Strain Fitness in Sphingobium sp. HT1-2 around GFF4543

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,534,752	-				+0.0
4,534,765	-				-0.8
4,534,826	+				+1.2
4,534,834	-				-0.2
4,534,838	-				-2.6
4,534,844	+				-0.7
4,534,857	-				+0.0
4,534,860	+				-1.8
4,534,874	+				-1.5
4,534,881	+				+0.7
4,534,881	+				-0.5
4,534,881	+				-0.9
4,534,881	+				-0.4
4,534,881	+				-1.7
4,534,884	-				-0.2
4,534,884	-				-0.7
4,534,886	+				-1.2
4,534,889	-				-0.3
4,534,889	-				+0.2
4,534,889	-				-0.5
4,534,889	-				+1.0
4,534,889	-				-0.9
4,534,891	+				+0.2
4,534,899	-				-0.1
4,534,899	-				+1.3
4,534,913	+				-1.8
4,534,913	+				-1.0
4,534,913	+				+1.2
4,534,913	+				-1.3
4,534,918	+				-0.2
4,534,918	+				-0.3
4,534,918	+				-2.2
4,534,921	-				+0.3
4,534,926	-				-1.9
4,534,926	-				-0.7
4,534,926	-				-0.3
4,534,926	-				-1.8
4,534,931	-				+0.1
4,534,935	-				-1.4
4,534,980	+				-1.7
4,534,980	+				-2.1
4,534,980	+				-0.7
4,534,988	+				+0.6
4,534,996	-				-2.4
4,534,996	-				-1.8
4,534,996	-				-0.7
4,534,996	-				-0.7
4,535,025	+				-1.8
4,535,025	+				-0.5
4,535,025	+				-0.5
4,535,025	+				-1.1
4,535,025	+				-2.1
4,535,025	+				+0.1
4,535,025	+				-1.3
4,535,025	+				-1.5
4,535,025	+				-2.0
4,535,030	+				+0.8
4,535,030	+				+0.3
4,535,030	+				+1.1
4,535,030	+				-0.5
4,535,030	+				-0.8
4,535,030	+				+0.2
4,535,030	+				-0.2
4,535,030	+				-0.4
4,535,030	+				-0.5
4,535,030	+				-1.2
4,535,030	+				-0.7
4,535,030	+				-1.9
4,535,030	+				-0.2
4,535,030	+				-0.2
4,535,030	+				-3.2
4,535,032	+				+1.1
4,535,032	+				+0.4
4,535,032	+				+0.3
4,535,032	+				-2.2
4,535,033	-				-0.8
4,535,033	-				-1.2
4,535,033	-				-1.3
4,535,033	-				-0.9
4,535,033	-				-0.5
4,535,033	-				-1.2
4,535,033	-				+0.2
4,535,037	+				-0.3
4,535,038	-				-1.9
4,535,038	-				-1.3
4,535,038	-				+0.0
4,535,038	-				-1.5
4,535,038	-				-0.9
4,535,038	-				-0.7
4,535,038	-				-0.5
4,535,038	-				+0.9
4,535,038	-				-0.2
4,535,038	-				-1.1
4,535,038	-				+0.0
4,535,038	-				-0.6
4,535,039	-				-0.1
4,535,045	-				-0.6
4,535,045	-				-0.9
4,535,045	-				-0.5
4,535,045	-				+1.2
4,535,049	+				-1.1
4,535,058	-				-0.4
4,535,058	-				+0.4
4,535,063	-				-1.8
4,535,076	+				+0.0
4,535,076	-				-0.8
4,535,076	-				-1.0
4,535,079	-				+1.9
4,535,084	-				+0.7
4,535,097	-		GFF4543	0.10	-0.8
4,535,111	+		GFF4543	0.11	-0.7
4,535,113	-		GFF4543	0.11	-1.4
4,535,113	-		GFF4543	0.11	+0.0
4,535,123	-		GFF4543	0.11	-0.9
4,535,141	+		GFF4543	0.12	-0.4
4,535,151	+		GFF4543	0.12	+0.2
4,535,151	+		GFF4543	0.12	-1.1
4,535,151	+		GFF4543	0.12	-2.3
4,535,151	+		GFF4543	0.12	-0.8
4,535,151	+		GFF4543	0.12	-0.2
4,535,159	-		GFF4543	0.13	-0.1
4,535,159	-		GFF4543	0.13	-1.2
4,535,159	-		GFF4543	0.13	+1.7
4,535,159	-		GFF4543	0.13	-0.1
4,535,159	-		GFF4543	0.13	-0.3
4,535,159	-		GFF4543	0.13	-0.2
4,535,159	-		GFF4543	0.13	+0.7
4,535,159	-		GFF4543	0.13	-0.0
4,535,159	-		GFF4543	0.13	-1.0
4,535,159	-		GFF4543	0.13	-1.1
4,535,174	-		GFF4543	0.13	-0.2
4,535,176	+		GFF4543	0.13	-1.6
4,535,199	+		GFF4543	0.14	+0.4
4,535,199	+		GFF4543	0.14	-1.5
4,535,199	+		GFF4543	0.14	-0.2
4,535,202	-		GFF4543	0.14	-0.3
4,535,207	-		GFF4543	0.14	-2.2
4,535,207	-		GFF4543	0.14	+0.6
4,535,207	-		GFF4543	0.14	+1.0
4,535,220	-		GFF4543	0.15	-0.2
4,535,222	+		GFF4543	0.15	+0.3
4,535,222	+		GFF4543	0.15	-0.4
4,535,222	+		GFF4543	0.15	-0.3
4,535,222	+		GFF4543	0.15	-0.5
4,535,222	+		GFF4543	0.15	+0.0
4,535,224	+		GFF4543	0.15	-0.8
4,535,230	-		GFF4543	0.15	-0.6
4,535,230	-		GFF4543	0.15	-1.2
4,535,230	-		GFF4543	0.15	+0.2
4,535,230	-		GFF4543	0.15	-0.3
4,535,244	-		GFF4543	0.16	+0.2
4,535,282	+		GFF4543	0.18	+1.1
4,535,282	+		GFF4543	0.18	-1.1
4,535,290	-		GFF4543	0.18	-0.3
4,535,364	+		GFF4543	0.21	-0.1
4,535,396	-		GFF4543	0.22	-2.1
4,535,422	+		GFF4543	0.23	+0.2
4,535,427	+		GFF4543	0.23	-1.4
4,535,427	+		GFF4543	0.23	-2.1
4,535,451	+		GFF4543	0.24	-3.0
4,535,451	+		GFF4543	0.24	-0.5
4,535,451	+		GFF4543	0.24	-1.7
4,535,451	+		GFF4543	0.24	-0.5
4,535,459	-		GFF4543	0.25	-0.4
4,535,459	-		GFF4543	0.25	+0.8
4,535,461	+		GFF4543	0.25	-0.5
4,535,461	+		GFF4543	0.25	-1.6
4,535,461	+		GFF4543	0.25	-0.9
4,535,461	+		GFF4543	0.25	+0.2
4,535,461	+		GFF4543	0.25	+0.5
4,535,469	-		GFF4543	0.25	-0.6
4,535,469	-		GFF4543	0.25	-0.4
4,535,469	-		GFF4543	0.25	-3.0
4,535,469	-		GFF4543	0.25	+0.4
4,535,478	+		GFF4543	0.25	-0.7
4,535,484	-		GFF4543	0.26	+0.2
4,535,486	-		GFF4543	0.26	-0.5
4,535,497	+		GFF4543	0.26	-1.0
4,535,517	-		GFF4543	0.27	-1.1
4,535,517	-		GFF4543	0.27	+0.7
4,535,518	+		GFF4543	0.27	+1.0
4,535,525	+		GFF4543	0.27	-0.4
4,535,525	+		GFF4543	0.27	+0.4
4,535,525	-		GFF4543	0.27	-2.9
4,535,526	+		GFF4543	0.27	-0.9
4,535,526	+		GFF4543	0.27	-2.5
4,535,526	-		GFF4543	0.27	+2.0
4,535,533	-		GFF4543	0.28	-1.5
4,535,533	-		GFF4543	0.28	-2.1
4,535,534	-		GFF4543	0.28	-1.2
4,535,602	+		GFF4543	0.31	-0.6
4,535,609	+		GFF4543	0.31	-0.4
4,535,627	+		GFF4543	0.32	-1.0
4,535,632	+		GFF4543	0.32	-1.6
4,535,633	-		GFF4543	0.32	-0.7
4,535,668	-		GFF4543	0.33	+0.1
4,535,669	+		GFF4543	0.33	+0.9
4,535,676	-		GFF4543	0.34	-2.9
4,535,687	+		GFF4543	0.34	+0.3
4,535,687	+		GFF4543	0.34	+0.8
4,535,687	+		GFF4543	0.34	-0.3
4,535,692	+		GFF4543	0.34	+0.3
4,535,695	-		GFF4543	0.34	+0.3
4,535,695	-		GFF4543	0.34	-1.4
4,535,697	+		GFF4543	0.34	-1.9
4,535,700	-		GFF4543	0.35	-0.2
4,535,700	-		GFF4543	0.35	-3.2
4,535,700	-		GFF4543	0.35	+0.3
4,535,705	-		GFF4543	0.35	-1.3
4,535,705	-		GFF4543	0.35	-0.9
4,535,713	-		GFF4543	0.35	-1.0
4,535,729	+		GFF4543	0.36	-1.7
4,535,736	-		GFF4543	0.36	+0.5
4,535,736	-		GFF4543	0.36	-1.9
4,535,743	-		GFF4543	0.36	-0.3
4,535,743	-		GFF4543	0.36	+0.0
4,535,748	+		GFF4543	0.36	-0.8
4,535,748	+		GFF4543	0.36	-1.1
4,535,748	+		GFF4543	0.36	-0.1
4,535,770	+		GFF4543	0.37	-1.0
4,535,770	+		GFF4543	0.37	+0.4
4,535,770	+		GFF4543	0.37	-0.2
4,535,770	+		GFF4543	0.37	+0.1
4,535,770	+		GFF4543	0.37	+1.0
4,535,770	+		GFF4543	0.37	-0.1
4,535,770	+		GFF4543	0.37	-0.7
4,535,778	-		GFF4543	0.38	+0.2
4,535,778	-		GFF4543	0.38	-0.2
4,535,783	-		GFF4543	0.38	+0.5
4,535,786	+		GFF4543	0.38	-0.2
4,535,786	+		GFF4543	0.38	-0.2
4,535,786	+		GFF4543	0.38	-1.4
4,535,786	+		GFF4543	0.38	-0.9
4,535,786	+		GFF4543	0.38	-0.3
4,535,786	+		GFF4543	0.38	-1.8
4,535,791	+		GFF4543	0.38	+0.7
4,535,794	+		GFF4543	0.38	-0.4
4,535,794	-		GFF4543	0.38	+0.9
4,535,796	+		GFF4543	0.38	-0.7
4,535,799	+		GFF4543	0.39	-0.9
4,535,799	+		GFF4543	0.39	+1.2
4,535,799	+		GFF4543	0.39	+0.2
4,535,799	+		GFF4543	0.39	+0.2
4,535,802	-		GFF4543	0.39	-0.9
4,535,807	-		GFF4543	0.39	-2.2
4,535,809	+		GFF4543	0.39	+0.5
4,535,809	-		GFF4543	0.39	-1.1
4,535,812	+		GFF4543	0.39	-0.8
4,535,820	-		GFF4543	0.39	-0.7
4,535,821	+		GFF4543	0.39	-1.0
4,535,821	+		GFF4543	0.39	-0.6
4,535,821	+		GFF4543	0.39	-0.5
4,535,821	+		GFF4543	0.39	-0.7
4,535,824	-		GFF4543	0.40	-0.9
4,535,829	-		GFF4543	0.40	-2.1
4,535,829	-		GFF4543	0.40	+0.3
4,535,829	-		GFF4543	0.40	+0.4
4,535,842	+		GFF4543	0.40	+0.2
4,535,853	+		GFF4543	0.41	-0.2
4,535,854	+		GFF4543	0.41	-0.7
4,535,854	+		GFF4543	0.41	-0.8
4,535,854	+		GFF4543	0.41	+0.0
4,535,862	-		GFF4543	0.41	-0.8
4,535,862	-		GFF4543	0.41	+0.4
4,535,862	-		GFF4543	0.41	+0.2
4,535,864	+		GFF4543	0.41	-0.4
4,535,864	+		GFF4543	0.41	+0.4
4,535,872	-		GFF4543	0.42	-0.2
4,535,874	-		GFF4543	0.42	-2.3
4,535,879	-		GFF4543	0.42	-1.4
4,535,881	+		GFF4543	0.42	-2.6
4,535,885	+		GFF4543	0.42	-0.3
4,535,889	-		GFF4543	0.42	-1.5
4,535,893	-		GFF4543	0.42	-0.6
4,535,910	+		GFF4543	0.43	+0.3
4,535,915	+		GFF4543	0.43	+1.1
4,535,916	-		GFF4543	0.43	-0.9
4,535,918	-		GFF4543	0.43	-1.6
4,535,925	+		GFF4543	0.44	-0.9
4,535,935	+		GFF4543	0.44	+0.5
4,535,943	+		GFF4543	0.44	-0.6
4,535,943	-		GFF4543	0.44	-0.3
4,535,944	+		GFF4543	0.44	-0.2
4,535,944	+		GFF4543	0.44	-1.4
4,535,944	+		GFF4543	0.44	+0.5
4,535,951	+		GFF4543	0.45	+0.2
4,535,951	-		GFF4543	0.45	-0.3
4,535,951	-		GFF4543	0.45	+0.3
4,535,959	-		GFF4543	0.45	-2.0
4,535,959	-		GFF4543	0.45	-2.1
4,535,959	-		GFF4543	0.45	+0.2
4,535,961	-		GFF4543	0.45	-0.6
4,535,961	-		GFF4543	0.45	-0.1
4,535,975	+		GFF4543	0.46	-0.1
4,535,975	+		GFF4543	0.46	-0.3
4,535,983	+		GFF4543	0.46	+0.2
4,535,983	-		GFF4543	0.46	-0.2
4,535,983	-		GFF4543	0.46	-1.5
4,535,983	-		GFF4543	0.46	+0.2
4,535,983	-		GFF4543	0.46	+0.1
4,535,983	-		GFF4543	0.46	-0.4
4,535,989	+		GFF4543	0.46	-2.5
4,535,989	+		GFF4543	0.46	-0.6
4,535,989	+		GFF4543	0.46	-0.1
4,535,989	+		GFF4543	0.46	-0.9
4,535,989	+		GFF4543	0.46	+0.5
4,535,989	+		GFF4543	0.46	-0.9
4,535,989	+		GFF4543	0.46	-0.1
4,535,989	+		GFF4543	0.46	-1.4
4,535,997	-		GFF4543	0.47	-0.2
4,535,997	-		GFF4543	0.47	-2.1
4,535,997	-		GFF4543	0.47	-0.1
4,535,997	-		GFF4543	0.47	-1.2
4,535,997	-		GFF4543	0.47	-0.4
4,535,997	-		GFF4543	0.47	-0.6
4,535,997	-		GFF4543	0.47	-0.7
4,535,997	-		GFF4543	0.47	-0.4
4,535,997	-		GFF4543	0.47	-0.1
4,536,002	-		GFF4543	0.47	-0.1
4,536,024	+		GFF4543	0.48	-2.5
4,536,042	-		GFF4543	0.48	+0.5
4,536,048	-		GFF4543	0.49	+1.5
4,536,049	+		GFF4543	0.49	-0.7
4,536,067	-		GFF4543	0.49	-0.8
4,536,071	+		GFF4543	0.50	+1.3
4,536,071	+		GFF4543	0.50	-2.0
4,536,076	+		GFF4543	0.50	+0.1
4,536,076	+		GFF4543	0.50	-0.6
4,536,076	+		GFF4543	0.50	-2.2
4,536,079	-		GFF4543	0.50	+0.1
4,536,081	+		GFF4543	0.50	-1.9
4,536,081	+		GFF4543	0.50	+0.8
4,536,081	+		GFF4543	0.50	-0.9
4,536,081	+		GFF4543	0.50	+1.1
4,536,085	-		GFF4543	0.50	+0.3
4,536,089	-		GFF4543	0.50	-1.6
4,536,100	-		GFF4543	0.51	-0.5
4,536,102	+		GFF4543	0.51	-2.0
4,536,102	-		GFF4543	0.51	-0.6
4,536,104	+		GFF4543	0.51	+0.1
4,536,104	+		GFF4543	0.51	-0.0
4,536,104	+		GFF4543	0.51	+0.4
4,536,105	-		GFF4543	0.51	-0.6
4,536,107	+		GFF4543	0.51	-0.9
4,536,107	+		GFF4543	0.51	+0.9
4,536,107	+		GFF4543	0.51	+0.7
4,536,107	+		GFF4543	0.51	-0.1
4,536,112	+		GFF4543	0.51	-0.6
4,536,115	-		GFF4543	0.51	-0.5
4,536,115	-		GFF4543	0.51	+0.4
4,536,115	-		GFF4543	0.51	-2.7
4,536,115	-		GFF4543	0.51	+1.0
4,536,115	-		GFF4543	0.51	-2.5
4,536,116	+		GFF4543	0.51	-0.5
4,536,122	-		GFF4543	0.52	-0.9
4,536,134	+		GFF4543	0.52	+0.1
4,536,134	+		GFF4543	0.52	+0.7
4,536,134	+		GFF4543	0.52	-0.9
4,536,139	+		GFF4543	0.52	-1.1
4,536,142	-		GFF4543	0.52	-0.4
4,536,142	-		GFF4543	0.52	-0.8
4,536,199	+		GFF4543	0.55	-2.2
4,536,204	+		GFF4543	0.55	+0.5
4,536,215	+		GFF4543	0.55	-0.5
4,536,225	-		GFF4543	0.56	+0.1
4,536,233	+		GFF4543	0.56	-1.4
4,536,289	+		GFF4543	0.58	-1.5
4,536,302	-		GFF4543	0.59	+0.5
4,536,312	+		GFF4543	0.59	-0.6
4,536,320	-		GFF4543	0.60	-0.3
4,536,342	+		GFF4543	0.61	-1.8
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4,536,453	-		GFF4543	0.65	-2.6
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4,537,094	+				-1.7
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4,537,195	+				-1.3
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4,537,370	+				+0.9
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4,537,383	-				+0.0
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