Strain Fitness in Sphingobium sp. HT1-2 around GFF4018

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,042,706	+		GFF4017	0.27	+0.1
4,042,706	+		GFF4017	0.27	+0.2
4,042,714	-		GFF4017	0.28	+1.0
4,042,714	-		GFF4017	0.28	+0.2
4,042,743	+		GFF4017	0.30	-0.3
4,042,743	+		GFF4017	0.30	-0.7
4,042,743	+		GFF4017	0.30	-0.8
4,042,745	+		GFF4017	0.30	+0.7
4,042,748	+		GFF4017	0.30	-0.4
4,042,751	-		GFF4017	0.30	-1.5
4,042,756	+		GFF4017	0.31	-0.1
4,042,756	+		GFF4017	0.31	+1.0
4,042,756	-		GFF4017	0.31	-0.1
4,042,756	-		GFF4017	0.31	-1.5
4,042,756	-		GFF4017	0.31	-0.4
4,042,756	-		GFF4017	0.31	+0.5
4,042,764	-		GFF4017	0.31	+0.2
4,042,769	-		GFF4017	0.32	-0.7
4,042,771	-		GFF4017	0.32	-1.5
4,042,778	+		GFF4017	0.32	-0.7
4,042,837	-		GFF4017	0.37	+0.8
4,042,837	-		GFF4017	0.37	-1.6
4,042,844	+		GFF4017	0.37	-1.4
4,042,851	+		GFF4017	0.38	-0.2
4,042,868	+		GFF4017	0.39	+1.5
4,042,868	+		GFF4017	0.39	-0.4
4,042,868	+		GFF4017	0.39	+0.4
4,042,873	+		GFF4017	0.39	-0.5
4,042,876	-		GFF4017	0.40	-0.8
4,042,881	-		GFF4017	0.40	-0.3
4,042,891	+		GFF4017	0.41	-1.2
4,042,904	+		GFF4017	0.42	-2.5
4,042,926	+		GFF4017	0.43	+0.2
4,042,930	+		GFF4017	0.44	+0.3
4,042,939	+		GFF4017	0.44	-2.2
4,042,939	+		GFF4017	0.44	+0.6
4,042,949	+		GFF4017	0.45	-0.2
4,042,949	+		GFF4017	0.45	-0.1
4,042,957	+		GFF4017	0.46	-0.3
4,042,966	+		GFF4017	0.46	-0.3
4,042,973	-		GFF4017	0.47	-0.0
4,042,974	-		GFF4017	0.47	-0.4
4,043,010	+		GFF4017	0.50	+0.1
4,043,020	+		GFF4017	0.50	+0.6
4,043,042	+		GFF4017	0.52	-1.6
4,043,042	+		GFF4017	0.52	+1.2
4,043,049	+		GFF4017	0.53	-2.1
4,043,062	+		GFF4017	0.54	-0.3
4,043,062	+		GFF4017	0.54	-0.2
4,043,062	+		GFF4017	0.54	+0.0
4,043,064	+		GFF4017	0.54	+0.8
4,043,064	+		GFF4017	0.54	-1.8
4,043,064	+		GFF4017	0.54	+1.5
4,043,064	+		GFF4017	0.54	-0.5
4,043,064	+		GFF4017	0.54	-0.3
4,043,074	+		GFF4017	0.54	+1.4
4,043,074	+		GFF4017	0.54	-0.0
4,043,074	+		GFF4017	0.54	-0.4
4,043,074	+		GFF4017	0.54	+0.7
4,043,074	+		GFF4017	0.54	+0.3
4,043,074	+		GFF4017	0.54	+0.6
4,043,074	+		GFF4017	0.54	+1.0
4,043,074	+		GFF4017	0.54	-0.1
4,043,074	+		GFF4017	0.54	+0.6
4,043,074	+		GFF4017	0.54	+0.1
4,043,074	+		GFF4017	0.54	-0.7
4,043,079	+		GFF4017	0.55	-0.6
4,043,079	+		GFF4017	0.55	-1.4
4,043,082	-		GFF4017	0.55	+1.7
4,043,082	-		GFF4017	0.55	-0.2
4,043,082	-		GFF4017	0.55	-0.6
4,043,082	-		GFF4017	0.55	-1.0
4,043,082	-		GFF4017	0.55	-0.6
4,043,082	-		GFF4017	0.55	+0.4
4,043,082	-		GFF4017	0.55	-1.9
4,043,082	-		GFF4017	0.55	+0.8
4,043,082	-		GFF4017	0.55	+1.0
4,043,082	-		GFF4017	0.55	-1.5
4,043,082	-		GFF4017	0.55	-0.4
4,043,082	-		GFF4017	0.55	-0.6
4,043,082	-		GFF4017	0.55	+0.0
4,043,082	-		GFF4017	0.55	+0.4
4,043,082	-		GFF4017	0.55	-2.2
4,043,082	-		GFF4017	0.55	+0.9
4,043,082	-		GFF4017	0.55	-2.4
4,043,092	+		GFF4017	0.56	-1.3
4,043,117	+		GFF4017	0.58	+0.0
4,043,117	+		GFF4017	0.58	+0.2
4,043,117	+		GFF4017	0.58	+1.8
4,043,117	+		GFF4017	0.58	-1.0
4,043,117	+		GFF4017	0.58	-2.4
4,043,117	+		GFF4017	0.58	+1.3
4,043,117	+		GFF4017	0.58	-1.4
4,043,117	+		GFF4017	0.58	+0.4
4,043,117	+		GFF4017	0.58	+0.0
4,043,117	+		GFF4017	0.58	-0.3
4,043,117	+		GFF4017	0.58	-2.0
4,043,117	+		GFF4017	0.58	+1.0
4,043,117	+		GFF4017	0.58	+0.6
4,043,117	+		GFF4017	0.58	+1.1
4,043,117	+		GFF4017	0.58	-2.4
4,043,117	+		GFF4017	0.58	-0.3
4,043,117	+		GFF4017	0.58	-0.3
4,043,117	+		GFF4017	0.58	-1.9
4,043,117	+		GFF4017	0.58	+0.2
4,043,117	+		GFF4017	0.58	+0.0
4,043,117	+		GFF4017	0.58	+0.7
4,043,117	+		GFF4017	0.58	+0.2
4,043,117	+		GFF4017	0.58	+0.1
4,043,119	+		GFF4017	0.58	+0.2
4,043,125	-		GFF4017	0.58	-1.8
4,043,125	-		GFF4017	0.58	-0.7
4,043,125	-		GFF4017	0.58	+0.8
4,043,125	-		GFF4017	0.58	-1.6
4,043,125	-		GFF4017	0.58	-1.5
4,043,125	-		GFF4017	0.58	-1.3
4,043,125	-		GFF4017	0.58	+1.5
4,043,125	-		GFF4017	0.58	-0.2
4,043,125	-		GFF4017	0.58	-1.6
4,043,125	-		GFF4017	0.58	-0.3
4,043,125	-		GFF4017	0.58	+0.0
4,043,125	-		GFF4017	0.58	-2.5
4,043,125	-		GFF4017	0.58	+0.4
4,043,125	-		GFF4017	0.58	+0.1
4,043,125	-		GFF4017	0.58	-0.4
4,043,125	-		GFF4017	0.58	-0.0
4,043,125	-		GFF4017	0.58	+0.7
4,043,125	-		GFF4017	0.58	+0.3
4,043,125	-		GFF4017	0.58	-0.8
4,043,125	-		GFF4017	0.58	-2.0
4,043,125	-		GFF4017	0.58	+0.3
4,043,125	-		GFF4017	0.58	+0.7
4,043,125	-		GFF4017	0.58	-0.3
4,043,125	-		GFF4017	0.58	+1.1
4,043,125	-		GFF4017	0.58	+1.7
4,043,125	-		GFF4017	0.58	-0.1
4,043,127	-		GFF4017	0.58	-2.9
4,043,129	+		GFF4017	0.59	-1.9
4,043,131	+		GFF4017	0.59	+0.4
4,043,131	+		GFF4017	0.59	-0.1
4,043,131	+		GFF4017	0.59	+0.1
4,043,131	+		GFF4017	0.59	+0.3
4,043,131	+		GFF4017	0.59	+0.3
4,043,131	+		GFF4017	0.59	+0.8
4,043,131	+		GFF4017	0.59	+0.2
4,043,131	+		GFF4017	0.59	-1.3
4,043,131	+		GFF4017	0.59	+0.8
4,043,131	+		GFF4017	0.59	-0.8
4,043,131	+		GFF4017	0.59	+0.9
4,043,139	-		GFF4017	0.59	-0.7
4,043,139	-		GFF4017	0.59	+1.0
4,043,139	-		GFF4017	0.59	+0.0
4,043,139	-		GFF4017	0.59	-1.4
4,043,139	-		GFF4017	0.59	-0.2
4,043,139	-		GFF4017	0.59	-2.2
4,043,139	-		GFF4017	0.59	-2.5
4,043,139	-		GFF4017	0.59	-1.3
4,043,139	-		GFF4017	0.59	+0.2
4,043,139	-		GFF4017	0.59	-0.7
4,043,139	-		GFF4017	0.59	+0.1
4,043,139	-		GFF4017	0.59	+0.5
4,043,139	-		GFF4017	0.59	+1.0
4,043,182	+		GFF4017	0.63	-1.5
4,043,189	+		GFF4017	0.63	-0.2
4,043,219	+		GFF4017	0.65	+0.9
4,043,224	+		GFF4017	0.66	-1.8
4,043,224	+		GFF4017	0.66	+0.2
4,043,227	-		GFF4017	0.66	-1.5
4,043,227	-		GFF4017	0.66	-0.8
4,043,235	+		GFF4017	0.67	-0.2
4,043,248	+		GFF4017	0.67	-1.1
4,043,251	-		GFF4017	0.68	-0.2
4,043,251	-		GFF4017	0.68	-1.1
4,043,252	-		GFF4017	0.68	-2.1
4,043,266	+		GFF4017	0.69	+0.3
4,043,278	+		GFF4017	0.70	+0.9
4,043,278	+		GFF4017	0.70	+1.0
4,043,279	+		GFF4017	0.70	+0.7
4,043,287	-		GFF4017	0.70	+0.6
4,043,289	+		GFF4017	0.71	+0.7
4,043,289	+		GFF4017	0.71	-1.4
4,043,348	+		GFF4017	0.75	-0.5
4,043,364	+		GFF4017	0.76	+0.5
4,043,364	+		GFF4017	0.76	-0.5
4,043,371	+		GFF4017	0.77	+0.2
4,043,371	+		GFF4017	0.77	-1.7
4,043,371	+		GFF4017	0.77	-0.2
4,043,379	-		GFF4017	0.77	-1.5
4,043,379	-		GFF4017	0.77	-1.9
4,043,379	-		GFF4017	0.77	-1.5
4,043,379	-		GFF4017	0.77	-0.5
4,043,390	+		GFF4017	0.78	+1.3
4,043,390	-		GFF4017	0.78	-0.3
4,043,390	-		GFF4017	0.78	+0.6
4,043,398	-		GFF4017	0.79	-0.3
4,043,398	-		GFF4017	0.79	-0.5
4,043,398	-		GFF4017	0.79	-1.6
4,043,413	+		GFF4017	0.80	-3.2
4,043,413	+		GFF4017	0.80	+0.2
4,043,413	+		GFF4017	0.80	-0.7
4,043,418	+		GFF4017	0.80	+0.2
4,043,421	-		GFF4017	0.80	+1.6
4,043,468	+		GFF4017	0.84	-0.4
4,043,473	+		GFF4017	0.84	+0.1
4,043,473	+		GFF4017	0.84	-0.2
4,043,473	+		GFF4017	0.84	+0.2
4,043,473	+		GFF4017	0.84	-0.5
4,043,476	-		GFF4017	0.85	-0.1
4,043,481	-		GFF4017	0.85	-2.3
4,043,481	-		GFF4017	0.85	+0.1
4,043,481	-		GFF4017	0.85	-0.5
4,043,481	-		GFF4017	0.85	-0.3
4,043,481	-		GFF4017	0.85	+0.1
4,043,500	-		GFF4017	0.86	-1.4
4,043,506	+		GFF4017	0.87	-0.8
4,043,525	+		GFF4017	0.88	-1.0
4,043,525	+		GFF4017	0.88	-0.9
4,043,525	+		GFF4017	0.88	-0.2
4,043,533	-		GFF4017	0.89	-0.0
4,043,533	-		GFF4017	0.89	-1.5
4,043,548	-		GFF4017	0.90	+1.0
4,043,548	-		GFF4017	0.90	-1.3
4,043,551	+				-0.6
4,043,551	+				-1.5
4,043,551	+				+0.9
4,043,554	-				-0.4
4,043,557	-				-1.7
4,043,557	-				+0.3
4,043,558	-				-0.5
4,043,559	-				+0.7
4,043,559	-				-0.6
4,043,564	-				+1.0
4,043,567	+				+0.4
4,043,586	-				+0.2
4,043,593	+				+0.2
4,043,593	+				-0.3
4,043,601	-				+0.9
4,043,627	+				-0.0
4,043,643	+				-2.2
4,043,643	+				-1.1
4,043,643	+				-1.9
4,043,643	+				+0.2
4,043,643	+				+0.1
4,043,643	+				+0.0
4,043,643	+				+0.1
4,043,643	+				-1.9
4,043,643	+				-1.3
4,043,643	+				-0.4
4,043,643	+				-0.5
4,043,643	+				+0.2
4,043,651	-				-0.2
4,043,651	-				+0.2
4,043,651	-				-0.2
4,043,651	-				-1.4
4,043,651	-				-1.6
4,043,651	-				-1.3
4,043,651	-				+1.1
4,043,651	-				+0.2
4,043,661	+				-0.2
4,043,662	+				-1.3
4,043,670	-				-0.4
4,043,670	-				+0.6
4,043,670	-				+1.4
4,043,670	-				+0.2
4,043,671	+				-0.6
4,043,674	-				-1.7
4,043,679	-				-0.3
4,043,692	-				+0.8
4,043,708	+		GFF4018	0.12	-1.2
4,043,716	-		GFF4018	0.16	-0.6
4,043,720	+		GFF4018	0.19	-0.5
4,043,725	+		GFF4018	0.21	-0.5
4,043,733	-		GFF4018	0.26	-0.4
4,043,754	+		GFF4018	0.37	-0.6
4,043,761	+		GFF4018	0.41	-0.3
4,043,766	+		GFF4018	0.44	-1.7
4,043,769	-		GFF4018	0.45	+0.3
4,043,823	+		GFF4018	0.75	+0.2
4,043,829	+		GFF4018	0.78	+0.2
4,043,829	+		GFF4018	0.78	-2.6
4,043,829	+		GFF4018	0.78	-0.3
4,043,829	+		GFF4018	0.78	-1.1
4,043,829	+		GFF4018	0.78	-1.5
4,043,831	+		GFF4018	0.79	+0.2
4,043,833	-		GFF4018	0.80	+0.0
4,043,837	-		GFF4018	0.83	+0.6
4,043,837	-		GFF4018	0.83	+0.8
4,043,837	-		GFF4018	0.83	-1.0
4,043,837	-		GFF4018	0.83	-1.0
4,043,837	-		GFF4018	0.83	-1.8
4,043,839	+		GFF4018	0.84	+0.5
4,043,863	+				-0.3
4,043,891	+				+0.6
4,043,899	-				+0.7
4,043,910	+		GFF4019	0.10	+0.4
4,043,910	-		GFF4019	0.10	+0.1
4,043,924	+		GFF4019	0.13	+0.5
4,043,924	+		GFF4019	0.13	-1.8
4,043,933	-		GFF4019	0.15	-0.1
4,043,939	+		GFF4019	0.17	-0.6
4,043,947	+		GFF4019	0.18	-0.9
4,043,947	-		GFF4019	0.18	+0.0
4,043,984	+		GFF4019	0.27	-1.3
4,043,984	+		GFF4019	0.27	+1.8
4,043,994	-		GFF4019	0.29	-1.7
4,043,996	+		GFF4019	0.29	-0.9
4,043,996	+		GFF4019	0.29	-2.3
4,043,996	+		GFF4019	0.29	+0.0
4,044,004	-		GFF4019	0.31	+0.1
4,044,004	-		GFF4019	0.31	-2.1
4,044,007	+		GFF4019	0.32	-0.9
4,044,029	-		GFF4019	0.37	-0.3
4,044,031	-		GFF4019	0.37	-1.4
4,044,038	+		GFF4019	0.39	+1.0
4,044,038	+		GFF4019	0.39	+0.5
4,044,038	+		GFF4019	0.39	+0.5
4,044,038	+		GFF4019	0.39	+0.2
4,044,038	+		GFF4019	0.39	+0.6
4,044,046	-		GFF4019	0.40	-0.6
4,044,046	-		GFF4019	0.40	-0.4
4,044,046	-		GFF4019	0.40	-0.3
4,044,046	-		GFF4019	0.40	+1.0
4,044,046	-		GFF4019	0.40	+1.3
4,044,046	-		GFF4019	0.40	-1.8
4,044,046	-		GFF4019	0.40	-0.7
4,044,046	-		GFF4019	0.40	-1.1
4,044,046	-		GFF4019	0.40	-0.7
4,044,046	-		GFF4019	0.40	-0.8
4,044,069	+		GFF4019	0.46	-0.0
4,044,069	+		GFF4019	0.46	-0.6
4,044,069	+		GFF4019	0.46	-1.8
4,044,069	+		GFF4019	0.46	-0.5
4,044,072	-		GFF4019	0.46	+1.3
4,044,072	-		GFF4019	0.46	-1.0
4,044,077	+		GFF4019	0.47	-0.2
4,044,077	+		GFF4019	0.47	+0.8
4,044,077	+		GFF4019	0.47	+0.2
4,044,077	-		GFF4019	0.47	-1.0
4,044,077	-		GFF4019	0.47	-0.3
4,044,077	-		GFF4019	0.47	+0.2
4,044,085	-		GFF4019	0.49	-0.7
4,044,085	-		GFF4019	0.49	+0.1
4,044,085	-		GFF4019	0.49	-0.0
4,044,085	-		GFF4019	0.49	+1.1
4,044,085	-		GFF4019	0.49	+0.1
4,044,097	+		GFF4019	0.52	-0.7
4,044,112	+		GFF4019	0.55	-0.2
4,044,112	+		GFF4019	0.55	+1.2
4,044,112	+		GFF4019	0.55	+0.9
4,044,112	+		GFF4019	0.55	+0.4
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