
1,460,635	+				-0.6
1,460,638	-				-1.3
1,460,638	-				-0.4
1,460,638	-				-0.7
1,460,674	-				-1.1
1,460,674	-				-0.7
1,460,680	+				+0.6
1,460,705	+		GFF1431	0.11	-0.2
1,460,728	-		GFF1431	0.13	+0.7
1,460,729	+		GFF1431	0.13	+0.4
1,460,756	+		GFF1431	0.16	+0.7
1,460,759	-		GFF1431	0.16	-0.9
1,460,763	-		GFF1431	0.17	+0.3
1,460,764	-		GFF1431	0.17	-0.5
1,460,764	-		GFF1431	0.17	+1.2
1,460,764	-		GFF1431	0.17	+0.0
1,460,764	-		GFF1431	0.17	-0.9
1,460,765	+		GFF1431	0.17	+0.2
1,460,766	+		GFF1431	0.17	-0.3
1,460,771	+		GFF1431	0.18	-0.8
1,460,771	+		GFF1431	0.18	-0.3
1,460,773	-		GFF1431	0.18	+0.9
1,460,773	-		GFF1431	0.18	-0.8
1,460,779	-		GFF1431	0.18	+0.1
1,460,779	-		GFF1431	0.18	+0.6
1,460,780	-		GFF1431	0.18	+0.6
1,460,802	+		GFF1431	0.21	+0.0
1,460,802	+		GFF1431	0.21	-0.3
1,460,802	+		GFF1431	0.21	-1.6
1,460,802	+		GFF1431	0.21	-0.5
1,460,802	+		GFF1431	0.21	+0.1
1,460,802	+		GFF1431	0.21	+0.4
1,460,802	+		GFF1431	0.21	-1.1
1,460,802	+		GFF1431	0.21	+0.1
1,460,810	-		GFF1431	0.21	-0.5
1,460,810	-		GFF1431	0.21	-0.0
1,460,810	-		GFF1431	0.21	+0.3
1,460,825	-		GFF1431	0.23	-0.2
1,460,831	-		GFF1431	0.23	-1.3
1,460,841	+		GFF1431	0.24	-0.0
1,460,841	+		GFF1431	0.24	-0.6
1,460,841	+		GFF1431	0.24	-0.2
1,460,841	+		GFF1431	0.24	+0.3
1,460,841	+		GFF1431	0.24	-0.0
1,460,841	+		GFF1431	0.24	+0.0
1,460,846	+		GFF1431	0.25	-0.9
1,460,847	+		GFF1431	0.25	-0.4
1,460,847	+		GFF1431	0.25	-0.4
1,460,849	-		GFF1431	0.25	-0.7
1,460,849	-		GFF1431	0.25	-0.3
1,460,849	-		GFF1431	0.25	+0.1
1,460,849	-		GFF1431	0.25	-1.0
1,460,849	-		GFF1431	0.25	+0.1
1,460,849	-		GFF1431	0.25	-2.4
1,460,860	-		GFF1431	0.26	+1.1
1,460,864	+		GFF1431	0.27	-0.2
1,460,872	-		GFF1431	0.27	+0.6
1,460,876	-		GFF1431	0.28	+1.0
1,460,877	+		GFF1431	0.28	+0.6
1,460,892	-		GFF1431	0.29	-0.3
1,460,903	+		GFF1431	0.30	+0.2
1,460,909	+		GFF1431	0.31	-1.3
1,460,909	+		GFF1431	0.31	-0.1
1,460,910	+		GFF1431	0.31	+0.4
1,460,910	+		GFF1431	0.31	-0.3
1,460,910	+		GFF1431	0.31	-0.8
1,460,910	+		GFF1431	0.31	+0.1
1,460,918	-		GFF1431	0.32	+0.5
1,460,918	-		GFF1431	0.32	+0.7
1,460,920	+		GFF1431	0.32	+0.4
1,460,951	-		GFF1431	0.35	+0.9
1,460,971	+		GFF1431	0.37	-2.0
1,460,976	+		GFF1431	0.38	-1.3
1,460,981	+		GFF1431	0.38	-0.7
1,460,981	+		GFF1431	0.38	-0.3
1,460,981	+		GFF1431	0.38	+0.6
1,460,981	+		GFF1431	0.38	-0.2
1,460,984	-		GFF1431	0.38	-0.5
1,460,984	-		GFF1431	0.38	+0.2
1,460,984	-		GFF1431	0.38	+0.1
1,460,989	-		GFF1431	0.39	-0.9
1,460,989	-		GFF1431	0.39	+0.2
1,460,989	-		GFF1431	0.39	+0.2
1,461,005	+		GFF1431	0.40	+1.0
1,461,005	+		GFF1431	0.40	-0.2
1,461,005	+		GFF1431	0.40	-0.5
1,461,006	+		GFF1431	0.41	+0.5
1,461,006	+		GFF1431	0.41	+0.4
1,461,006	+		GFF1431	0.41	-1.1
1,461,013	-		GFF1431	0.41	-0.9
1,461,019	-		GFF1431	0.42	-2.3
1,461,027	-		GFF1431	0.43	+0.6
1,461,035	-		GFF1431	0.43	+0.6
1,461,054	-		GFF1431	0.45	-2.0
1,461,056	+		GFF1431	0.45	-0.7
1,461,067	+		GFF1431	0.47	-0.1
1,461,067	+		GFF1431	0.47	+0.4
1,461,071	-		GFF1431	0.47	+0.4
1,461,075	-		GFF1431	0.47	-0.4
1,461,099	-		GFF1431	0.50	+0.6
1,461,100	+		GFF1431	0.50	+0.7
1,461,108	-		GFF1431	0.51	+0.3
1,461,108	-		GFF1431	0.51	-0.2
1,461,108	-		GFF1431	0.51	+0.4
1,461,114	+		GFF1431	0.51	-1.8
1,461,121	+		GFF1431	0.52	+0.0
1,461,121	+		GFF1431	0.52	+0.9
1,461,121	+		GFF1431	0.52	-1.3
1,461,121	+		GFF1431	0.52	+0.1
1,461,126	+		GFF1431	0.52	+0.1
1,461,126	+		GFF1431	0.52	-0.0
1,461,126	+		GFF1431	0.52	-0.2
1,461,126	+		GFF1431	0.52	+0.7
1,461,126	+		GFF1431	0.52	-1.2
1,461,128	-		GFF1431	0.53	-1.1
1,461,129	-		GFF1431	0.53	-1.1
1,461,129	-		GFF1431	0.53	+0.6
1,461,129	-		GFF1431	0.53	+0.5
1,461,129	-		GFF1431	0.53	-1.0
1,461,129	-		GFF1431	0.53	-1.4
1,461,129	-		GFF1431	0.53	-0.3
1,461,129	-		GFF1431	0.53	-0.6
1,461,129	-		GFF1431	0.53	+0.9
1,461,134	-		GFF1431	0.53	-0.6
1,461,134	-		GFF1431	0.53	-1.3
1,461,167	-		GFF1431	0.56	-0.5
1,461,169	+		GFF1431	0.57	+0.8
1,461,169	+		GFF1431	0.57	+1.6
1,461,169	+		GFF1431	0.57	-0.2
1,461,174	+		GFF1431	0.57	+0.3
1,461,174	+		GFF1431	0.57	-0.2
1,461,175	+		GFF1431	0.57	+0.7
1,461,177	-		GFF1431	0.57	-1.4
1,461,177	-		GFF1431	0.57	+0.1
1,461,182	-		GFF1431	0.58	-0.0
1,461,193	-		GFF1431	0.59	-0.8
1,461,212	+		GFF1431	0.61	-0.1
1,461,239	-		GFF1431	0.63	+0.3
1,461,257	+		GFF1431	0.65	-0.9
1,461,286	-		GFF1431	0.68	+0.1
1,461,287	+		GFF1431	0.68	+0.3
1,461,293	-		GFF1431	0.69	-1.0
1,461,297	+		GFF1431	0.69	+0.3
1,461,323	+		GFF1431	0.72	-0.1
1,461,323	+		GFF1431	0.72	+0.2
1,461,323	+		GFF1431	0.72	+1.3
1,461,323	+		GFF1431	0.72	-0.1
1,461,323	+		GFF1431	0.72	+0.7
1,461,330	-		GFF1431	0.72	+1.0
1,461,331	-		GFF1431	0.72	-0.1
1,461,331	-		GFF1431	0.72	+0.2
1,461,331	-		GFF1431	0.72	-0.1
1,461,331	-		GFF1431	0.72	-1.0
1,461,331	-		GFF1431	0.72	-1.6
1,461,331	-		GFF1431	0.72	+0.2
1,461,331	-		GFF1431	0.72	-0.4
1,461,331	-		GFF1431	0.72	-0.6
1,461,331	-		GFF1431	0.72	-0.9
1,461,338	+		GFF1431	0.73	-0.8
1,461,343	+		GFF1431	0.74	+0.0
1,461,343	+		GFF1431	0.74	-2.0
1,461,346	-		GFF1431	0.74	+0.2
1,461,346	-		GFF1431	0.74	-2.0
1,461,346	-		GFF1431	0.74	-0.3
1,461,346	-		GFF1431	0.74	-2.0
1,461,346	-		GFF1431	0.74	-0.3
1,461,346	-		GFF1431	0.74	-0.0
1,461,351	-		GFF1431	0.74	-0.3
1,461,361	-		GFF1431	0.75	+0.5
1,461,374	-		GFF1431	0.77	-0.8
1,461,388	+		GFF1431	0.78	+0.4
1,461,422	-		GFF1431	0.81	-0.9
1,461,458	+		GFF1431	0.85	-2.3
1,461,458	+		GFF1431	0.85	+0.8
1,461,466	-		GFF1431	0.86	+0.1
1,461,466	-		GFF1431	0.86	-0.7
1,461,466	-		GFF1431	0.86	-0.4
1,461,467	-		GFF1431	0.86	-2.1
1,461,467	-		GFF1431	0.86	+0.7
1,461,477	+		GFF1431	0.87	-0.3
1,461,482	+		GFF1431	0.87	+0.2
1,461,482	+		GFF1431	0.87	+0.2
1,461,491	+		GFF1431	0.88	+0.2
1,461,491	+		GFF1431	0.88	-1.6
1,461,491	+		GFF1431	0.88	-1.0
1,461,491	+		GFF1431	0.88	-0.1
1,461,491	+		GFF1431	0.88	-1.3
1,461,491	+		GFF1431	0.88	+0.9
1,461,491	+		GFF1431	0.88	-0.7
1,461,499	-		GFF1431	0.89	-0.4
1,461,499	-		GFF1431	0.89	-0.7
1,461,499	-		GFF1431	0.89	-0.1
1,461,515	+				-1.3
1,461,531	+				+0.2
1,461,550	+				-0.4
1,461,558	-				+1.7
1,461,560	+				-0.4
1,461,568	-				-1.1
1,461,569	+				-0.7
1,461,569	+				-0.2
1,461,569	+				+1.1
1,461,577	-				+0.2
1,461,577	-				-1.1
1,461,605	+				+1.4
1,461,605	+				-0.3
1,461,605	+				-0.3
1,461,613	-				+0.3
1,461,623	-				-0.8
1,461,623	-				-1.3
1,461,625	+				+0.3
1,461,627	+				+0.3
1,461,627	+				-2.4
1,461,635	-				-0.4
1,461,661	+				-1.2
1,461,669	-				-1.0
1,461,669	-				+0.6
1,461,684	-				+0.9
1,461,698	+				-0.7
1,461,698	+				-1.3
1,461,703	+				+0.1
1,461,706	-				-0.4
1,461,706	-				-1.7
1,461,706	-				+0.9
1,461,706	-				-2.4
1,461,707	+				-0.3
1,461,711	-				+0.1
1,461,711	-				+0.0
1,461,713	+				-1.3
1,461,715	+				+0.3
1,461,715	+				-1.3
1,461,721	-		GFF1432	0.10	-1.0
1,461,764	-		GFF1432	0.15	+0.1
1,461,796	+		GFF1432	0.18	+1.2
1,461,812	+		GFF1432	0.20	+0.7
1,461,819	-		GFF1432	0.21	-1.9
1,461,822	+		GFF1432	0.21	+0.6
1,461,881	+		GFF1432	0.28	-0.2
1,461,889	-		GFF1432	0.29	-0.6
1,461,889	-		GFF1432	0.29	+0.7
1,461,935	+		GFF1432	0.34	+0.7
1,461,943	-		GFF1432	0.35	-0.8
1,461,945	-		GFF1432	0.35	+0.5
1,461,952	+		GFF1432	0.36	-1.1
1,461,952	+		GFF1432	0.36	+0.6
1,461,952	+		GFF1432	0.36	-1.0
1,461,960	-		GFF1432	0.37	-0.2
1,461,960	-		GFF1432	0.37	+0.9
1,461,963	-		GFF1432	0.37	-0.1
1,461,978	+		GFF1432	0.39	+0.9
1,461,986	-		GFF1432	0.40	-0.0
1,461,997	+		GFF1432	0.41	-0.2
1,462,005	-		GFF1432	0.42	+2.5
1,462,014	+		GFF1432	0.43	-0.3
1,462,014	+		GFF1432	0.43	-1.4
1,462,017	-		GFF1432	0.43	-1.0
1,462,018	+		GFF1432	0.43	-1.8
1,462,026	-		GFF1432	0.44	-0.5
1,462,047	-		GFF1432	0.46	-1.0
1,462,057	-		GFF1432	0.47	-1.7
1,462,062	-		GFF1432	0.48	-1.4
1,462,076	+		GFF1432	0.50	-1.1
1,462,077	+		GFF1432	0.50	-0.7
1,462,084	-		GFF1432	0.50	+0.3
1,462,086	-		GFF1432	0.51	-0.4
1,462,086	-		GFF1432	0.51	-2.7
1,462,107	-		GFF1432	0.53	+0.3
1,462,107	-		GFF1432	0.53	+0.5
1,462,111	-		GFF1432	0.53	+1.1
1,462,132	-		GFF1432	0.56	-0.8
1,462,175	+		GFF1432	0.61	-1.7
1,462,183	-		GFF1432	0.61	-0.1
1,462,190	+		GFF1432	0.62	-0.4
1,462,190	+		GFF1432	0.62	-0.0
1,462,190	+		GFF1432	0.62	-0.5
1,462,190	+		GFF1432	0.62	-0.3
1,462,190	+		GFF1432	0.62	-0.3
1,462,190	+		GFF1432	0.62	+0.3
1,462,190	+		GFF1432	0.62	+0.0
1,462,198	-		GFF1432	0.63	-0.6
1,462,198	-		GFF1432	0.63	-1.6
1,462,198	-		GFF1432	0.63	-0.3
1,462,198	-		GFF1432	0.63	-0.2
1,462,198	-		GFF1432	0.63	-0.2
1,462,198	-		GFF1432	0.63	-0.4
1,462,198	-		GFF1432	0.63	-1.0
1,462,213	-		GFF1432	0.65	-0.7
1,462,215	+		GFF1432	0.65	-1.4
1,462,220	+		GFF1432	0.66	-0.9
1,462,220	+		GFF1432	0.66	-0.8
1,462,220	+		GFF1432	0.66	-1.4
1,462,223	-		GFF1432	0.66	+0.2
1,462,238	-		GFF1432	0.68	+0.3
1,462,238	-		GFF1432	0.68	+0.1
1,462,238	-		GFF1432	0.68	+0.3
1,462,247	-		GFF1432	0.69	-0.2
1,462,263	+		GFF1432	0.70	+0.4
1,462,302	+		GFF1432	0.75	+0.2
1,462,305	-		GFF1432	0.75	-2.2
1,462,307	+		GFF1432	0.75	-0.9
1,462,307	+		GFF1432	0.75	-0.6
1,462,310	-		GFF1432	0.76	-1.4
1,462,312	+		GFF1432	0.76	-1.4
1,462,312	+		GFF1432	0.76	-0.2
1,462,312	+		GFF1432	0.76	+0.1
1,462,312	+		GFF1432	0.76	-1.5
1,462,312	+		GFF1432	0.76	-1.5
1,462,312	+		GFF1432	0.76	+0.0
1,462,312	+		GFF1432	0.76	+0.5
1,462,312	+		GFF1432	0.76	+0.4
1,462,312	+		GFF1432	0.76	-1.0
1,462,312	+		GFF1432	0.76	+0.9
1,462,312	+		GFF1432	0.76	-2.0
1,462,317	+		GFF1432	0.76	-1.8
1,462,317	+		GFF1432	0.76	-0.1
1,462,317	+		GFF1432	0.76	+0.5
1,462,317	+		GFF1432	0.76	-2.1
1,462,317	+		GFF1432	0.76	-0.3
1,462,317	+		GFF1432	0.76	-0.3
1,462,320	-		GFF1432	0.77	-0.0
1,462,320	-		GFF1432	0.77	+0.3
1,462,320	-		GFF1432	0.77	-0.4
1,462,320	-		GFF1432	0.77	+0.7
1,462,320	-		GFF1432	0.77	-1.1
1,462,320	-		GFF1432	0.77	+0.9
1,462,320	-		GFF1432	0.77	+0.3
1,462,320	-		GFF1432	0.77	-1.7
1,462,320	-		GFF1432	0.77	-0.2
1,462,320	-		GFF1432	0.77	-1.7
1,462,320	-		GFF1432	0.77	-1.7
1,462,320	-		GFF1432	0.77	-0.3
1,462,320	-		GFF1432	0.77	-0.6
1,462,325	-		GFF1432	0.77	+0.7
1,462,325	-		GFF1432	0.77	-2.4
1,462,325	-		GFF1432	0.77	-0.6
1,462,325	-		GFF1432	0.77	-0.3
1,462,330	-		GFF1432	0.78	-0.4
1,462,330	-		GFF1432	0.78	+0.3
1,462,330	-		GFF1432	0.78	+0.9
1,462,343	+		GFF1432	0.79	-0.2
1,462,359	+		GFF1432	0.81	-0.6
1,462,362	+		GFF1432	0.81	-1.4
1,462,384	+		GFF1432	0.84	+0.9
1,462,386	-		GFF1432	0.84	+0.1
1,462,392	-		GFF1432	0.85	-1.1
1,462,415	+		GFF1432	0.87	-1.6
1,462,427	+		GFF1432	0.89	-0.3
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