Strain Fitness in Sphingobium sp. HT1-2 around GFF4629

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,625,504	+		GFF4628	0.27	-0.1
4,625,515	+		GFF4628	0.28	-1.2
4,625,525	-		GFF4628	0.29	-0.9
4,625,527	-		GFF4628	0.29	-0.2
4,625,540	+		GFF4628	0.30	-1.4
4,625,545	+		GFF4628	0.30	-1.3
4,625,545	+		GFF4628	0.30	-0.9
4,625,573	+		GFF4628	0.32	-0.3
4,625,579	-		GFF4628	0.32	-0.4
4,625,602	+		GFF4628	0.34	-1.1
4,625,602	+		GFF4628	0.34	-1.4
4,625,620	+		GFF4628	0.35	-0.9
4,625,620	+		GFF4628	0.35	-1.3
4,625,620	+		GFF4628	0.35	+0.2
4,625,627	+		GFF4628	0.36	-1.6
4,625,628	-		GFF4628	0.36	-1.3
4,625,633	-		GFF4628	0.36	-0.5
4,625,644	+		GFF4628	0.37	-1.1
4,625,649	+		GFF4628	0.38	-0.7
4,625,661	+		GFF4628	0.38	+0.3
4,625,661	+		GFF4628	0.38	+0.0
4,625,661	+		GFF4628	0.38	-1.0
4,625,661	+		GFF4628	0.38	+0.3
4,625,661	+		GFF4628	0.38	+0.1
4,625,669	-		GFF4628	0.39	-1.4
4,625,683	-		GFF4628	0.40	-0.0
4,625,683	-		GFF4628	0.40	+0.1
4,625,683	-		GFF4628	0.40	-1.6
4,625,699	-		GFF4628	0.41	-2.2
4,625,708	+		GFF4628	0.42	+0.3
4,625,716	-		GFF4628	0.42	-1.2
4,625,721	-		GFF4628	0.43	-1.1
4,625,740	+		GFF4628	0.44	-1.6
4,625,750	+		GFF4628	0.45	-2.5
4,625,754	+		GFF4628	0.45	+0.5
4,625,754	+		GFF4628	0.45	+1.4
4,625,762	-		GFF4628	0.46	+1.2
4,625,762	-		GFF4628	0.46	+0.7
4,625,762	-		GFF4628	0.46	-0.3
4,625,762	-		GFF4628	0.46	-1.7
4,625,796	+		GFF4628	0.48	-3.1
4,625,813	+		GFF4628	0.50	+0.0
4,625,813	+		GFF4628	0.50	-0.9
4,625,813	+		GFF4628	0.50	+0.7
4,625,821	-		GFF4628	0.50	+0.6
4,625,821	-		GFF4628	0.50	-0.5
4,625,821	-		GFF4628	0.50	-0.2
4,625,821	-		GFF4628	0.50	-1.1
4,625,823	+		GFF4628	0.50	-0.6
4,625,823	+		GFF4628	0.50	-0.4
4,625,831	-		GFF4628	0.51	-0.8
4,625,833	+		GFF4628	0.51	-0.2
4,625,836	+		GFF4628	0.51	-1.2
4,625,841	-		GFF4628	0.52	+0.3
4,625,844	-		GFF4628	0.52	-0.3
4,625,849	+		GFF4628	0.52	-1.7
4,625,859	+		GFF4628	0.53	+0.1
4,625,878	-		GFF4628	0.54	-0.5
4,625,887	-		GFF4628	0.55	-1.8
4,625,912	+		GFF4628	0.57	-0.8
4,625,920	-		GFF4628	0.57	+1.5
4,625,928	-		GFF4628	0.58	-0.2
4,625,929	+		GFF4628	0.58	-1.7
4,625,933	+		GFF4628	0.58	-0.0
4,625,937	-		GFF4628	0.59	-0.3
4,625,939	+		GFF4628	0.59	-1.1
4,625,951	+		GFF4628	0.60	-1.2
4,625,951	+		GFF4628	0.60	-0.4
4,625,959	-		GFF4628	0.60	-0.9
4,625,959	-		GFF4628	0.60	-1.1
4,625,959	-		GFF4628	0.60	-1.2
4,625,959	-		GFF4628	0.60	-0.0
4,625,969	-		GFF4628	0.61	+0.0
4,625,977	-		GFF4628	0.61	+0.3
4,625,992	-		GFF4628	0.63	-1.9
4,625,992	-		GFF4628	0.63	-0.5
4,625,999	-		GFF4628	0.63	-0.9
4,626,000	+		GFF4628	0.63	+0.5
4,626,031	+		GFF4628	0.65	+0.3
4,626,031	+		GFF4628	0.65	-1.1
4,626,031	+		GFF4628	0.65	-1.1
4,626,031	+		GFF4628	0.65	-0.3
4,626,031	+		GFF4628	0.65	-0.2
4,626,031	+		GFF4628	0.65	-2.3
4,626,031	+		GFF4628	0.65	-0.4
4,626,031	+		GFF4628	0.65	+1.7
4,626,031	+		GFF4628	0.65	+0.0
4,626,031	+		GFF4628	0.65	-0.8
4,626,031	+		GFF4628	0.65	-1.0
4,626,039	-		GFF4628	0.66	+1.2
4,626,039	-		GFF4628	0.66	-0.6
4,626,039	-		GFF4628	0.66	-1.2
4,626,039	-		GFF4628	0.66	+0.3
4,626,039	-		GFF4628	0.66	+1.1
4,626,039	-		GFF4628	0.66	-0.4
4,626,039	-		GFF4628	0.66	-0.3
4,626,039	-		GFF4628	0.66	+0.2
4,626,039	-		GFF4628	0.66	+0.5
4,626,039	-		GFF4628	0.66	-0.6
4,626,039	-		GFF4628	0.66	-1.5
4,626,039	-		GFF4628	0.66	-0.4
4,626,039	-		GFF4628	0.66	-0.5
4,626,039	-		GFF4628	0.66	-2.0
4,626,039	-		GFF4628	0.66	-0.7
4,626,040	-		GFF4628	0.66	+0.3
4,626,040	-		GFF4628	0.66	-1.3
4,626,040	-		GFF4628	0.66	-0.6
4,626,040	-		GFF4628	0.66	+0.4
4,626,050	+		GFF4628	0.67	-0.2
4,626,058	-		GFF4628	0.67	-0.7
4,626,059	+		GFF4628	0.67	-1.2
4,626,102	-		GFF4628	0.71	-0.3
4,626,107	-		GFF4628	0.71	-0.6
4,626,107	-		GFF4628	0.71	-1.4
4,626,108	+		GFF4628	0.71	-0.1
4,626,116	-		GFF4628	0.72	+0.0
4,626,134	+		GFF4628	0.73	-0.6
4,626,134	+		GFF4628	0.73	+0.7
4,626,134	+		GFF4628	0.73	-0.1
4,626,139	+		GFF4628	0.73	-0.5
4,626,139	+		GFF4628	0.73	-2.2
4,626,142	-		GFF4628	0.74	+1.3
4,626,142	-		GFF4628	0.74	-0.6
4,626,146	-		GFF4628	0.74	+1.1
4,626,147	-		GFF4628	0.74	-0.1
4,626,179	+		GFF4628	0.76	-0.5
4,626,181	-		GFF4628	0.76	-1.7
4,626,182	-		GFF4628	0.76	-1.1
4,626,182	-		GFF4628	0.76	-0.4
4,626,187	+		GFF4628	0.77	-0.7
4,626,194	+		GFF4628	0.77	+0.2
4,626,195	-		GFF4628	0.77	-0.3
4,626,200	-		GFF4628	0.78	-2.5
4,626,247	+		GFF4628	0.81	-2.3
4,626,249	+		GFF4628	0.81	-0.2
4,626,249	+		GFF4628	0.81	-2.1
4,626,249	+		GFF4628	0.81	-1.1
4,626,252	-		GFF4628	0.82	+0.8
4,626,255	-		GFF4628	0.82	+0.2
4,626,274	-		GFF4628	0.83	+0.1
4,626,280	-		GFF4628	0.84	-0.6
4,626,309	-		GFF4628	0.86	-1.7
4,626,323	+		GFF4628	0.87	+0.3
4,626,331	-		GFF4628	0.87	+0.2
4,626,336	+		GFF4628	0.88	-1.5
4,626,336	-		GFF4628	0.88	-1.6
4,626,343	+		GFF4628	0.88	-0.2
4,626,343	+		GFF4628	0.88	+0.7
4,626,351	-		GFF4628	0.89	-0.8
4,626,351	-		GFF4628	0.89	+0.1
4,626,351	-		GFF4628	0.89	-0.7
4,626,397	+				-0.8
4,626,397	+				-2.1
4,626,405	-				-2.1
4,626,405	-				-0.2
4,626,424	-				-1.8
4,626,496	-				-0.9
4,626,498	+				+0.2
4,626,498	+				-0.8
4,626,524	+				-2.7
4,626,529	+				+0.2
4,626,532	-				+0.9
4,626,540	-		GFF4629	0.12	-2.4
4,626,540	-		GFF4629	0.12	-0.5
4,626,563	+		GFF4629	0.20	-0.0
4,626,563	+		GFF4629	0.20	-0.0
4,626,564	-		GFF4629	0.20	-1.2
4,626,565	+		GFF4629	0.20	-0.3
4,626,565	+		GFF4629	0.20	+1.1
4,626,565	+		GFF4629	0.20	+0.7
4,626,565	+		GFF4629	0.20	-2.1
4,626,565	+		GFF4629	0.20	-1.1
4,626,571	-		GFF4629	0.22	-1.3
4,626,571	-		GFF4629	0.22	+0.6
4,626,573	-		GFF4629	0.23	+0.4
4,626,573	-		GFF4629	0.23	-1.1
4,626,573	-		GFF4629	0.23	-0.5
4,626,573	-		GFF4629	0.23	-2.3
4,626,573	-		GFF4629	0.23	+0.4
4,626,579	+		GFF4629	0.25	-0.2
4,626,584	+		GFF4629	0.26	-0.4
4,626,613	-		GFF4629	0.36	-1.9
4,626,619	-		GFF4629	0.37	+0.4
4,626,653	+		GFF4629	0.48	-1.1
4,626,661	-		GFF4629	0.51	-0.5
4,626,661	-		GFF4629	0.51	+0.4
4,626,674	+		GFF4629	0.55	-2.4
4,626,674	+		GFF4629	0.55	+0.7
4,626,716	+		GFF4629	0.68	-0.0
4,626,724	-		GFF4629	0.71	-0.5
4,626,724	-		GFF4629	0.71	-0.8
4,626,728	+		GFF4629	0.72	-1.2
4,626,728	+		GFF4629	0.72	+0.8
4,626,728	+		GFF4629	0.72	-1.8
4,626,733	+		GFF4629	0.74	-0.7
4,626,733	+		GFF4629	0.74	-1.8
4,626,733	+		GFF4629	0.74	-0.9
4,626,736	-		GFF4629	0.75	-0.2
4,626,736	-		GFF4629	0.75	-0.6
4,626,736	-		GFF4629	0.75	-0.6
4,626,738	+		GFF4629	0.75	-1.6
4,626,741	-		GFF4629	0.76	-2.2
4,626,741	-		GFF4629	0.76	-0.8
4,626,751	-		GFF4629	0.79	+0.3
4,626,751	-		GFF4629	0.79	+0.3
4,626,790	+				-0.7
4,626,790	+				-0.2
4,626,795	+				-0.2
4,626,798	-				-2.5
4,626,798	-				-0.7
4,626,798	-				-0.7
4,626,798	-				-1.1
4,626,798	-				-1.5
4,626,798	-				-0.1
4,626,798	-				-1.1
4,626,800	+				-0.6
4,626,885	+				+0.8
4,626,903	+				+0.3
4,626,909	+				-0.8
4,626,911	-				-3.3
4,626,922	-				-1.0
4,626,946	-				+0.0
4,626,951	+				+0.4
4,626,951	+				-0.9
4,626,956	+				-0.6
4,626,962	+				-2.0
4,626,986	+		GFF4630	0.11	-0.4
4,626,992	+		GFF4630	0.12	+0.8
4,626,992	+		GFF4630	0.12	-0.3
4,627,007	-		GFF4630	0.13	-0.6
4,627,010	-		GFF4630	0.13	-1.6
4,627,015	-		GFF4630	0.13	-0.1
4,627,019	+		GFF4630	0.14	-1.8
4,627,031	+		GFF4630	0.14	-1.6
4,627,041	+		GFF4630	0.15	-0.3
4,627,044	-		GFF4630	0.15	+0.5
4,627,044	-		GFF4630	0.15	-0.3
4,627,046	+		GFF4630	0.15	+0.6
4,627,049	-		GFF4630	0.16	+0.2
4,627,049	-		GFF4630	0.16	+0.1
4,627,065	+		GFF4630	0.17	-1.4
4,627,068	+		GFF4630	0.17	-0.5
4,627,076	+		GFF4630	0.17	-1.0
4,627,077	+		GFF4630	0.17	-0.8
4,627,078	-		GFF4630	0.18	-2.2
4,627,085	-		GFF4630	0.18	-0.5
4,627,085	-		GFF4630	0.18	-1.6
4,627,085	-		GFF4630	0.18	+0.6
4,627,147	-		GFF4630	0.22	-0.8
4,627,177	+		GFF4630	0.24	-1.5
4,627,183	+		GFF4630	0.24	-1.7
4,627,190	-		GFF4630	0.25	-0.3
4,627,199	-		GFF4630	0.26	-2.0
4,627,227	+		GFF4630	0.27	+0.0
4,627,252	+		GFF4630	0.29	-0.8
4,627,252	+		GFF4630	0.29	-0.3
4,627,255	-		GFF4630	0.29	-0.2
4,627,282	+		GFF4630	0.31	-2.2
4,627,282	+		GFF4630	0.31	-0.5
4,627,295	-		GFF4630	0.32	-0.0
4,627,295	-		GFF4630	0.32	-2.4
4,627,300	+		GFF4630	0.32	+0.6
4,627,300	+		GFF4630	0.32	-1.6
4,627,300	-		GFF4630	0.32	+1.2
4,627,324	+		GFF4630	0.34	-0.0
4,627,340	+		GFF4630	0.35	+0.1
4,627,340	+		GFF4630	0.35	-1.1
4,627,342	-		GFF4630	0.35	-0.2
4,627,345	+		GFF4630	0.35	-0.7
4,627,345	+		GFF4630	0.35	-0.9
4,627,345	+		GFF4630	0.35	+0.3
4,627,345	+		GFF4630	0.35	-0.2
4,627,353	-		GFF4630	0.36	-0.1
4,627,353	-		GFF4630	0.36	-0.5
4,627,365	-		GFF4630	0.37	+0.8
4,627,365	-		GFF4630	0.37	-0.5
4,627,372	-		GFF4630	0.37	+0.5
4,627,382	+		GFF4630	0.38	-1.7
4,627,384	+		GFF4630	0.38	+0.6
4,627,384	+		GFF4630	0.38	+1.0
4,627,389	+		GFF4630	0.38	-2.4
4,627,395	+		GFF4630	0.38	-0.5
4,627,397	-		GFF4630	0.39	-1.5
4,627,397	-		GFF4630	0.39	+0.1
4,627,403	-		GFF4630	0.39	-0.9
4,627,403	-		GFF4630	0.39	+0.1
4,627,421	+		GFF4630	0.40	+0.0
4,627,430	+		GFF4630	0.41	-2.8
4,627,449	-		GFF4630	0.42	-1.5
4,627,449	-		GFF4630	0.42	-1.2
4,627,450	-		GFF4630	0.42	+0.5
4,627,469	-		GFF4630	0.43	-0.4
4,627,471	+		GFF4630	0.43	-0.6
4,627,474	-		GFF4630	0.44	-0.9
4,627,479	-		GFF4630	0.44	+0.3
4,627,484	+		GFF4630	0.44	-0.9
4,627,484	+		GFF4630	0.44	+0.2
4,627,503	+		GFF4630	0.46	+0.6
4,627,511	-		GFF4630	0.46	+1.3
4,627,511	-		GFF4630	0.46	+0.9
4,627,593	+		GFF4630	0.52	-0.3
4,627,601	-		GFF4630	0.52	+0.3
4,627,638	+		GFF4630	0.55	-2.1
4,627,654	-		GFF4630	0.56	+0.2
4,627,656	-		GFF4630	0.56	-0.4
4,627,662	-		GFF4630	0.56	-1.8
4,627,666	+		GFF4630	0.56	-0.4
4,627,666	+		GFF4630	0.56	-1.5
4,627,666	+		GFF4630	0.56	-0.9
4,627,671	+		GFF4630	0.57	-0.8
4,627,674	-		GFF4630	0.57	-0.5
4,627,674	-		GFF4630	0.57	-0.9
4,627,674	-		GFF4630	0.57	-0.8
4,627,674	-		GFF4630	0.57	-0.1
4,627,689	+		GFF4630	0.58	-1.7
4,627,706	+		GFF4630	0.59	-0.1
4,627,707	-		GFF4630	0.59	-0.9
4,627,712	-		GFF4630	0.59	-1.0
4,627,712	-		GFF4630	0.59	-2.0
4,627,724	+		GFF4630	0.60	-0.3
4,627,725	-		GFF4630	0.60	+0.5
4,627,735	+		GFF4630	0.61	-2.7
4,627,735	+		GFF4630	0.61	+0.2
4,627,735	+		GFF4630	0.61	-0.5
4,627,751	-		GFF4630	0.62	-1.2
4,627,773	-		GFF4630	0.63	-0.3
4,627,773	-		GFF4630	0.63	-0.7
4,627,773	-		GFF4630	0.63	-1.3
4,627,779	+		GFF4630	0.64	+0.2
4,627,787	-		GFF4630	0.64	-0.5
4,627,787	-		GFF4630	0.64	-1.7
4,627,787	-		GFF4630	0.64	-2.3
4,627,787	-		GFF4630	0.64	-1.0
4,627,794	+		GFF4630	0.65	-1.2
4,627,794	+		GFF4630	0.65	-0.5
4,627,802	-		GFF4630	0.65	+0.6
4,627,812	+		GFF4630	0.66	-0.0
4,627,812	+		GFF4630	0.66	+0.9
4,627,812	+		GFF4630	0.66	+0.4
4,627,812	+		GFF4630	0.66	-1.0
4,627,812	+		GFF4630	0.66	-0.0