Strain Fitness in Sphingobium sp. HT1-2 around GFF4372

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,371,886	+		GFF4371	0.46	-1.3
4,371,886	+		GFF4371	0.46	+1.2
4,371,894	-		GFF4371	0.47	-0.9
4,371,899	-		GFF4371	0.47	-0.3
4,371,903	+		GFF4371	0.47	+0.6
4,371,913	+		GFF4371	0.48	-1.7
4,371,913	+		GFF4371	0.48	-0.4
4,371,919	+		GFF4371	0.48	+0.2
4,371,919	+		GFF4371	0.48	-0.9
4,371,921	-		GFF4371	0.48	+0.5
4,371,924	+		GFF4371	0.48	+0.1
4,371,924	+		GFF4371	0.48	-0.7
4,371,927	-		GFF4371	0.48	-0.6
4,371,939	+		GFF4371	0.49	-1.8
4,371,939	+		GFF4371	0.49	+0.6
4,371,939	+		GFF4371	0.49	+0.5
4,371,945	-		GFF4371	0.49	-0.1
4,371,947	-		GFF4371	0.49	-1.1
4,371,947	-		GFF4371	0.49	-0.8
4,371,947	-		GFF4371	0.49	-1.9
4,371,947	-		GFF4371	0.49	+1.4
4,372,007	+		GFF4371	0.53	-1.8
4,372,015	-		GFF4371	0.53	+0.1
4,372,015	-		GFF4371	0.53	+0.1
4,372,015	-		GFF4371	0.53	-0.2
4,372,044	-		GFF4371	0.55	-0.4
4,372,070	+		GFF4371	0.56	-0.5
4,372,083	+		GFF4371	0.57	-1.1
4,372,087	+		GFF4371	0.57	-0.3
4,372,095	-		GFF4371	0.57	-1.1
4,372,095	-		GFF4371	0.57	-0.7
4,372,101	+		GFF4371	0.58	-0.1
4,372,108	-		GFF4371	0.58	-0.2
4,372,114	-		GFF4371	0.58	-0.9
4,372,181	-		GFF4371	0.62	+0.1
4,372,181	-		GFF4371	0.62	+0.2
4,372,186	+		GFF4371	0.62	-2.2
4,372,189	-		GFF4371	0.62	-0.3
4,372,196	+		GFF4371	0.63	-1.7
4,372,206	+		GFF4371	0.63	-0.9
4,372,223	+		GFF4371	0.64	+1.4
4,372,243	+		GFF4371	0.65	+0.1
4,372,251	-		GFF4371	0.66	-0.3
4,372,267	-		GFF4371	0.67	-2.6
4,372,276	-		GFF4371	0.67	-1.1
4,372,279	+		GFF4371	0.67	-1.2
4,372,279	+		GFF4371	0.67	-0.1
4,372,286	-		GFF4371	0.68	+0.2
4,372,301	-		GFF4371	0.68	+0.4
4,372,307	+		GFF4371	0.69	+0.0
4,372,314	+		GFF4371	0.69	+0.4
4,372,317	-		GFF4371	0.69	-0.8
4,372,319	+		GFF4371	0.69	-0.3
4,372,319	+		GFF4371	0.69	+0.4
4,372,319	+		GFF4371	0.69	-0.2
4,372,322	-		GFF4371	0.70	-1.3
4,372,322	-		GFF4371	0.70	-1.4
4,372,322	-		GFF4371	0.70	-0.8
4,372,327	-		GFF4371	0.70	-1.5
4,372,327	-		GFF4371	0.70	+0.5
4,372,330	-		GFF4371	0.70	-0.4
4,372,332	+		GFF4371	0.70	+1.1
4,372,336	+		GFF4371	0.70	-1.3
4,372,344	-		GFF4371	0.71	+0.1
4,372,391	+		GFF4371	0.73	-1.6
4,372,395	+		GFF4371	0.74	+0.0
4,372,396	+		GFF4371	0.74	-1.4
4,372,399	-		GFF4371	0.74	-2.1
4,372,401	+		GFF4371	0.74	-1.3
4,372,401	+		GFF4371	0.74	+1.2
4,372,411	+		GFF4371	0.74	-0.4
4,372,411	+		GFF4371	0.74	-1.0
4,372,429	-		GFF4371	0.75	-0.2
4,372,446	+		GFF4371	0.76	+0.5
4,372,463	-		GFF4371	0.77	+0.0
4,372,480	-		GFF4371	0.78	+0.4
4,372,482	-		GFF4371	0.78	-0.6
4,372,482	-		GFF4371	0.78	-2.1
4,372,489	-		GFF4371	0.79	+0.5
4,372,500	-		GFF4371	0.79	-0.1
4,372,503	+		GFF4371	0.79	-0.4
4,372,503	+		GFF4371	0.79	-0.1
4,372,503	+		GFF4371	0.79	+0.4
4,372,511	-		GFF4371	0.80	+0.7
4,372,511	-		GFF4371	0.80	-0.5
4,372,517	-		GFF4371	0.80	-0.1
4,372,533	+		GFF4371	0.81	+0.5
4,372,537	+		GFF4371	0.81	+0.2
4,372,548	+		GFF4371	0.82	-0.3
4,372,585	+		GFF4371	0.84	+0.5
4,372,593	-		GFF4371	0.84	-0.7
4,372,593	-		GFF4371	0.84	-2.4
4,372,594	+		GFF4371	0.84	+1.4
4,372,609	+		GFF4371	0.85	+0.5
4,372,612	-		GFF4371	0.85	+0.4
4,372,619	+		GFF4371	0.86	+0.4
4,372,619	+		GFF4371	0.86	-1.6
4,372,627	-		GFF4371	0.86	+0.5
4,372,627	-		GFF4371	0.86	+0.5
4,372,627	-		GFF4371	0.86	-0.2
4,372,636	+		GFF4371	0.87	-0.6
4,372,641	+		GFF4371	0.87	-1.6
4,372,657	-		GFF4371	0.88	+0.1
4,372,666	+		GFF4371	0.88	-0.4
4,372,666	+		GFF4371	0.88	+0.0
4,372,666	+		GFF4371	0.88	+0.7
4,372,674	+		GFF4371	0.89	+0.2
4,372,676	+		GFF4371	0.89	-1.4
4,372,692	+		GFF4371	0.90	-0.2
4,372,696	+		GFF4371	0.90	+0.2
4,372,700	-				-0.2
4,372,702	+				-1.0
4,372,704	+				-0.6
4,372,704	-				+0.0
4,372,705	+				-1.8
4,372,710	-				+0.0
4,372,710	-				-0.4
4,372,711	+				-0.9
4,372,712	-				-0.1
4,372,712	-				-0.9
4,372,714	+				+0.4
4,372,745	-				+0.8
4,372,746	+				+0.3
4,372,746	+				-1.1
4,372,746	+				+0.9
4,372,746	-				-0.4
4,372,747	+				-0.5
4,372,747	-				-2.1
4,372,747	-				-0.8
4,372,749	-				-0.3
4,372,754	-				-2.1
4,372,754	-				+0.0
4,372,754	-				+0.8
4,372,754	-				+0.5
4,372,754	-				-1.1
4,372,754	-				-0.1
4,372,765	+				+0.6
4,372,801	+				-0.7
4,372,801	+				+0.2
4,372,809	-				-0.7
4,372,809	-				-2.1
4,372,816	-				-1.8
4,372,818	+				+0.3
4,372,820	-				-0.2
4,372,830	-				-0.3
4,372,845	+				-0.1
4,372,859	-				+0.4
4,372,861	-				-0.5
4,372,862	+				-1.0
4,372,867	+				+0.6
4,372,867	+				-1.1
4,372,867	+				-0.4
4,372,867	+				-1.7
4,372,867	+				-1.4
4,372,867	+				-2.1
4,372,867	+				-0.9
4,372,867	+				-0.7
4,372,867	+				-1.2
4,372,867	+				-0.1
4,372,867	+				-0.4
4,372,867	+				-1.5
4,372,867	+				-0.2
4,372,875	-				-0.3
4,372,875	-				-0.6
4,372,875	-				-0.4
4,372,875	-				-0.4
4,372,875	-				-0.5
4,372,875	-				+0.5
4,372,875	-				+1.1
4,372,875	-				-2.4
4,372,875	-				-0.5
4,372,875	-				-0.3
4,372,875	-				-0.6
4,372,875	-				-1.5
4,372,912	+				-0.6
4,372,917	+				+0.9
4,372,920	-				-1.5
4,372,920	-				-0.1
4,372,925	-				+0.0
4,372,925	-				-1.1
4,372,925	-				-1.4
4,372,925	-				-1.1
4,372,925	-				-0.3
4,372,930	-				-0.5
4,372,930	-				+0.3
4,372,932	+				-1.9
4,372,937	-				-1.5
4,372,947	+				-1.1
4,372,947	+				+0.1
4,372,954	-				-0.3
4,372,954	-				+0.5
4,372,955	-				-2.0
4,372,955	-				+1.0
4,372,955	-				-1.6
4,372,973	+				-0.3
4,372,973	+				-1.6
4,372,978	+				-0.6
4,372,978	+				-0.3
4,372,978	+				+0.0
4,372,978	+				-0.3
4,372,978	+				+0.4
4,372,980	+				-0.1
4,372,980	+				-1.1
4,372,980	+				+0.8
4,372,980	+				-0.4
4,372,980	+				-0.2
4,372,980	+				-1.0
4,372,980	+				+0.2
4,372,980	+				+0.8
4,372,980	+				-1.5
4,372,980	+				+0.7
4,372,980	+				-0.3
4,372,980	+				-2.6
4,372,980	+				-0.8
4,372,980	+				-0.2
4,372,980	+				-0.4
4,372,980	+				+0.8
4,372,980	+				-1.6
4,372,980	+				-0.9
4,372,980	+				-0.1
4,372,980	+				-0.6
4,372,980	+				-0.4
4,372,980	+				-1.0
4,372,980	+				-0.8
4,372,980	+				-2.1
4,372,980	+				-1.5
4,372,980	+				-0.4
4,372,980	+				-0.6
4,372,980	+				-1.6
4,372,980	+				-0.4
4,372,980	+				+0.2
4,372,980	+				-0.5
4,372,980	+				+0.3
4,372,980	+				+0.4
4,372,980	+				+0.7
4,372,980	+				+0.6
4,372,980	+				+0.4
4,372,980	+				+0.1
4,372,980	+				+0.0
4,372,980	+				-0.6
4,372,980	+				-2.4
4,372,980	+				-1.1
4,372,980	+				+0.1
4,372,980	+				+0.9
4,372,980	+				-0.2
4,372,980	+				-0.4
4,372,980	+				-0.3
4,372,980	+				+0.4
4,372,980	+				-1.6
4,372,980	+				-0.8
4,372,980	+				-0.1
4,372,980	+				-1.2
4,372,980	+				-1.5
4,372,980	+				-2.2
4,372,980	+				+0.6
4,372,980	+				-1.6
4,372,980	+				-0.8
4,372,980	+				+0.1
4,372,980	+				+0.5
4,372,980	+				+0.1
4,372,980	+				+0.5
4,372,980	+				+0.1
4,372,981	-				+0.3
4,372,981	-				+0.5
4,372,981	-				+0.1
4,372,986	-				+0.0
4,372,986	-				-0.4
4,372,988	-				-0.1
4,372,988	-				-1.0
4,372,988	-				+0.9
4,372,988	-				+0.5
4,372,988	-				-1.8
4,372,988	-				+0.3
4,372,988	-				-2.0
4,372,988	-				-1.1
4,372,988	-				-0.5
4,372,988	-				+0.8
4,372,988	-				-0.1
4,372,988	-				+0.4
4,372,988	-				-0.3
4,372,988	-				-1.6
4,372,988	-				-1.6
4,372,988	-				-0.3
4,372,988	-				+0.4
4,372,988	-				-1.2
4,372,988	-				-1.3
4,372,988	-				-0.1
4,372,988	-				-1.4
4,372,988	-				-0.6
4,372,988	-				-0.3
4,372,988	-				-1.2
4,372,988	-				-0.9
4,372,988	-				-1.5
4,372,988	-				-1.0
4,372,988	-				-0.5
4,372,988	-				+1.0
4,372,988	-				-1.0
4,372,988	-				-0.6
4,372,988	-				+0.4
4,372,988	-				-0.6
4,372,988	-				-1.6
4,372,988	-				+0.1
4,372,988	-				+0.6
4,372,988	-				-0.0
4,372,988	-				-0.4
4,372,988	-				-1.1
4,372,988	-				+0.0
4,372,988	-				+0.1
4,372,988	-				+0.4
4,372,988	-				+0.3
4,372,988	-				+0.0
4,372,988	-				-0.6
4,372,988	-				+0.3
4,372,988	-				-1.3
4,372,988	-				+1.0
4,372,988	-				+0.6
4,372,988	-				-0.2
4,372,988	-				-0.6
4,372,988	-				-1.4
4,372,988	-				-2.3
4,372,988	-				-3.1
4,372,988	-				+0.6
4,372,988	-				+1.4
4,372,988	-				+0.5
4,372,988	-				+0.2
4,373,003	+				-1.9
4,373,003	+				-0.0
4,373,011	-				-0.2
4,373,025	-				-1.0
4,373,045	+				-1.6
4,373,045	+				-2.9
4,373,045	+				+1.0
4,373,045	+				-0.8
4,373,053	-				-2.9
4,373,053	-				+1.6
4,373,053	-				-0.1
4,373,053	-				-0.4
4,373,053	-				-0.1
4,373,053	-				+0.1
4,373,055	+				-1.5
4,373,062	+				-1.1
4,373,070	+				-1.2
4,373,070	+				+0.6
4,373,070	-				-0.7
4,373,075	+				+0.7
4,373,078	-				-0.8
4,373,078	-				+0.0
4,373,092	+				-1.1
4,373,109	+				-0.9
4,373,127	-		GFF4372	0.11	-1.6
4,373,151	+		GFF4372	0.12	-0.6
4,373,152	-		GFF4372	0.12	+1.5
4,373,158	+		GFF4372	0.12	-0.6
4,373,158	+		GFF4372	0.12	+0.1
4,373,158	+		GFF4372	0.12	-0.3
4,373,158	+		GFF4372	0.12	+0.5
4,373,158	+		GFF4372	0.12	+1.4
4,373,158	+		GFF4372	0.12	-1.2
4,373,158	+		GFF4372	0.12	-0.2
4,373,158	+		GFF4372	0.12	+0.4
4,373,158	+		GFF4372	0.12	+1.0
4,373,158	+		GFF4372	0.12	-1.4
4,373,158	+		GFF4372	0.12	-0.1
4,373,158	+		GFF4372	0.12	-0.4
4,373,159	-		GFF4372	0.12	-0.4
4,373,159	-		GFF4372	0.12	-2.1
4,373,159	-		GFF4372	0.12	+0.9
4,373,159	-		GFF4372	0.12	-0.6
4,373,159	-		GFF4372	0.12	-1.2
4,373,160	-		GFF4372	0.12	-0.6
4,373,166	-		GFF4372	0.12	-0.8
4,373,166	-		GFF4372	0.12	-1.8
4,373,166	-		GFF4372	0.12	+0.6
4,373,166	-		GFF4372	0.12	-0.3
4,373,166	-		GFF4372	0.12	+0.7
4,373,166	-		GFF4372	0.12	+0.1
4,373,166	-		GFF4372	0.12	-0.5
4,373,196	+		GFF4372	0.14	-1.5
4,373,197	-		GFF4372	0.14	-1.2
4,373,202	-		GFF4372	0.14	-1.0
4,373,203	+		GFF4372	0.14	+0.7
4,373,204	-		GFF4372	0.14	-1.0
4,373,212	-		GFF4372	0.14	+0.4
4,373,230	+		GFF4372	0.15	-1.9
4,373,238	-		GFF4372	0.15	+0.4
4,373,238	-		GFF4372	0.15	-1.5
4,373,238	-		GFF4372	0.15	+0.6
4,373,238	-		GFF4372	0.15	-0.0
4,373,247	+		GFF4372	0.16	-0.7
4,373,248	-		GFF4372	0.16	-0.9
4,373,290	+		GFF4372	0.18	-1.1
4,373,298	-		GFF4372	0.18	-0.7
4,373,302	+		GFF4372	0.18	-0.1
4,373,310	+		GFF4372	0.19	-0.4
4,373,310	-		GFF4372	0.19	+0.5
4,373,313	+		GFF4372	0.19	+1.3
4,373,313	+		GFF4372	0.19	-0.2
4,373,327	+		GFF4372	0.19	-0.6
4,373,331	-		GFF4372	0.19	-0.1
4,373,331	-		GFF4372	0.19	-0.9
4,373,332	+		GFF4372	0.20	-2.1
4,373,340	-		GFF4372	0.20	+0.3
4,373,355	+		GFF4372	0.21	+1.4
4,373,356	+		GFF4372	0.21	+1.3
4,373,363	-		GFF4372	0.21	+0.8
4,373,364	-		GFF4372	0.21	-0.1
4,373,370	-		GFF4372	0.21	-0.4
4,373,377	+		GFF4372	0.21	+0.1
4,373,385	-		GFF4372	0.22	+0.7
4,373,385	-		GFF4372	0.22	+0.5
4,373,385	-		GFF4372	0.22	-0.7
4,373,385	-		GFF4372	0.22	+1.0
4,373,418	-		GFF4372	0.23	+0.1
4,373,427	-		GFF4372	0.24	-1.4
4,373,452	+		GFF4372	0.25	+1.5
4,373,453	-		GFF4372	0.25	+0.5
4,373,453	-		GFF4372	0.25	-0.1
4,373,454	+		GFF4372	0.25	+0.2
4,373,454	+		GFF4372	0.25	-0.2
4,373,459	+		GFF4372	0.25	+0.8
4,373,460	-		GFF4372	0.25	+1.5
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