Strain Fitness in Sphingobium sp. HT1-2 around GFF4850

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,831,764	+				-0.0
4,831,770	-				+1.1
4,831,772	+				-1.1
4,831,772	+				-1.7
4,831,780	-				+0.7
4,831,780	-				-1.1
4,831,781	-				+0.3
4,831,799	-				-0.7
4,831,818	+				-0.1
4,831,837	+				-0.7
4,831,848	+				-0.4
4,831,850	+		GFF4849	0.10	+1.2
4,831,850	+		GFF4849	0.10	-0.8
4,831,856	-		GFF4849	0.12	+0.9
4,831,856	-		GFF4849	0.12	+0.0
4,831,858	-		GFF4849	0.12	-0.6
4,831,858	-		GFF4849	0.12	+0.3
4,831,863	-		GFF4849	0.14	-0.9
4,831,870	+		GFF4849	0.15	+0.6
4,831,873	-		GFF4849	0.16	-0.4
4,831,873	-		GFF4849	0.16	-0.2
4,831,886	+		GFF4849	0.19	-1.9
4,831,912	+		GFF4849	0.26	-2.2
4,831,920	-		GFF4849	0.28	-0.1
4,831,930	+		GFF4849	0.30	-0.2
4,831,936	+		GFF4849	0.32	+1.3
4,831,963	+		GFF4849	0.38	+1.3
4,831,976	+		GFF4849	0.41	+0.4
4,832,008	+		GFF4849	0.49	+0.1
4,832,027	+		GFF4849	0.54	+0.6
4,832,038	-		GFF4849	0.57	+1.2
4,832,039	+		GFF4849	0.57	-0.1
4,832,061	+		GFF4849	0.62	+0.1
4,832,061	+		GFF4849	0.62	-1.9
4,832,069	+		GFF4849	0.64	+0.6
4,832,077	-		GFF4849	0.66	+1.3
4,832,077	-		GFF4849	0.66	-0.8
4,832,082	+		GFF4849	0.68	-1.8
4,832,085	-		GFF4849	0.68	+0.3
4,832,087	+		GFF4849	0.69	-0.3
4,832,087	+		GFF4849	0.69	+0.4
4,832,087	+		GFF4849	0.69	+0.9
4,832,092	+		GFF4849	0.70	+0.2
4,832,100	-		GFF4849	0.72	+0.9
4,832,107	+		GFF4849	0.74	-1.6
4,832,115	-		GFF4849	0.76	+0.6
4,832,115	-		GFF4849	0.76	-0.2
4,832,132	+		GFF4849	0.80	+0.4
4,832,160	-		GFF4849	0.87	+0.1
4,832,182	-				+0.1
4,832,223	+				+1.9
4,832,273	+				-1.1
4,832,273	+				+1.3
4,832,273	+				-0.8
4,832,274	+				-0.2
4,832,279	+				+0.7
4,832,311	+				+0.6
4,832,312	+				-0.4
4,832,372	+				+0.1
4,832,380	-				+0.5
4,832,380	-				+0.9
4,832,386	-				+0.1
4,832,400	+				+1.7
4,832,400	+				-0.1
4,832,408	-				+1.0
4,832,408	-				+0.5
4,832,408	-				+0.7
4,832,440	+				-0.4
4,832,445	-				+0.4
4,832,452	+				-0.4
4,832,458	-				+0.0
4,832,483	-				-2.2
4,832,500	+				+0.8
4,832,500	+				+0.8
4,832,507	+				+0.3
4,832,508	-				-1.6
4,832,508	-				-0.9
4,832,508	-				+0.2
4,832,508	-				+0.6
4,832,508	-				+1.4
4,832,514	-				+0.2
4,832,514	-				+0.2
4,832,514	-				+1.4
4,832,514	-				+0.4
4,832,514	-				-0.2
4,832,554	+				+0.1
4,832,554	+				+0.3
4,832,554	+				+1.1
4,832,554	+				+1.7
4,832,554	+				+0.4
4,832,554	+				-0.2
4,832,554	+				+0.5
4,832,554	+				-0.9
4,832,562	-				+1.0
4,832,562	-				+0.7
4,832,562	-				-0.3
4,832,589	+				-1.6
4,832,589	+				+0.9
4,832,597	-				+0.0
4,832,619	-				-0.3
4,832,623	-				-0.4
4,832,626	+				-1.1
4,832,633	-				+0.4
4,832,645	-				+0.2
4,832,660	+				-0.3
4,832,660	+				-0.9
4,832,660	+				-0.9
4,832,660	+				+1.2
4,832,668	-				-0.1
4,832,668	-				-0.3
4,832,668	-				+0.1
4,832,668	-				-0.7
4,832,668	-				+1.0
4,832,683	-				+1.0
4,832,683	-				+0.0
4,832,683	-				+0.6
4,832,710	-				+0.7
4,832,730	+				+0.6
4,832,770	+				-0.8
4,832,775	+				-2.6
4,832,775	+				-0.4
4,832,786	+				+0.7
4,832,786	+				-1.4
4,832,789	-				+0.8
4,832,814	+		GFF4850	0.14	+0.4
4,832,816	-		GFF4850	0.14	+0.6
4,832,816	-		GFF4850	0.14	+0.1
4,832,818	-		GFF4850	0.15	+0.2
4,832,820	+		GFF4850	0.15	-0.7
4,832,830	+		GFF4850	0.18	+0.6
4,832,835	+		GFF4850	0.19	+1.2
4,832,843	-		GFF4850	0.21	+1.7
4,832,846	-		GFF4850	0.22	+0.1
4,832,855	+		GFF4850	0.24	+0.9
4,832,862	+		GFF4850	0.26	-0.0
4,832,865	+		GFF4850	0.27	-0.6
4,832,865	+		GFF4850	0.27	-0.6
4,832,873	-		GFF4850	0.29	-0.1
4,832,873	-		GFF4850	0.29	+1.3
4,832,875	-		GFF4850	0.29	+1.8
4,832,897	+		GFF4850	0.35	-0.2
4,832,905	-		GFF4850	0.37	-0.0
4,832,951	-		GFF4850	0.49	-1.7
4,832,954	+		GFF4850	0.50	-0.1
4,832,955	+		GFF4850	0.50	+0.0
4,832,955	+		GFF4850	0.50	-1.3
4,832,955	+		GFF4850	0.50	-1.1
4,832,963	-		GFF4850	0.52	+0.6
4,832,963	-		GFF4850	0.52	-0.3
4,832,963	-		GFF4850	0.52	+0.8
4,832,963	-		GFF4850	0.52	-0.0
4,833,014	+		GFF4850	0.66	-0.5
4,833,014	+		GFF4850	0.66	+0.4
4,833,014	+		GFF4850	0.66	+0.4
4,833,014	+		GFF4850	0.66	-0.9
4,833,014	+		GFF4850	0.66	-0.4
4,833,014	+		GFF4850	0.66	-0.2
4,833,015	-		GFF4850	0.66	-1.5
4,833,017	-		GFF4850	0.66	+1.0
4,833,017	-		GFF4850	0.66	+1.3
4,833,017	-		GFF4850	0.66	-1.9
4,833,022	-		GFF4850	0.68	+0.5
4,833,022	-		GFF4850	0.68	-0.1
4,833,022	-		GFF4850	0.68	+0.7
4,833,022	-		GFF4850	0.68	-0.7
4,833,022	-		GFF4850	0.68	+0.2
4,833,022	-		GFF4850	0.68	-0.7
4,833,022	-		GFF4850	0.68	+0.1
4,833,022	-		GFF4850	0.68	+0.0
4,833,022	-		GFF4850	0.68	-0.6
4,833,022	-		GFF4850	0.68	-0.5
4,833,024	+		GFF4850	0.68	-0.9
4,833,027	-		GFF4850	0.69	+1.3
4,833,027	-		GFF4850	0.69	+0.2
4,833,042	+		GFF4850	0.73	+0.6
4,833,047	+		GFF4850	0.74	-0.7
4,833,052	-		GFF4850	0.76	-0.7
4,833,054	-		GFF4850	0.76	+0.6
4,833,076	+		GFF4850	0.82	+0.2
4,833,076	+		GFF4850	0.82	-1.2
4,833,084	+		GFF4850	0.84	+0.9
4,833,112	+				-0.5
4,833,118	-				-0.1
4,833,124	-				-0.5
4,833,125	+				+0.7
4,833,133	-				-0.0
4,833,165	+				+1.1
4,833,230	+				-0.2
4,833,230	+				-1.6
4,833,233	-				-1.0
4,833,238	-				-0.9
4,833,238	-				+0.2
4,833,251	+				+0.3
4,833,259	-				-0.7
4,833,259	-				+1.3
4,833,264	-				+1.0
4,833,266	+				-0.6
4,833,274	-				-0.4
4,833,274	-				-1.9
4,833,274	-				-0.6
4,833,291	-				+0.4
4,833,366	-				-1.1
4,833,382	+				+0.7
4,833,382	+				-1.9
4,833,382	+				-0.9
4,833,383	-				+1.9
4,833,388	-				+0.6
4,833,390	-				-0.1
4,833,392	+				-0.4
4,833,395	+				-2.2
4,833,440	+				-1.0
4,833,446	+				+0.4
4,833,446	+				-0.3
4,833,451	+				-0.8
4,833,451	+				+0.1
4,833,451	+				-0.9
4,833,454	-				-0.6
4,833,459	-				-0.0
4,833,459	-				-0.5
4,833,468	+				+0.1
4,833,485	+				+0.0
4,833,492	-				+0.5
4,833,496	-		GFF4851	0.10	-0.3
4,833,510	+		GFF4851	0.10	-1.4
4,833,518	-		GFF4851	0.11	+1.2
4,833,518	-		GFF4851	0.11	+1.5
4,833,529	-		GFF4851	0.11	-1.2
4,833,529	-		GFF4851	0.11	-1.0
4,833,540	+		GFF4851	0.11	-0.7
4,833,548	-		GFF4851	0.12	-0.6
4,833,553	+		GFF4851	0.12	-0.2
4,833,555	-		GFF4851	0.12	-0.4
4,833,561	-		GFF4851	0.12	-0.6
4,833,584	+		GFF4851	0.13	-1.1
4,833,584	+		GFF4851	0.13	+0.4
4,833,584	+		GFF4851	0.13	-2.3
4,833,584	+		GFF4851	0.13	-0.3
4,833,592	-		GFF4851	0.13	-0.3
4,833,621	+		GFF4851	0.14	+0.5
4,833,621	+		GFF4851	0.14	+1.3
4,833,637	+		GFF4851	0.14	+0.4
4,833,637	+		GFF4851	0.14	-0.8
4,833,639	+		GFF4851	0.14	-0.6
4,833,642	+		GFF4851	0.14	+0.1
4,833,644	-		GFF4851	0.14	+1.1
4,833,659	+		GFF4851	0.15	-1.9
4,833,659	+		GFF4851	0.15	+0.4
4,833,659	+		GFF4851	0.15	+1.2
4,833,673	+		GFF4851	0.15	-1.0
4,833,709	-		GFF4851	0.16	+1.1
4,833,718	-		GFF4851	0.17	+0.1
4,833,720	+		GFF4851	0.17	+1.0
4,833,720	+		GFF4851	0.17	+0.2
4,833,720	+		GFF4851	0.17	+0.9
4,833,720	+		GFF4851	0.17	+0.0
4,833,720	+		GFF4851	0.17	+0.8
4,833,720	+		GFF4851	0.17	+0.3
4,833,720	+		GFF4851	0.17	-2.8
4,833,720	+		GFF4851	0.17	+0.6
4,833,724	-		GFF4851	0.17	+1.7
4,833,728	-		GFF4851	0.17	-0.2
4,833,728	-		GFF4851	0.17	-0.2
4,833,728	-		GFF4851	0.17	-0.2
4,833,728	-		GFF4851	0.17	+0.2
4,833,728	-		GFF4851	0.17	+0.5
4,833,766	+		GFF4851	0.18	+0.1
4,833,767	+		GFF4851	0.18	-1.2
4,833,775	-		GFF4851	0.18	-0.2
4,833,781	-		GFF4851	0.18	+0.7
4,833,787	+		GFF4851	0.19	-0.1
4,833,813	+		GFF4851	0.19	-0.4
4,833,843	+		GFF4851	0.20	-0.4
4,833,843	-		GFF4851	0.20	+0.0
4,833,857	-		GFF4851	0.21	-0.8
4,833,862	-		GFF4851	0.21	-0.7
4,833,887	+		GFF4851	0.22	-1.2
4,833,887	+		GFF4851	0.22	+1.3
4,833,887	+		GFF4851	0.22	+0.2
4,833,893	+		GFF4851	0.22	+0.1
4,833,893	+		GFF4851	0.22	+1.0
4,833,895	-		GFF4851	0.22	+0.9
4,833,900	-		GFF4851	0.22	+1.3
4,833,960	-		GFF4851	0.24	-1.7
4,834,076	+		GFF4851	0.27	+0.1
4,834,079	+		GFF4851	0.27	-0.2
4,834,089	-		GFF4851	0.27	+0.5
4,834,111	-		GFF4851	0.28	+0.4
4,834,111	-		GFF4851	0.28	-0.5
4,834,116	-		GFF4851	0.28	-0.3
4,834,128	+		GFF4851	0.29	+0.5
4,834,138	-		GFF4851	0.29	-0.5