Strain Fitness in Sphingobium sp. HT1-2 around GFF4394

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,394,852	+		GFF4393	0.27	-0.7
4,394,857	+		GFF4393	0.27	+0.7
4,394,857	+		GFF4393	0.27	+0.1
4,394,857	+		GFF4393	0.27	-1.4
4,394,857	+		GFF4393	0.27	-1.0
4,394,860	-		GFF4393	0.27	+0.6
4,394,862	+		GFF4393	0.27	+0.3
4,394,865	-		GFF4393	0.28	+0.3
4,394,865	-		GFF4393	0.28	+0.7
4,394,865	-		GFF4393	0.28	-0.2
4,394,870	-		GFF4393	0.28	+0.4
4,394,870	-		GFF4393	0.28	+0.5
4,394,895	+		GFF4393	0.30	-1.5
4,394,927	-		GFF4393	0.32	+0.7
4,394,931	-		GFF4393	0.33	+1.1
4,394,952	+		GFF4393	0.34	+0.2
4,394,960	-		GFF4393	0.35	-0.1
4,394,985	+		GFF4393	0.37	+0.4
4,394,985	+		GFF4393	0.37	-0.6
4,394,985	+		GFF4393	0.37	-0.4
4,394,985	+		GFF4393	0.37	-0.8
4,394,990	+		GFF4393	0.37	-1.0
4,394,990	+		GFF4393	0.37	+0.3
4,394,998	-		GFF4393	0.37	+1.1
4,394,998	-		GFF4393	0.37	+0.5
4,395,005	-		GFF4393	0.38	-0.5
4,395,024	+		GFF4393	0.39	-0.6
4,395,047	+		GFF4393	0.41	-0.1
4,395,053	-		GFF4393	0.42	-0.7
4,395,055	-		GFF4393	0.42	-0.5
4,395,072	+		GFF4393	0.43	-0.5
4,395,072	+		GFF4393	0.43	-0.4
4,395,072	+		GFF4393	0.43	+2.7
4,395,072	+		GFF4393	0.43	+0.1
4,395,072	-		GFF4393	0.43	+0.1
4,395,077	+		GFF4393	0.43	-0.5
4,395,077	+		GFF4393	0.43	+0.5
4,395,077	+		GFF4393	0.43	-0.5
4,395,077	+		GFF4393	0.43	+1.0
4,395,077	+		GFF4393	0.43	-0.2
4,395,077	+		GFF4393	0.43	+0.4
4,395,080	-		GFF4393	0.44	-0.4
4,395,080	-		GFF4393	0.44	-0.0
4,395,080	-		GFF4393	0.44	+0.9
4,395,080	-		GFF4393	0.44	-0.0
4,395,085	-		GFF4393	0.44	-0.6
4,395,085	-		GFF4393	0.44	-1.0
4,395,085	-		GFF4393	0.44	-0.2
4,395,085	-		GFF4393	0.44	+0.4
4,395,085	-		GFF4393	0.44	+1.3
4,395,085	-		GFF4393	0.44	-0.3
4,395,087	+		GFF4393	0.44	-0.7
4,395,087	+		GFF4393	0.44	+0.7
4,395,087	+		GFF4393	0.44	-1.6
4,395,087	+		GFF4393	0.44	+0.6
4,395,087	+		GFF4393	0.44	+1.5
4,395,087	+		GFF4393	0.44	+0.5
4,395,095	-		GFF4393	0.45	-0.9
4,395,095	-		GFF4393	0.45	+0.1
4,395,095	-		GFF4393	0.45	+0.3
4,395,095	-		GFF4393	0.45	-0.5
4,395,095	-		GFF4393	0.45	+2.1
4,395,095	-		GFF4393	0.45	-1.2
4,395,095	-		GFF4393	0.45	-0.6
4,395,095	-		GFF4393	0.45	+0.9
4,395,095	-		GFF4393	0.45	-0.1
4,395,153	+		GFF4393	0.49	-2.1
4,395,189	-		GFF4393	0.52	-0.2
4,395,189	-		GFF4393	0.52	+0.8
4,395,225	-		GFF4393	0.54	+0.5
4,395,225	-		GFF4393	0.54	+0.2
4,395,225	-		GFF4393	0.54	-0.8
4,395,297	+		GFF4393	0.60	-2.9
4,395,329	+		GFF4393	0.62	+1.1
4,395,358	+		GFF4393	0.64	+0.0
4,395,366	-		GFF4393	0.65	+0.1
4,395,394	+		GFF4393	0.67	-0.1
4,395,406	+		GFF4393	0.68	-1.1
4,395,416	+		GFF4393	0.69	+0.3
4,395,424	-		GFF4393	0.69	+0.2
4,395,428	+		GFF4393	0.69	-0.4
4,395,449	-		GFF4393	0.71	-0.3
4,395,470	+		GFF4393	0.73	-0.2
4,395,470	-		GFF4393	0.73	+0.5
4,395,493	-		GFF4393	0.74	-0.4
4,395,537	+		GFF4393	0.78	-0.3
4,395,562	-		GFF4393	0.79	+0.4
4,395,564	+		GFF4393	0.80	-0.4
4,395,583	+		GFF4393	0.81	-0.2
4,395,585	-		GFF4393	0.81	-0.3
4,395,589	-		GFF4393	0.81	-1.2
4,395,590	+		GFF4393	0.81	+0.4
4,395,592	+		GFF4393	0.82	+0.9
4,395,648	+		GFF4393	0.86	-0.0
4,395,670	+		GFF4393	0.87	+0.8
4,395,670	+		GFF4393	0.87	+2.0
4,395,678	-		GFF4393	0.88	-0.2
4,395,678	-		GFF4393	0.88	-0.1
4,395,687	+		GFF4393	0.89	+0.3
4,395,687	+		GFF4393	0.89	+0.7
4,395,688	-		GFF4393	0.89	-0.2
4,395,791	-				+0.6
4,395,792	+				-0.9
4,395,805	-				+0.3
4,395,817	-				-2.2
4,395,832	-				-0.7
4,395,842	+				-0.5
4,395,842	+				+0.2
4,395,842	+				+1.0
4,395,850	-				-1.0
4,395,850	-				-0.2
4,395,850	-				+1.0
4,395,852	+				-0.2
4,395,855	-				+0.0
4,395,882	+				+0.3
4,395,882	+				-0.4
4,395,882	+				-0.8
4,395,882	+				-0.6
4,395,882	+				+0.5
4,395,882	+				-0.5
4,395,882	+				+1.2
4,395,882	+				+1.2
4,395,890	-				-0.4
4,395,890	-				+0.5
4,395,890	-				-0.1
4,395,890	-				-0.5
4,395,890	-				+0.0
4,395,898	-				+0.3
4,395,915	-		GFF4394	0.10	+0.6
4,395,915	-		GFF4394	0.10	-0.2
4,395,915	-		GFF4394	0.10	-0.3
4,395,917	-		GFF4394	0.10	+0.3
4,395,946	-		GFF4394	0.14	+3.0
4,395,961	+		GFF4394	0.16	+0.3
4,395,961	+		GFF4394	0.16	-1.5
4,395,966	+		GFF4394	0.17	+0.9
4,395,966	+		GFF4394	0.17	-1.2
4,395,966	+		GFF4394	0.17	-0.4
4,395,966	+		GFF4394	0.17	+0.3
4,395,971	+		GFF4394	0.17	+1.0
4,395,982	+		GFF4394	0.19	+0.2
4,395,982	+		GFF4394	0.19	-0.6
4,395,989	-		GFF4394	0.19	-0.2
4,395,990	-		GFF4394	0.20	-0.1
4,396,039	-		GFF4394	0.26	+0.4
4,396,041	+		GFF4394	0.26	-1.5
4,396,041	+		GFF4394	0.26	-0.4
4,396,051	+		GFF4394	0.27	-0.1
4,396,059	-		GFF4394	0.28	-0.2
4,396,059	-		GFF4394	0.28	+0.1
4,396,059	-		GFF4394	0.28	-2.5
4,396,119	-		GFF4394	0.36	+0.0
4,396,123	+		GFF4394	0.36	+1.1
4,396,123	+		GFF4394	0.36	+0.7
4,396,173	+		GFF4394	0.42	+0.3
4,396,182	-		GFF4394	0.44	+0.4
4,396,200	+		GFF4394	0.46	+0.5
4,396,222	+		GFF4394	0.49	+0.1
4,396,230	-		GFF4394	0.50	+0.7
4,396,275	-		GFF4394	0.55	+0.9
4,396,305	+		GFF4394	0.59	-0.2
4,396,318	+		GFF4394	0.61	+0.0
4,396,326	-		GFF4394	0.62	-0.2
4,396,379	+		GFF4394	0.68	+0.9
4,396,380	+		GFF4394	0.68	-1.0
4,396,391	+		GFF4394	0.70	-0.5
4,396,398	-		GFF4394	0.71	+1.0
4,396,399	-		GFF4394	0.71	-1.8
4,396,415	+		GFF4394	0.73	+0.1
4,396,432	+		GFF4394	0.75	-0.8
4,396,432	+		GFF4394	0.75	+0.2
4,396,440	-		GFF4394	0.76	+0.2
4,396,446	+		GFF4394	0.77	-1.0
4,396,457	+		GFF4394	0.78	-0.3
4,396,457	+		GFF4394	0.78	+0.7
4,396,457	+		GFF4394	0.78	+1.1
4,396,457	+		GFF4394	0.78	+0.2
4,396,465	+		GFF4394	0.79	-0.3
4,396,465	+		GFF4394	0.79	+2.4
4,396,465	-		GFF4394	0.79	+0.9
4,396,473	-		GFF4394	0.80	+0.4
4,396,473	-		GFF4394	0.80	-0.8
4,396,473	-		GFF4394	0.80	+0.7
4,396,473	-		GFF4394	0.80	+0.9
4,396,474	-		GFF4394	0.80	-1.1
4,396,523	-		GFF4394	0.86	+0.1
4,396,538	-		GFF4394	0.88	+0.7
4,396,605	-				-0.2
4,396,632	-				-0.2
4,396,773	-		GFF4395	0.47	-0.4
4,396,784	+		GFF4395	0.51	-0.7
4,396,784	+		GFF4395	0.51	-1.2
4,396,794	+		GFF4395	0.55	+0.5
4,396,843	-		GFF4395	0.74	+1.0
4,396,862	+		GFF4395	0.81	+0.4
4,396,865	-		GFF4395	0.83	-1.6
4,396,865	-		GFF4395	0.83	-0.4
4,396,867	+		GFF4395	0.83	-0.4
4,396,867	+		GFF4395	0.83	-1.0
4,396,875	-		GFF4395	0.86	-1.6
4,396,877	+		GFF4395	0.87	-0.0
4,396,882	+		GFF4395	0.89	-0.6
4,396,944	+				-0.9
4,396,952	-				-1.0
4,396,952	-				+0.4
4,396,959	+				+0.6
4,396,985	+				-0.7
4,396,993	-				-1.0
4,397,002	+				-0.7
4,397,002	-				-0.4
4,397,065	-				+1.2
4,397,114	+				-0.9
4,397,121	+				+0.5
4,397,129	-				+0.1
4,397,131	+				+1.2
4,397,137	-				+1.0
4,397,163	-				+0.5
4,397,218	-		GFF4396	0.20	-0.0
4,397,226	-		GFF4396	0.22	+1.5
4,397,287	-		GFF4396	0.37	+1.2
4,397,294	-		GFF4396	0.38	-0.2
4,397,310	+		GFF4396	0.42	+0.9
4,397,310	+		GFF4396	0.42	-1.7
4,397,310	+		GFF4396	0.42	-0.7
4,397,315	+		GFF4396	0.43	+0.1
4,397,318	-		GFF4396	0.44	+0.7
4,397,318	-		GFF4396	0.44	-0.2
4,397,318	-		GFF4396	0.44	-0.5
4,397,325	+		GFF4396	0.46	-0.9
4,397,330	+		GFF4396	0.47	-0.2
4,397,333	-		GFF4396	0.48	+0.4
4,397,333	-		GFF4396	0.48	-0.4
4,397,337	+		GFF4396	0.49	+0.3
4,397,346	+		GFF4396	0.51	-0.0
4,397,354	-		GFF4396	0.53	-0.8
4,397,354	-		GFF4396	0.53	+0.2
4,397,365	+		GFF4396	0.55	+0.6
4,397,373	-		GFF4396	0.57	+0.4
4,397,387	+		GFF4396	0.60	-1.4
4,397,417	-		GFF4396	0.68	+0.9
4,397,427	+		GFF4396	0.70	-2.4
4,397,429	-		GFF4396	0.70	-0.9
4,397,444	-		GFF4396	0.74	+0.9
4,397,504	-		GFF4396	0.88	-2.5
4,397,522	+				-0.4
4,397,522	-				-1.1
4,397,530	-				-0.1
4,397,536	+				-0.3
4,397,541	+				-0.8
4,397,549	-				+0.1
4,397,573	+				-0.9
4,397,575	-				-0.5
4,397,575	-				+1.2
4,397,583	-				+0.9
4,397,583	-				+0.2
4,397,585	+				+0.2
4,397,593	-				-0.7
4,397,610	+				-1.4
4,397,620	+				-0.4
4,397,620	+				-0.4
4,397,623	-				+1.8