Strain Fitness in Sphingobium sp. HT1-2 around GFF3916

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
3,953,506	+		GFF3915	0.49	-1.7
3,953,526	+		GFF3915	0.50	-1.4
3,953,531	+		GFF3915	0.51	+0.3
3,953,531	+		GFF3915	0.51	-0.4
3,953,534	-		GFF3915	0.51	-1.3
3,953,534	-		GFF3915	0.51	-1.7
3,953,539	-		GFF3915	0.51	+0.1
3,953,552	-		GFF3915	0.52	-1.6
3,953,573	-		GFF3915	0.53	-0.1
3,953,583	-		GFF3915	0.54	+0.6
3,953,618	+		GFF3915	0.56	-0.3
3,953,619	+		GFF3915	0.56	-0.1
3,953,627	-		GFF3915	0.56	+0.8
3,953,642	+		GFF3915	0.57	-0.2
3,953,642	+		GFF3915	0.57	-1.3
3,953,647	+		GFF3915	0.57	-0.3
3,953,650	-		GFF3915	0.57	+0.1
3,953,652	+		GFF3915	0.58	-1.6
3,953,655	-		GFF3915	0.58	-0.8
3,953,660	-		GFF3915	0.58	+1.3
3,953,660	-		GFF3915	0.58	-1.8
3,953,660	-		GFF3915	0.58	-0.1
3,953,660	-		GFF3915	0.58	+1.4
3,953,733	-		GFF3915	0.62	-1.0
3,953,733	-		GFF3915	0.62	-0.6
3,953,750	+		GFF3915	0.63	+0.3
3,953,766	-		GFF3915	0.64	-0.8
3,953,775	+		GFF3915	0.64	+0.2
3,953,803	-		GFF3915	0.66	+0.7
3,953,837	+		GFF3915	0.68	-0.7
3,953,861	+		GFF3915	0.69	-2.0
3,953,864	-		GFF3915	0.69	-0.6
3,953,869	-		GFF3915	0.70	+0.9
3,953,869	-		GFF3915	0.70	-0.3
3,953,882	-		GFF3915	0.71	-0.5
3,953,886	-		GFF3915	0.71	+0.3
3,953,892	-		GFF3915	0.71	-0.6
3,953,898	+		GFF3915	0.71	-0.7
3,953,906	-		GFF3915	0.72	-0.5
3,953,912	+		GFF3915	0.72	-0.0
3,953,919	+		GFF3915	0.73	-0.2
3,953,972	-		GFF3915	0.76	-0.8
3,953,983	+		GFF3915	0.76	-0.7
3,953,983	+		GFF3915	0.76	-0.2
3,953,991	-		GFF3915	0.77	+0.3
3,953,993	+		GFF3915	0.77	+1.1
3,953,998	+		GFF3915	0.77	+0.5
3,954,012	+		GFF3915	0.78	-0.5
3,954,015	-		GFF3915	0.78	-0.9
3,954,020	-		GFF3915	0.78	-0.5
3,954,022	-		GFF3915	0.78	-1.1
3,954,022	-		GFF3915	0.78	-0.1
3,954,037	-		GFF3915	0.79	+0.4
3,954,037	-		GFF3915	0.79	-1.4
3,954,037	-		GFF3915	0.79	+0.2
3,954,037	-		GFF3915	0.79	-2.1
3,954,075	+		GFF3915	0.81	+0.4
3,954,079	+		GFF3915	0.82	-0.7
3,954,079	+		GFF3915	0.82	+0.4
3,954,079	+		GFF3915	0.82	+0.6
3,954,079	+		GFF3915	0.82	-0.9
3,954,079	+		GFF3915	0.82	+0.3
3,954,079	+		GFF3915	0.82	-1.3
3,954,087	-		GFF3915	0.82	-0.9
3,954,087	-		GFF3915	0.82	+0.9
3,954,087	-		GFF3915	0.82	-0.7
3,954,114	+		GFF3915	0.84	+1.3
3,954,117	-		GFF3915	0.84	-2.9
3,954,141	-		GFF3915	0.85	+0.8
3,954,143	+		GFF3915	0.85	-0.3
3,954,151	-		GFF3915	0.86	-0.5
3,954,155	+		GFF3915	0.86	+0.1
3,954,163	+		GFF3915	0.86	+0.0
3,954,247	+				-2.9
3,954,247	+				-0.4
3,954,247	+				-1.4
3,954,250	-				-1.7
3,954,255	-				+1.1
3,954,255	-				+0.3
3,954,255	-				+0.3
3,954,255	-				+0.9
3,954,267	+				-0.4
3,954,267	+				+0.7
3,954,267	-				-0.4
3,954,267	-				+0.4
3,954,272	+				-0.5
3,954,278	+				-0.0
3,954,280	-				+0.6
3,954,285	-				-0.1
3,954,305	-				+1.2
3,954,351	-				-0.7
3,954,351	-				+0.3
3,954,351	-				+0.9
3,954,361	+				-0.9
3,954,371	-				-0.7
3,954,371	-				-0.1
3,954,378	+				+1.6
3,954,393	-				-0.1
3,954,399	+				-0.9
3,954,405	+				+0.1
3,954,406	+				-0.3
3,954,414	-				-0.0
3,954,453	-				+0.2
3,954,471	-				-1.3
3,954,488	-				+0.2
3,954,516	+				+0.2
3,954,529	+				-2.9
3,954,529	+				+0.2
3,954,529	+				+0.0
3,954,529	+				-1.8
3,954,529	+				-1.4
3,954,529	+				+0.5
3,954,533	-				-0.1
3,954,537	-				-0.1
3,954,537	-				-0.8
3,954,537	-				-0.7
3,954,537	-				-1.8
3,954,584	-				+0.5
3,954,598	-		GFF3916	0.11	-1.7
3,954,602	+		GFF3916	0.12	+0.2
3,954,610	-		GFF3916	0.12	-0.1
3,954,610	-		GFF3916	0.12	-0.3
3,954,633	-		GFF3916	0.15	-1.1
3,954,657	-		GFF3916	0.17	+0.1
3,954,692	-		GFF3916	0.21	-0.2
3,954,697	-		GFF3916	0.21	+1.3
3,954,699	-		GFF3916	0.21	-1.1
3,954,745	+		GFF3916	0.26	+0.4
3,954,771	+		GFF3916	0.28	-0.3
3,954,771	+		GFF3916	0.28	+0.1
3,954,771	-		GFF3916	0.28	-0.3
3,954,779	+		GFF3916	0.29	+0.2
3,954,779	-		GFF3916	0.29	+1.9
3,954,809	+		GFF3916	0.32	-1.1
3,954,809	+		GFF3916	0.32	-0.5
3,954,809	+		GFF3916	0.32	-0.4
3,954,814	+		GFF3916	0.33	-0.6
3,954,816	+		GFF3916	0.33	-0.6
3,954,817	-		GFF3916	0.33	-0.7
3,954,818	+		GFF3916	0.33	-0.0
3,954,824	-		GFF3916	0.34	-1.8
3,954,824	-		GFF3916	0.34	-0.9
3,954,853	+		GFF3916	0.36	-0.4
3,954,853	+		GFF3916	0.36	-3.0
3,954,853	+		GFF3916	0.36	-0.5
3,954,853	+		GFF3916	0.36	+1.2
3,954,853	+		GFF3916	0.36	-0.3
3,954,853	+		GFF3916	0.36	-1.0
3,954,853	+		GFF3916	0.36	+1.1
3,954,853	+		GFF3916	0.36	-0.3
3,954,853	+		GFF3916	0.36	+0.1
3,954,853	+		GFF3916	0.36	-1.3
3,954,853	+		GFF3916	0.36	-1.4
3,954,853	+		GFF3916	0.36	-0.3
3,954,853	+		GFF3916	0.36	+0.1
3,954,853	+		GFF3916	0.36	-0.4
3,954,853	+		GFF3916	0.36	-1.7
3,954,853	+		GFF3916	0.36	+0.6
3,954,853	+		GFF3916	0.36	-0.2
3,954,853	+		GFF3916	0.36	-0.4
3,954,853	+		GFF3916	0.36	+0.3
3,954,853	+		GFF3916	0.36	-0.2
3,954,853	+		GFF3916	0.36	+0.2
3,954,853	+		GFF3916	0.36	-1.2
3,954,853	+		GFF3916	0.36	+0.3
3,954,853	+		GFF3916	0.36	-1.5
3,954,853	+		GFF3916	0.36	+0.8
3,954,853	+		GFF3916	0.36	+0.9
3,954,853	+		GFF3916	0.36	-0.3
3,954,853	+		GFF3916	0.36	-1.2
3,954,853	+		GFF3916	0.36	-0.4
3,954,853	+		GFF3916	0.36	-0.7
3,954,853	+		GFF3916	0.36	+0.8
3,954,861	-		GFF3916	0.37	-0.1
3,954,861	-		GFF3916	0.37	-0.5
3,954,861	-		GFF3916	0.37	-0.2
3,954,861	-		GFF3916	0.37	-0.3
3,954,861	-		GFF3916	0.37	-0.8
3,954,861	-		GFF3916	0.37	+0.8
3,954,861	-		GFF3916	0.37	-1.8
3,954,861	-		GFF3916	0.37	-0.7
3,954,861	-		GFF3916	0.37	+1.1
3,954,861	-		GFF3916	0.37	-1.8
3,954,861	-		GFF3916	0.37	-1.8
3,954,861	-		GFF3916	0.37	-2.5
3,954,861	-		GFF3916	0.37	-0.3
3,954,861	-		GFF3916	0.37	-0.5
3,954,861	-		GFF3916	0.37	+0.1
3,954,861	-		GFF3916	0.37	+0.2
3,954,861	-		GFF3916	0.37	+0.2
3,954,861	-		GFF3916	0.37	-0.4
3,954,861	-		GFF3916	0.37	+0.1
3,954,861	-		GFF3916	0.37	+0.3
3,954,861	-		GFF3916	0.37	-1.0
3,954,861	-		GFF3916	0.37	-0.0
3,954,861	-		GFF3916	0.37	-2.4
3,954,861	-		GFF3916	0.37	-1.5
3,954,861	-		GFF3916	0.37	+1.1
3,954,861	-		GFF3916	0.37	-2.4
3,954,861	-		GFF3916	0.37	-0.3
3,954,863	+		GFF3916	0.37	-0.2
3,954,863	+		GFF3916	0.37	-1.1
3,954,864	+		GFF3916	0.37	+0.3
3,954,871	-		GFF3916	0.38	+1.0
3,954,871	-		GFF3916	0.38	-0.7
3,954,888	+		GFF3916	0.40	+0.6
3,954,913	+		GFF3916	0.42	+1.4
3,954,913	+		GFF3916	0.42	-1.3
3,954,920	+		GFF3916	0.43	-2.9
3,954,920	+		GFF3916	0.43	-1.9
3,954,920	+		GFF3916	0.43	-0.1
3,954,920	+		GFF3916	0.43	-0.8
3,954,920	+		GFF3916	0.43	+0.1
3,954,920	+		GFF3916	0.43	-1.0
3,954,921	-		GFF3916	0.43	-1.5
3,954,928	-		GFF3916	0.44	+0.2
3,954,928	-		GFF3916	0.44	+0.5
3,954,928	-		GFF3916	0.44	-0.6
3,954,928	-		GFF3916	0.44	-0.3
3,954,928	-		GFF3916	0.44	+0.5
3,954,928	-		GFF3916	0.44	-0.3
3,954,928	-		GFF3916	0.44	+0.2
3,954,928	-		GFF3916	0.44	+0.7
3,954,928	-		GFF3916	0.44	-1.0
3,954,935	+		GFF3916	0.44	-0.6
3,954,946	+		GFF3916	0.46	-2.4
3,954,954	-		GFF3916	0.46	-0.6
3,954,983	+		GFF3916	0.49	-1.6
3,954,983	+		GFF3916	0.49	-0.6
3,954,983	+		GFF3916	0.49	-0.8
3,954,993	+		GFF3916	0.50	-0.7
3,954,993	+		GFF3916	0.50	-0.0
3,954,993	+		GFF3916	0.50	+0.1
3,954,993	+		GFF3916	0.50	-0.9
3,954,993	+		GFF3916	0.50	-1.1
3,954,993	+		GFF3916	0.50	-0.3
3,954,993	+		GFF3916	0.50	-0.6
3,955,000	-		GFF3916	0.51	-1.9
3,955,001	-		GFF3916	0.51	-0.4
3,955,001	-		GFF3916	0.51	+0.6
3,955,001	-		GFF3916	0.51	+0.1
3,955,001	-		GFF3916	0.51	-1.3
3,955,001	-		GFF3916	0.51	+1.5
3,955,001	-		GFF3916	0.51	-1.3
3,955,006	+		GFF3916	0.51	-0.4
3,955,006	+		GFF3916	0.51	-0.3
3,955,006	+		GFF3916	0.51	-1.1
3,955,006	+		GFF3916	0.51	-1.1
3,955,006	+		GFF3916	0.51	-0.7
3,955,006	+		GFF3916	0.51	-2.2
3,955,006	+		GFF3916	0.51	-1.0
3,955,006	+		GFF3916	0.51	+0.8
3,955,006	+		GFF3916	0.51	-1.9
3,955,006	+		GFF3916	0.51	+0.7
3,955,006	+		GFF3916	0.51	+0.3
3,955,006	+		GFF3916	0.51	-1.0
3,955,006	+		GFF3916	0.51	-0.5
3,955,006	+		GFF3916	0.51	-0.2
3,955,006	+		GFF3916	0.51	-1.5
3,955,006	+		GFF3916	0.51	+0.3
3,955,006	+		GFF3916	0.51	+0.7
3,955,006	+		GFF3916	0.51	+1.0
3,955,014	-		GFF3916	0.52	-0.4
3,955,014	-		GFF3916	0.52	-1.4
3,955,014	-		GFF3916	0.52	+0.5
3,955,014	-		GFF3916	0.52	-0.5
3,955,014	-		GFF3916	0.52	-0.1
3,955,014	-		GFF3916	0.52	+0.1
3,955,014	-		GFF3916	0.52	-1.0
3,955,014	-		GFF3916	0.52	-1.1
3,955,014	-		GFF3916	0.52	-2.0
3,955,014	-		GFF3916	0.52	+0.5
3,955,014	-		GFF3916	0.52	-0.4
3,955,014	-		GFF3916	0.52	-0.5
3,955,014	-		GFF3916	0.52	+0.5
3,955,014	-		GFF3916	0.52	+0.0
3,955,014	-		GFF3916	0.52	+0.2
3,955,014	-		GFF3916	0.52	+0.3
3,955,014	-		GFF3916	0.52	-0.0
3,955,014	-		GFF3916	0.52	+0.4
3,955,014	-		GFF3916	0.52	+0.1
3,955,014	-		GFF3916	0.52	-0.2
3,955,014	-		GFF3916	0.52	-2.3
3,955,014	-		GFF3916	0.52	-1.9
3,955,014	-		GFF3916	0.52	+0.8
3,955,014	-		GFF3916	0.52	+0.3
3,955,024	-		GFF3916	0.53	+1.5
3,955,041	-		GFF3916	0.55	+0.0
3,955,047	+		GFF3916	0.55	+0.5
3,955,047	+		GFF3916	0.55	-0.4
3,955,055	+		GFF3916	0.56	-0.9
3,955,060	+		GFF3916	0.57	-2.1
3,955,061	-		GFF3916	0.57	+0.1
3,955,064	+		GFF3916	0.57	+1.3
3,955,089	-		GFF3916	0.60	+0.8
3,955,101	+		GFF3916	0.61	+0.3
3,955,109	-		GFF3916	0.62	+0.6
3,955,113	+		GFF3916	0.62	-0.3
3,955,113	+		GFF3916	0.62	-1.1
3,955,121	-		GFF3916	0.63	-0.6
3,955,134	+		GFF3916	0.64	-1.2
3,955,135	+		GFF3916	0.64	+0.2
3,955,135	+		GFF3916	0.64	+0.9
3,955,135	+		GFF3916	0.64	-0.8
3,955,135	+		GFF3916	0.64	-0.4
3,955,143	-		GFF3916	0.65	-0.1
3,955,143	-		GFF3916	0.65	-0.1
3,955,143	-		GFF3916	0.65	-1.7
3,955,143	-		GFF3916	0.65	-2.1
3,955,143	-		GFF3916	0.65	-0.8
3,955,143	-		GFF3916	0.65	+0.6
3,955,148	-		GFF3916	0.65	-1.1
3,955,167	+		GFF3916	0.67	-0.3
3,955,183	+		GFF3916	0.69	-0.3
3,955,183	+		GFF3916	0.69	-0.0
3,955,183	+		GFF3916	0.69	-2.2
3,955,183	+		GFF3916	0.69	+0.9
3,955,183	+		GFF3916	0.69	+0.6
3,955,183	+		GFF3916	0.69	+1.3
3,955,183	+		GFF3916	0.69	+0.8
3,955,183	+		GFF3916	0.69	+0.1
3,955,183	+		GFF3916	0.69	-1.3
3,955,183	+		GFF3916	0.69	-0.2
3,955,183	+		GFF3916	0.69	+0.1
3,955,189	-		GFF3916	0.69	+0.5
3,955,191	-		GFF3916	0.70	+0.3
3,955,191	-		GFF3916	0.70	-0.5
3,955,191	-		GFF3916	0.70	-1.3
3,955,191	-		GFF3916	0.70	+0.6
3,955,191	-		GFF3916	0.70	+1.1
3,955,191	-		GFF3916	0.70	-0.5
3,955,191	-		GFF3916	0.70	+0.8
3,955,191	-		GFF3916	0.70	+0.5
3,955,191	-		GFF3916	0.70	-2.3
3,955,217	+		GFF3916	0.72	+0.0
3,955,217	+		GFF3916	0.72	-0.4
3,955,222	+		GFF3916	0.73	-0.9
3,955,222	+		GFF3916	0.73	-0.2
3,955,222	+		GFF3916	0.73	+0.3
3,955,222	+		GFF3916	0.73	-0.7
3,955,222	+		GFF3916	0.73	-0.0
3,955,222	+		GFF3916	0.73	-0.3
3,955,227	+		GFF3916	0.73	-0.3
3,955,227	+		GFF3916	0.73	-0.1
3,955,227	+		GFF3916	0.73	-0.2
3,955,230	-		GFF3916	0.73	-0.5
3,955,230	-		GFF3916	0.73	-0.2
3,955,230	-		GFF3916	0.73	+0.8
3,955,230	-		GFF3916	0.73	-0.8
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