Strain Fitness in Sphingobium sp. HT1-2 around GFF4388

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,387,838	+		GFF4387	0.42	-0.3
4,387,853	+		GFF4387	0.43	-2.5
4,387,877	+		GFF4387	0.44	+0.0
4,387,885	-		GFF4387	0.45	+0.6
4,387,885	-		GFF4387	0.45	+0.7
4,387,885	-		GFF4387	0.45	+0.3
4,387,919	-		GFF4387	0.47	+0.3
4,387,919	-		GFF4387	0.47	-1.8
4,387,927	+		GFF4387	0.47	-0.1
4,387,935	-		GFF4387	0.48	-0.1
4,387,935	-		GFF4387	0.48	-0.5
4,387,935	-		GFF4387	0.48	+0.2
4,387,945	+		GFF4387	0.48	-0.1
4,387,945	+		GFF4387	0.48	+0.3
4,387,945	-		GFF4387	0.48	+0.2
4,387,953	-		GFF4387	0.49	-0.2
4,387,961	+		GFF4387	0.49	-1.2
4,387,964	-		GFF4387	0.49	-0.5
4,387,964	-		GFF4387	0.49	-1.0
4,387,964	-		GFF4387	0.49	-0.3
4,387,977	+		GFF4387	0.50	-1.0
4,387,982	+		GFF4387	0.51	-0.8
4,387,982	+		GFF4387	0.51	+0.5
4,387,982	+		GFF4387	0.51	-1.9
4,387,982	+		GFF4387	0.51	-0.4
4,387,985	-		GFF4387	0.51	-1.2
4,387,985	-		GFF4387	0.51	+0.2
4,387,985	-		GFF4387	0.51	-0.2
4,387,985	-		GFF4387	0.51	-0.9
4,387,991	-		GFF4387	0.51	+0.0
4,387,991	-		GFF4387	0.51	-0.9
4,387,991	-		GFF4387	0.51	-0.5
4,387,992	-		GFF4387	0.51	-2.1
4,388,017	+		GFF4387	0.53	-1.2
4,388,017	+		GFF4387	0.53	+1.3
4,388,025	-		GFF4387	0.53	-1.0
4,388,025	-		GFF4387	0.53	-0.9
4,388,025	-		GFF4387	0.53	-1.4
4,388,026	+		GFF4387	0.53	-0.7
4,388,027	+		GFF4387	0.53	+0.5
4,388,030	+		GFF4387	0.53	-0.1
4,388,032	+		GFF4387	0.54	-0.5
4,388,032	+		GFF4387	0.54	+0.0
4,388,032	+		GFF4387	0.54	-0.6
4,388,032	+		GFF4387	0.54	+0.6
4,388,032	+		GFF4387	0.54	-1.8
4,388,032	+		GFF4387	0.54	-0.2
4,388,040	-		GFF4387	0.54	-0.5
4,388,040	-		GFF4387	0.54	-0.7
4,388,040	-		GFF4387	0.54	-1.7
4,388,040	-		GFF4387	0.54	-0.5
4,388,040	-		GFF4387	0.54	-1.1
4,388,040	-		GFF4387	0.54	-0.6
4,388,040	-		GFF4387	0.54	-0.4
4,388,042	+		GFF4387	0.54	-0.9
4,388,050	-		GFF4387	0.55	-0.1
4,388,050	-		GFF4387	0.55	-0.9
4,388,055	-		GFF4387	0.55	-0.7
4,388,061	+		GFF4387	0.55	+0.1
4,388,061	+		GFF4387	0.55	-0.8
4,388,061	+		GFF4387	0.55	-1.5
4,388,069	-		GFF4387	0.56	+0.3
4,388,071	+		GFF4387	0.56	-0.7
4,388,072	+		GFF4387	0.56	-1.8
4,388,093	-		GFF4387	0.57	+0.6
4,388,093	-		GFF4387	0.57	+0.5
4,388,093	-		GFF4387	0.57	-0.2
4,388,122	+		GFF4387	0.59	-0.3
4,388,122	+		GFF4387	0.59	+0.1
4,388,125	-		GFF4387	0.59	-2.8
4,388,139	+		GFF4387	0.60	-0.6
4,388,142	-		GFF4387	0.60	+0.5
4,388,147	-		GFF4387	0.60	-2.0
4,388,147	-		GFF4387	0.60	-0.4
4,388,149	-		GFF4387	0.60	+0.1
4,388,152	+		GFF4387	0.61	-0.9
4,388,163	-		GFF4387	0.61	-1.1
4,388,168	+		GFF4387	0.62	+0.3
4,388,196	+		GFF4387	0.63	-0.7
4,388,229	+		GFF4387	0.65	-0.5
4,388,237	-		GFF4387	0.66	-1.0
4,388,237	-		GFF4387	0.66	+0.1
4,388,237	-		GFF4387	0.66	+0.4
4,388,237	-		GFF4387	0.66	+0.6
4,388,246	-		GFF4387	0.66	+0.3
4,388,255	-		GFF4387	0.67	-2.2
4,388,255	-		GFF4387	0.67	+0.2
4,388,256	+		GFF4387	0.67	+0.6
4,388,275	-		GFF4387	0.68	-0.1
4,388,278	+		GFF4387	0.68	-0.3
4,388,294	-		GFF4387	0.69	-0.2
4,388,296	+		GFF4387	0.69	+0.7
4,388,306	+		GFF4387	0.70	+0.3
4,388,309	-		GFF4387	0.70	+0.7
4,388,318	+		GFF4387	0.70	-1.9
4,388,318	-		GFF4387	0.70	-0.9
4,388,325	+		GFF4387	0.71	+0.6
4,388,325	+		GFF4387	0.71	-0.7
4,388,325	+		GFF4387	0.71	-0.2
4,388,325	-		GFF4387	0.71	-0.9
4,388,328	+		GFF4387	0.71	-0.0
4,388,333	+		GFF4387	0.71	-1.6
4,388,333	+		GFF4387	0.71	-1.5
4,388,333	-		GFF4387	0.71	-1.4
4,388,333	-		GFF4387	0.71	-0.2
4,388,356	-		GFF4387	0.73	+1.1
4,388,365	+		GFF4387	0.73	+0.9
4,388,412	+		GFF4387	0.76	+0.1
4,388,414	+		GFF4387	0.76	-1.0
4,388,419	+		GFF4387	0.76	+0.6
4,388,420	-		GFF4387	0.76	+0.1
4,388,420	-		GFF4387	0.76	-1.5
4,388,429	-		GFF4387	0.77	-1.1
4,388,429	-		GFF4387	0.77	-1.1
4,388,452	+		GFF4387	0.78	+1.2
4,388,452	+		GFF4387	0.78	+0.2
4,388,452	+		GFF4387	0.78	+0.5
4,388,452	+		GFF4387	0.78	+0.2
4,388,460	-		GFF4387	0.79	-0.7
4,388,460	-		GFF4387	0.79	-1.2
4,388,460	-		GFF4387	0.79	-0.9
4,388,465	-		GFF4387	0.79	-0.5
4,388,513	+		GFF4387	0.82	-1.9
4,388,513	+		GFF4387	0.82	+0.2
4,388,521	-		GFF4387	0.82	+0.3
4,388,521	-		GFF4387	0.82	-0.8
4,388,529	-		GFF4387	0.83	-1.9
4,388,533	+		GFF4387	0.83	+0.1
4,388,535	+		GFF4387	0.83	-0.4
4,388,536	-		GFF4387	0.83	-0.9
4,388,567	-		GFF4387	0.85	-0.4
4,388,568	+		GFF4387	0.85	+0.7
4,388,568	+		GFF4387	0.85	+0.9
4,388,568	+		GFF4387	0.85	-0.2
4,388,568	+		GFF4387	0.85	-0.3
4,388,576	-		GFF4387	0.86	-0.0
4,388,598	-		GFF4387	0.87	-1.5
4,388,612	+		GFF4387	0.88	+0.4
4,388,628	+		GFF4387	0.89	-0.8
4,388,642	-		GFF4387	0.90	-2.1
4,388,644	-		GFF4387	0.90	-0.7
4,388,656	-				-0.7
4,388,656	-				+0.4
4,388,656	-				-0.3
4,388,678	-				-0.7
4,388,704	-				-0.6
4,388,718	+				+0.3
4,388,723	+				+0.0
4,388,723	+				+0.5
4,388,723	+				+0.9
4,388,737	+				-1.0
4,388,757	-				-0.9
4,388,785	+				+0.3
4,388,802	-				-0.7
4,388,803	-				+0.4
4,388,803	-				+0.5
4,388,828	+				+0.6
4,388,836	-				-0.3
4,388,850	+		GFF4388	0.16	+0.3
4,388,850	+		GFF4388	0.16	-0.8
4,388,855	+		GFF4388	0.19	-0.1
4,388,855	+		GFF4388	0.19	-1.2
4,388,855	+		GFF4388	0.19	-0.3
4,388,855	+		GFF4388	0.19	-1.5
4,388,856	-		GFF4388	0.19	+0.3
4,388,858	-		GFF4388	0.21	-0.7
4,388,858	-		GFF4388	0.21	-0.8
4,388,860	+		GFF4388	0.22	-1.0
4,388,860	+		GFF4388	0.22	-0.1
4,388,860	+		GFF4388	0.22	-0.6
4,388,860	+		GFF4388	0.22	+0.7
4,388,860	+		GFF4388	0.22	-0.3
4,388,860	+		GFF4388	0.22	+0.5
4,388,860	+		GFF4388	0.22	-0.9
4,388,860	+		GFF4388	0.22	+0.1
4,388,860	+		GFF4388	0.22	+0.6
4,388,860	+		GFF4388	0.22	-1.2
4,388,860	+		GFF4388	0.22	-0.1
4,388,860	+		GFF4388	0.22	-0.8
4,388,863	-		GFF4388	0.23	-0.6
4,388,863	-		GFF4388	0.23	+0.2
4,388,863	-		GFF4388	0.23	-0.6
4,388,863	-		GFF4388	0.23	+0.4
4,388,863	-		GFF4388	0.23	+0.7
4,388,863	-		GFF4388	0.23	+0.0
4,388,868	-		GFF4388	0.26	-2.8
4,388,868	-		GFF4388	0.26	+0.8
4,388,868	-		GFF4388	0.26	-0.2
4,388,868	-		GFF4388	0.26	+0.7
4,388,868	-		GFF4388	0.26	-0.5
4,388,868	-		GFF4388	0.26	-0.4
4,388,868	-		GFF4388	0.26	-1.1
4,388,868	-		GFF4388	0.26	+0.0
4,388,870	-		GFF4388	0.27	+0.4
4,388,871	+		GFF4388	0.27	+0.3
4,388,877	+		GFF4388	0.30	-1.2
4,388,879	-		GFF4388	0.31	-0.5
4,388,884	+		GFF4388	0.34	-0.4
4,388,884	+		GFF4388	0.34	-0.1
4,388,892	-		GFF4388	0.38	-0.7
4,388,928	+		GFF4388	0.56	-0.3
4,388,936	-		GFF4388	0.61	-0.0
4,388,949	+		GFF4388	0.67	-2.0
4,388,951	+		GFF4388	0.68	+1.3
4,388,954	+		GFF4388	0.70	-0.3
4,388,955	+		GFF4388	0.70	+1.3
4,388,974	+		GFF4388	0.80	-1.1
4,388,974	+		GFF4388	0.80	-1.8
4,389,013	-				-1.5
4,389,030	+				-1.7
4,389,030	-				-0.6
4,389,047	-				-1.0
4,389,052	+				+0.1
4,389,052	-				-0.7
4,389,052	-				-2.2
4,389,057	+				-0.7
4,389,057	+				-0.1
4,389,057	+				-0.7
4,389,060	-				-0.8
4,389,062	+				-0.7
4,389,062	+				-0.5
4,389,062	+				+0.8
4,389,062	+				-0.9
4,389,062	+				-0.9
4,389,062	+				-0.6
4,389,062	+				-1.4
4,389,062	+				+0.5
4,389,062	+				-0.7
4,389,062	+				-1.1
4,389,062	+				+0.7
4,389,065	-				+0.9
4,389,065	-				-0.1
4,389,065	-				-0.8
4,389,065	-				+0.6
4,389,065	-				-2.3
4,389,067	+				+0.3
4,389,067	+				-1.1
4,389,067	+				-0.3
4,389,067	+				+0.3
4,389,067	+				-0.7
4,389,067	+				-0.7
4,389,067	+				+0.7
4,389,067	+				-0.6
4,389,067	+				-0.2
4,389,067	+				+0.1
4,389,067	+				-1.1
4,389,067	+				-0.6
4,389,067	+				-1.7
4,389,067	+				-0.3
4,389,070	-				+0.0
4,389,070	-				-1.8
4,389,070	-				+0.1
4,389,070	-				-2.0
4,389,070	-				-1.9
4,389,070	-				-1.5
4,389,075	-				+0.0
4,389,075	-				-0.8
4,389,075	-				+1.0
4,389,075	-				-0.5
4,389,075	-				-2.7
4,389,075	-				+0.1
4,389,075	-				+0.8
4,389,075	-				-1.1
4,389,075	-				+1.0
4,389,075	-				-0.7
4,389,075	-				-0.3
4,389,075	-				-0.5
4,389,075	-				-1.2
4,389,080	-		GFF4389	0.11	+0.8
4,389,080	-		GFF4389	0.11	-0.0
4,389,080	-		GFF4389	0.11	+0.3
4,389,087	+		GFF4389	0.12	-0.3
4,389,100	+		GFF4389	0.14	+0.6
4,389,105	+		GFF4389	0.14	-2.1
4,389,105	+		GFF4389	0.14	-2.0
4,389,105	+		GFF4389	0.14	-1.2
4,389,106	+		GFF4389	0.15	-0.4
4,389,113	-		GFF4389	0.16	+0.6
4,389,113	-		GFF4389	0.16	-0.7
4,389,113	-		GFF4389	0.16	-0.2
4,389,113	-		GFF4389	0.16	+0.8
4,389,114	-		GFF4389	0.16	+0.1
4,389,114	-		GFF4389	0.16	-0.3
4,389,154	-		GFF4389	0.22	+0.1
4,389,163	+		GFF4389	0.23	+0.2
4,389,178	+		GFF4389	0.25	-0.9
4,389,178	+		GFF4389	0.25	-0.8
4,389,180	+		GFF4389	0.26	-0.2
4,389,218	+		GFF4389	0.32	-0.8
4,389,226	+		GFF4389	0.33	+0.5
4,389,226	+		GFF4389	0.33	-1.1
4,389,226	+		GFF4389	0.33	-2.2
4,389,226	+		GFF4389	0.33	-0.3
4,389,234	-		GFF4389	0.34	-0.0
4,389,234	-		GFF4389	0.34	-1.5
4,389,243	-		GFF4389	0.35	-0.7
4,389,262	-		GFF4389	0.38	+1.2
4,389,271	+		GFF4389	0.40	-0.8
4,389,275	+		GFF4389	0.40	+0.3
4,389,276	+		GFF4389	0.40	-0.2
4,389,276	+		GFF4389	0.40	+0.5
4,389,360	+		GFF4389	0.53	+0.6
4,389,362	+		GFF4389	0.53	+0.3
4,389,362	+		GFF4389	0.53	-1.0
4,389,362	+		GFF4389	0.53	+0.2
4,389,362	+		GFF4389	0.53	+0.1
4,389,362	+		GFF4389	0.53	-0.5
4,389,362	+		GFF4389	0.53	-0.2
4,389,362	+		GFF4389	0.53	+1.8
4,389,362	+		GFF4389	0.53	+0.8
4,389,370	-		GFF4389	0.54	-1.5
4,389,370	-		GFF4389	0.54	+0.2
4,389,370	-		GFF4389	0.54	-1.3
4,389,370	-		GFF4389	0.54	-0.1
4,389,370	-		GFF4389	0.54	-2.5
4,389,370	-		GFF4389	0.54	-1.2
4,389,370	-		GFF4389	0.54	-0.5
4,389,370	-		GFF4389	0.54	-1.8
4,389,370	-		GFF4389	0.54	-0.1
4,389,370	-		GFF4389	0.54	+1.8
4,389,370	-		GFF4389	0.54	+0.9
4,389,370	-		GFF4389	0.54	-0.1
4,389,395	+		GFF4389	0.58	-0.7
4,389,395	+		GFF4389	0.58	-0.1
4,389,395	+		GFF4389	0.58	-0.7
4,389,395	+		GFF4389	0.58	-0.5
4,389,395	+		GFF4389	0.58	+0.8
4,389,395	+		GFF4389	0.58	-0.5
4,389,395	+		GFF4389	0.58	-0.6
4,389,395	+		GFF4389	0.58	-0.4
4,389,395	+		GFF4389	0.58	+0.6
4,389,395	+		GFF4389	0.58	-0.6
4,389,395	+		GFF4389	0.58	-3.4
4,389,395	+		GFF4389	0.58	-1.0
4,389,395	+		GFF4389	0.58	+1.5
4,389,395	+		GFF4389	0.58	-0.1
4,389,395	+		GFF4389	0.58	-0.0
4,389,395	+		GFF4389	0.58	+0.3
4,389,403	-		GFF4389	0.59	-0.7
4,389,403	-		GFF4389	0.59	-2.0
4,389,403	-		GFF4389	0.59	-1.5
4,389,403	-		GFF4389	0.59	-0.6
4,389,403	-		GFF4389	0.59	+1.3
4,389,403	-		GFF4389	0.59	-1.1
4,389,403	-		GFF4389	0.59	-0.3
4,389,403	-		GFF4389	0.59	-1.5
4,389,403	-		GFF4389	0.59	+0.5
4,389,403	-		GFF4389	0.59	-0.2
4,389,403	-		GFF4389	0.59	+0.1
4,389,403	-		GFF4389	0.59	-1.7
4,389,403	-		GFF4389	0.59	-0.1
4,389,408	-		GFF4389	0.60	-0.5
4,389,410	+		GFF4389	0.60	-0.8
4,389,411	+		GFF4389	0.61	-0.7
4,389,425	-		GFF4389	0.63	+0.2
4,389,433	+		GFF4389	0.64	-0.7
4,389,433	+		GFF4389	0.64	+0.8
4,389,441	+		GFF4389	0.65	-0.5
4,389,441	+		GFF4389	0.65	-0.5
4,389,443	+		GFF4389	0.65	-0.1
4,389,443	+		GFF4389	0.65	+0.1
4,389,443	+		GFF4389	0.65	-0.1
4,389,443	+		GFF4389	0.65	-1.7
4,389,449	-		GFF4389	0.66	+0.0
4,389,449	-		GFF4389	0.66	+0.4
4,389,449	-		GFF4389	0.66	-0.7
4,389,451	-		GFF4389	0.67	-0.3
4,389,451	-		GFF4389	0.67	+0.1
4,389,451	-		GFF4389	0.67	-0.1
4,389,451	-		GFF4389	0.67	-0.5
4,389,451	-		GFF4389	0.67	+0.9
4,389,451	-		GFF4389	0.67	-0.7
4,389,451	-		GFF4389	0.67	-1.8
4,389,451	-		GFF4389	0.67	+1.0
4,389,451	-		GFF4389	0.67	-0.1
4,389,451	-		GFF4389	0.67	-0.3
4,389,451	-		GFF4389	0.67	-0.3
4,389,451	-		GFF4389	0.67	-0.3
4,389,451	-		GFF4389	0.67	+0.5
4,389,451	-		GFF4389	0.67	-1.0
4,389,451	-		GFF4389	0.67	+0.7
4,389,481	-		GFF4389	0.71	-0.1
4,389,486	+		GFF4389	0.72	-0.7
4,389,491	+		GFF4389	0.73	+0.3
4,389,491	+		GFF4389	0.73	-0.1
4,389,500	+		GFF4389	0.74	+0.4
4,389,501	+		GFF4389	0.74	+0.3
4,389,502	+		GFF4389	0.74	-0.6
4,389,510	-		GFF4389	0.76	-0.1
4,389,525	-		GFF4389	0.78	+0.0
4,389,544	-		GFF4389	0.81	-0.1
4,389,546	+		GFF4389	0.81	-1.4
4,389,547	+		GFF4389	0.81	-0.7
4,389,559	+		GFF4389	0.83	-0.2
4,389,559	+		GFF4389	0.83	-0.2
4,389,564	+		GFF4389	0.84	+0.3
4,389,564	+		GFF4389	0.84	-1.0
4,389,572	-		GFF4389	0.85	-1.0
4,389,572	-		GFF4389	0.85	-1.7
4,389,572	-		GFF4389	0.85	-0.7
4,389,578	+		GFF4389	0.86	+0.3
4,389,584	-		GFF4389	0.87	-0.1
4,389,604	-		GFF4389	0.90	-0.4
4,389,615	+				-0.4
4,389,666	+				+0.3
4,389,684	-				-1.5
4,389,694	+				-0.1
4,389,694	+				-0.1
4,389,702	-				+0.1
4,389,702	-				+0.8
4,389,702	-				-2.1
4,389,704	+				+0.3
4,389,704	+				+0.8
4,389,712	+				+0.2
4,389,712	-				+0.6
4,389,712	-				-0.0
4,389,715	+				-0.6
4,389,715	+				-0.6
4,389,720	-				-0.2
4,389,723	+				-0.7
4,389,723	+				+0.8
4,389,723	+				-0.4
4,389,723	-				+1.4
4,389,723	-				-2.2
4,389,723	-				+0.6
4,389,723	-				-0.1
4,389,731	-				+0.4
4,389,733	+				-0.5
4,389,733	+				-0.7
4,389,733	+				+0.8
4,389,733	-				-0.5
4,389,788	+				-1.0
4,389,788	+				+0.3
4,389,815	+				+0.1
4,389,844	+				+0.6
4,389,844	+				-0.4
4,389,844	+				-2.9
4,389,844	+				-0.5
4,389,844	+				+0.6
4,389,852	-				-0.1
4,389,852	-				-0.1
4,389,852	-				-1.1
4,389,852	-				+0.7
4,389,852	-				-2.9
4,389,852	-				+0.3
4,389,852	-				-0.7
4,389,852	-				+0.3
4,389,852	-				+0.7
4,389,905	+				-0.6
4,389,913	-				-2.0
4,389,914	+				+1.4
4,389,914	+				+0.5
4,389,914	+				-1.0
4,389,922	-				-3.5
4,389,922	-				-0.5
4,389,924	+				-0.2
4,389,924	+				-0.5
4,389,924	+				-0.2
4,389,924	+				+0.8
4,389,929	+				-0.8
4,389,930	-				-0.9
4,389,930	-				-0.4
4,389,932	-				+1.0
4,389,940	+				-2.0
4,389,940	+				-0.5
4,389,940	+				-1.0
4,389,940	+				-0.3
4,389,940	+				-0.4
4,389,948	-				-2.2
4,389,948	-				-0.2
4,389,948	-				-1.3
4,389,948	-				+0.9
4,389,948	-				-0.1
4,389,948	-				-0.4
4,389,951	+				-0.3
4,389,951	+				+0.7
4,389,959	-				+0.1
4,389,985	-				-1.1
4,389,995	+				-0.7
4,389,995	+				-0.7
4,389,998	-				+0.7
4,389,999	-				+0.9
4,390,004	-				+0.7
4,390,012	+				-1.9