Strain Fitness in Sphingobium sp. HT1-2 around GFF4623

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,617,358	+		GFF4622	0.46	-1.1
4,617,358	+		GFF4622	0.46	-0.5
4,617,366	-		GFF4622	0.46	+0.6
4,617,378	-		GFF4622	0.47	-0.5
4,617,379	+		GFF4622	0.47	+0.1
4,617,380	+		GFF4622	0.47	-1.5
4,617,380	+		GFF4622	0.47	-0.4
4,617,380	+		GFF4622	0.47	-0.0
4,617,380	+		GFF4622	0.47	-1.3
4,617,386	+		GFF4622	0.47	-2.0
4,617,388	-		GFF4622	0.47	+0.8
4,617,388	-		GFF4622	0.47	+0.0
4,617,388	-		GFF4622	0.47	-0.0
4,617,394	-		GFF4622	0.48	+0.9
4,617,394	-		GFF4622	0.48	+0.1
4,617,413	+		GFF4622	0.49	-1.0
4,617,421	-		GFF4622	0.50	-0.8
4,617,421	-		GFF4622	0.50	-0.0
4,617,427	-		GFF4622	0.50	-1.6
4,617,430	+		GFF4622	0.50	-0.0
4,617,444	-		GFF4622	0.51	+0.7
4,617,453	+		GFF4622	0.52	-1.2
4,617,467	-		GFF4622	0.52	+0.1
4,617,498	-		GFF4622	0.54	-1.2
4,617,533	+		GFF4622	0.56	-1.9
4,617,542	-		GFF4622	0.57	-1.1
4,617,548	+		GFF4622	0.57	-0.4
4,617,554	-		GFF4622	0.58	-0.1
4,617,554	-		GFF4622	0.58	+0.1
4,617,554	-		GFF4622	0.58	+0.1
4,617,554	-		GFF4622	0.58	-0.0
4,617,561	-		GFF4622	0.58	-0.7
4,617,582	+		GFF4622	0.59	-0.0
4,617,582	+		GFF4622	0.59	+0.5
4,617,582	+		GFF4622	0.59	+0.3
4,617,582	+		GFF4622	0.59	-0.3
4,617,582	+		GFF4622	0.59	-0.7
4,617,582	+		GFF4622	0.59	-0.0
4,617,590	-		GFF4622	0.60	-2.0
4,617,590	-		GFF4622	0.60	-2.2
4,617,599	+		GFF4622	0.61	-1.8
4,617,612	+		GFF4622	0.61	-0.6
4,617,618	+		GFF4622	0.62	-1.1
4,617,635	+		GFF4622	0.63	+0.3
4,617,639	+		GFF4622	0.63	-0.5
4,617,643	-		GFF4622	0.63	-0.3
4,617,643	-		GFF4622	0.63	-0.6
4,617,649	+		GFF4622	0.64	-0.3
4,617,657	-		GFF4622	0.64	-0.6
4,617,657	-		GFF4622	0.64	+0.4
4,617,657	-		GFF4622	0.64	+1.3
4,617,659	+		GFF4622	0.64	+0.6
4,617,659	+		GFF4622	0.64	-1.1
4,617,662	-		GFF4622	0.64	+0.8
4,617,666	+		GFF4622	0.65	+0.0
4,617,667	-		GFF4622	0.65	-0.1
4,617,667	-		GFF4622	0.65	-2.1
4,617,681	+		GFF4622	0.66	-0.3
4,617,695	+		GFF4622	0.66	+0.1
4,617,716	+		GFF4622	0.68	+0.4
4,617,716	+		GFF4622	0.68	+0.4
4,617,723	-		GFF4622	0.68	-0.5
4,617,737	-		GFF4622	0.69	-0.6
4,617,760	+		GFF4622	0.71	+0.3
4,617,760	+		GFF4622	0.71	-0.0
4,617,760	+		GFF4622	0.71	-1.1
4,617,760	+		GFF4622	0.71	-0.7
4,617,760	+		GFF4622	0.71	+0.2
4,617,760	+		GFF4622	0.71	-1.2
4,617,761	+		GFF4622	0.71	-1.6
4,617,761	+		GFF4622	0.71	-0.0
4,617,761	-		GFF4622	0.71	+0.1
4,617,761	-		GFF4622	0.71	-0.2
4,617,775	+		GFF4622	0.71	-1.7
4,617,794	+		GFF4622	0.73	-0.7
4,617,809	-		GFF4622	0.74	-0.8
4,617,815	+		GFF4622	0.74	+0.1
4,617,816	+		GFF4622	0.74	-0.1
4,617,816	-		GFF4622	0.74	-0.1
4,617,822	+		GFF4622	0.74	+0.3
4,617,823	-		GFF4622	0.74	-1.3
4,617,827	+		GFF4622	0.75	-0.7
4,617,828	-		GFF4622	0.75	-1.4
4,617,830	-		GFF4622	0.75	-1.3
4,617,861	+		GFF4622	0.77	-2.7
4,617,862	+		GFF4622	0.77	-0.2
4,617,864	+		GFF4622	0.77	-0.2
4,617,865	-		GFF4622	0.77	-0.0
4,617,866	+		GFF4622	0.77	-0.6
4,617,869	-		GFF4622	0.77	+1.1
4,617,874	-		GFF4622	0.78	+0.8
4,617,874	-		GFF4622	0.78	-1.1
4,617,874	-		GFF4622	0.78	-0.7
4,617,886	+		GFF4622	0.78	-0.9
4,617,889	-		GFF4622	0.78	-0.4
4,617,891	-		GFF4622	0.79	-0.6
4,617,894	+		GFF4622	0.79	+0.4
4,617,894	+		GFF4622	0.79	-0.9
4,617,894	+		GFF4622	0.79	-0.9
4,617,902	-		GFF4622	0.79	+0.2
4,617,902	-		GFF4622	0.79	+0.1
4,617,908	+		GFF4622	0.80	-0.4
4,617,908	+		GFF4622	0.80	-0.3
4,617,908	+		GFF4622	0.80	-1.6
4,617,908	+		GFF4622	0.80	-1.4
4,617,908	+		GFF4622	0.80	+0.1
4,617,908	+		GFF4622	0.80	-0.4
4,617,908	+		GFF4622	0.80	-0.8
4,617,908	+		GFF4622	0.80	-0.7
4,617,908	+		GFF4622	0.80	-1.3
4,617,908	+		GFF4622	0.80	-1.8
4,617,908	+		GFF4622	0.80	-0.2
4,617,908	+		GFF4622	0.80	-0.9
4,617,908	+		GFF4622	0.80	+0.4
4,617,908	+		GFF4622	0.80	+0.6
4,617,908	+		GFF4622	0.80	+0.6
4,617,908	+		GFF4622	0.80	-1.2
4,617,908	+		GFF4622	0.80	-0.7
4,617,908	+		GFF4622	0.80	-1.1
4,617,916	-		GFF4622	0.80	-0.0
4,617,916	-		GFF4622	0.80	-0.8
4,617,916	-		GFF4622	0.80	-0.6
4,617,916	-		GFF4622	0.80	-0.9
4,617,916	-		GFF4622	0.80	-0.3
4,617,916	-		GFF4622	0.80	+0.7
4,617,916	-		GFF4622	0.80	-1.0
4,617,916	-		GFF4622	0.80	-0.5
4,617,916	-		GFF4622	0.80	-1.2
4,617,916	-		GFF4622	0.80	+0.4
4,617,916	-		GFF4622	0.80	-0.2
4,617,916	-		GFF4622	0.80	-3.1
4,617,916	-		GFF4622	0.80	-0.1
4,617,916	-		GFF4622	0.80	-2.1
4,617,916	-		GFF4622	0.80	+0.6
4,617,916	-		GFF4622	0.80	+0.5
4,617,916	-		GFF4622	0.80	-0.2
4,617,916	-		GFF4622	0.80	+0.2
4,617,916	-		GFF4622	0.80	+0.8
4,617,916	-		GFF4622	0.80	-0.1
4,617,916	-		GFF4622	0.80	-1.0
4,617,916	-		GFF4622	0.80	-0.4
4,617,926	-		GFF4622	0.81	-0.7
4,617,926	-		GFF4622	0.81	+1.1
4,618,004	-		GFF4622	0.86	-0.6
4,618,048	+		GFF4622	0.88	-1.6
4,618,051	+		GFF4622	0.88	+0.8
4,618,105	-				-1.0
4,618,105	-				+0.7
4,618,112	+				-0.1
4,618,120	-				-0.4
4,618,134	+				-0.5
4,618,178	-				-1.9
4,618,180	-				-1.1
4,618,192	+				+0.1
4,618,196	+				-0.4
4,618,201	+				-0.0
4,618,204	-				+0.3
4,618,215	+				-0.0
4,618,223	-				-0.3
4,618,223	-				+1.0
4,618,225	+				-1.7
4,618,225	+				+0.4
4,618,225	+				+0.8
4,618,233	-				+0.1
4,618,251	+				-0.6
4,618,251	+				-0.9
4,618,251	-				-2.9
4,618,252	+				-0.6
4,618,259	-				-1.6
4,618,260	-				+1.1
4,618,285	+				-1.0
4,618,285	+				-0.2
4,618,285	+				+0.5
4,618,285	+				+1.0
4,618,286	+				-0.6
4,618,288	-				+0.7
4,618,293	-				-1.4
4,618,307	+				-0.7
4,618,334	+				-0.0
4,618,335	+				-0.2
4,618,352	-		GFF4623	0.12	-0.2
4,618,390	+		GFF4623	0.43	+1.2
4,618,390	+		GFF4623	0.43	-1.6
4,618,390	+		GFF4623	0.43	+0.5
4,618,398	-		GFF4623	0.50	-0.6
4,618,421	+		GFF4623	0.69	+0.0
4,618,430	+		GFF4623	0.77	-0.2
4,618,434	-		GFF4623	0.80	-0.4
4,618,459	+				+0.3
4,618,462	+				-1.2
4,618,467	-				+0.6
4,618,467	-				-0.9
4,618,467	-				-0.3
4,618,525	+				+0.5
4,618,530	+				-0.9
4,618,533	-				-0.1
4,618,533	-				+0.8
4,618,538	-				+1.3
4,618,538	-				-0.3
4,618,549	+				-0.9
4,618,556	+				-0.1
4,618,558	+				-0.1
4,618,563	+				-1.9
4,618,578	+				+0.8
4,618,584	-				-0.9
4,618,586	-				-0.4
4,618,600	+				-2.3
4,618,616	+				-0.6
4,618,621	+				-0.5
4,618,621	+				-0.9
4,618,621	+				-1.0
4,618,624	+				-1.0
4,618,624	+				-0.5
4,618,624	+				+0.4
4,618,624	+				+0.5
4,618,624	+				+0.8
4,618,624	+				+1.0
4,618,624	+				-1.6
4,618,624	+				-0.5
4,618,624	-				+0.4
4,618,627	-				-0.6
4,618,629	-				-0.5
4,618,629	-				-2.9
4,618,632	-				-1.3
4,618,632	-				-0.6
4,618,632	-				+1.3
4,618,632	-				-1.9
4,618,632	-				-0.6
4,618,638	-				-1.2
4,618,644	+				-1.7
4,618,665	+				-0.2
4,618,671	-				-0.8
4,618,671	-				-0.2
4,618,681	-		GFF4624	0.10	-0.5
4,618,683	+		GFF4624	0.11	-1.4
4,618,686	-		GFF4624	0.11	-0.6
4,618,705	-		GFF4624	0.12	+0.9
4,618,705	-		GFF4624	0.12	+0.3
4,618,712	+		GFF4624	0.13	-0.3
4,618,720	-		GFF4624	0.13	-0.7
4,618,745	+		GFF4624	0.15	-1.6
4,618,764	+		GFF4624	0.16	-0.8
4,618,767	-		GFF4624	0.17	-3.0
4,618,769	+		GFF4624	0.17	-1.2
4,618,769	+		GFF4624	0.17	-3.4
4,618,787	-		GFF4624	0.18	-0.7
4,618,787	-		GFF4624	0.18	-0.5
4,618,787	-		GFF4624	0.18	-1.0
4,618,787	-		GFF4624	0.18	-0.2
4,618,788	+		GFF4624	0.18	-2.0
4,618,795	-		GFF4624	0.19	+0.2
4,618,823	-		GFF4624	0.21	+0.4
4,618,828	+		GFF4624	0.21	+1.2
4,618,828	+		GFF4624	0.21	+0.5
4,618,828	+		GFF4624	0.21	+0.7
4,618,828	+		GFF4624	0.21	-0.5
4,618,848	-		GFF4624	0.23	-2.2
4,618,857	+		GFF4624	0.23	+0.2
4,618,895	-		GFF4624	0.26	-0.4
4,618,933	+		GFF4624	0.29	-2.1
4,618,950	-		GFF4624	0.30	-0.5
4,618,951	-		GFF4624	0.30	-0.6
4,618,952	+		GFF4624	0.30	-1.0
4,618,953	+		GFF4624	0.30	-1.0
4,618,960	-		GFF4624	0.31	+0.5
4,618,960	-		GFF4624	0.31	-0.4
4,618,960	-		GFF4624	0.31	-2.3
4,618,960	-		GFF4624	0.31	-1.9
4,618,960	-		GFF4624	0.31	+0.4
4,618,962	+		GFF4624	0.31	-0.8
4,618,988	-		GFF4624	0.33	-1.8
4,619,046	-		GFF4624	0.37	-0.1
4,619,084	-		GFF4624	0.40	-1.6
4,619,084	-		GFF4624	0.40	-0.4
4,619,087	+		GFF4624	0.40	-1.5
4,619,087	+		GFF4624	0.40	-0.8
4,619,087	+		GFF4624	0.40	-0.6
4,619,087	+		GFF4624	0.40	-0.2
4,619,087	+		GFF4624	0.40	-0.3
4,619,087	+		GFF4624	0.40	+0.1
4,619,095	-		GFF4624	0.41	+0.8
4,619,097	-		GFF4624	0.41	-0.9
4,619,097	-		GFF4624	0.41	+1.0
4,619,097	-		GFF4624	0.41	-1.0
4,619,104	+		GFF4624	0.41	-1.6
4,619,104	+		GFF4624	0.41	-0.2
4,619,112	-		GFF4624	0.42	+1.5
4,619,112	-		GFF4624	0.42	-1.7
4,619,119	+		GFF4624	0.42	-0.7
4,619,161	+		GFF4624	0.45	-0.5
4,619,161	+		GFF4624	0.45	-0.6
4,619,178	+		GFF4624	0.47	+0.3
4,619,184	-		GFF4624	0.47	-0.0
4,619,186	+		GFF4624	0.47	-2.7
4,619,186	+		GFF4624	0.47	-0.0
4,619,194	-		GFF4624	0.48	-1.4
4,619,197	+		GFF4624	0.48	+0.7
4,619,202	+		GFF4624	0.48	+0.3
4,619,202	+		GFF4624	0.48	+0.2
4,619,210	-		GFF4624	0.49	-0.8
4,619,210	-		GFF4624	0.49	+0.3
4,619,210	-		GFF4624	0.49	-0.5
4,619,210	-		GFF4624	0.49	-0.7
4,619,210	-		GFF4624	0.49	-0.8
4,619,221	-		GFF4624	0.50	-2.6
4,619,247	-		GFF4624	0.52	-0.8
4,619,249	+		GFF4624	0.52	-0.4
4,619,259	+		GFF4624	0.53	+0.1
4,619,270	+		GFF4624	0.53	-0.7
4,619,275	+		GFF4624	0.54	+1.0
4,619,289	+		GFF4624	0.55	-1.1
4,619,294	+		GFF4624	0.55	-1.6
4,619,294	+		GFF4624	0.55	+0.0
4,619,294	+		GFF4624	0.55	+0.1
4,619,321	+		GFF4624	0.57	+1.2
4,619,321	+		GFF4624	0.57	+0.1
4,619,321	+		GFF4624	0.57	-1.8
4,619,321	+		GFF4624	0.57	-1.0
4,619,321	+		GFF4624	0.57	-1.7
4,619,329	-		GFF4624	0.58	+0.7
4,619,329	-		GFF4624	0.58	-2.3
4,619,339	-		GFF4624	0.58	-1.1
4,619,381	-		GFF4624	0.61	-0.6
4,619,423	+		GFF4624	0.64	+0.4
4,619,423	+		GFF4624	0.64	+0.3
4,619,423	+		GFF4624	0.64	-1.0
4,619,423	+		GFF4624	0.64	-0.9
4,619,423	+		GFF4624	0.64	+1.1
4,619,423	+		GFF4624	0.64	+0.3
4,619,423	+		GFF4624	0.64	-3.0
4,619,423	+		GFF4624	0.64	-1.2
4,619,431	-		GFF4624	0.65	-0.0
4,619,431	-		GFF4624	0.65	-2.8
4,619,431	-		GFF4624	0.65	-2.3
4,619,431	-		GFF4624	0.65	-0.2
4,619,431	-		GFF4624	0.65	-0.7
4,619,431	-		GFF4624	0.65	-0.4
4,619,431	-		GFF4624	0.65	-0.1
4,619,431	-		GFF4624	0.65	+1.0
4,619,431	-		GFF4624	0.65	-0.1
4,619,431	-		GFF4624	0.65	+0.1
4,619,431	-		GFF4624	0.65	-0.6
4,619,433	+		GFF4624	0.65	-0.5
4,619,435	-		GFF4624	0.65	+0.5
4,619,435	-		GFF4624	0.65	-0.9
4,619,435	-		GFF4624	0.65	-0.8
4,619,440	-		GFF4624	0.66	-2.4
4,619,447	-		GFF4624	0.66	+0.2