Strain Fitness in Sphingobium sp. HT1-2 around GFF3260

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
3,315,019	+		GFF3259	0.15	+0.2
3,315,019	+		GFF3259	0.15	-2.8
3,315,024	+		GFF3259	0.16	-1.5
3,315,024	+		GFF3259	0.16	+0.1
3,315,024	+		GFF3259	0.16	+1.2
3,315,024	+		GFF3259	0.16	+0.6
3,315,024	+		GFF3259	0.16	+0.4
3,315,024	+		GFF3259	0.16	-0.6
3,315,024	+		GFF3259	0.16	+0.2
3,315,024	+		GFF3259	0.16	+0.4
3,315,024	+		GFF3259	0.16	-1.2
3,315,024	+		GFF3259	0.16	-0.6
3,315,027	-		GFF3259	0.16	-1.4
3,315,027	-		GFF3259	0.16	-1.5
3,315,032	-		GFF3259	0.16	-0.5
3,315,032	-		GFF3259	0.16	-0.8
3,315,032	-		GFF3259	0.16	+0.4
3,315,032	-		GFF3259	0.16	-0.7
3,315,032	-		GFF3259	0.16	-0.2
3,315,032	-		GFF3259	0.16	-0.5
3,315,032	-		GFF3259	0.16	-0.6
3,315,039	-		GFF3259	0.17	+0.2
3,315,043	-		GFF3259	0.17	-1.9
3,315,045	+		GFF3259	0.17	+1.5
3,315,052	+		GFF3259	0.18	-0.4
3,315,053	-		GFF3259	0.18	-0.9
3,315,053	-		GFF3259	0.18	-2.4
3,315,060	-		GFF3259	0.19	+0.9
3,315,060	-		GFF3259	0.19	-1.3
3,315,060	-		GFF3259	0.19	-0.7
3,315,065	-		GFF3259	0.19	+1.0
3,315,070	+		GFF3259	0.20	-0.5
3,315,078	-		GFF3259	0.21	+1.1
3,315,078	-		GFF3259	0.21	+0.6
3,315,078	-		GFF3259	0.21	-0.0
3,315,078	-		GFF3259	0.21	+1.6
3,315,094	-		GFF3259	0.22	-1.3
3,315,098	+		GFF3259	0.22	+0.3
3,315,147	+		GFF3259	0.27	-2.7
3,315,150	-		GFF3259	0.27	+0.2
3,315,158	+		GFF3259	0.28	-1.7
3,315,168	+		GFF3259	0.29	-0.2
3,315,168	+		GFF3259	0.29	-0.2
3,315,168	+		GFF3259	0.29	+0.3
3,315,176	-		GFF3259	0.29	+0.6
3,315,176	-		GFF3259	0.29	+0.4
3,315,193	+		GFF3259	0.31	-0.1
3,315,201	-		GFF3259	0.32	-0.4
3,315,230	+		GFF3259	0.34	-0.3
3,315,230	+		GFF3259	0.34	-0.9
3,315,240	+		GFF3259	0.35	-1.0
3,315,254	-		GFF3259	0.37	-1.8
3,315,260	-		GFF3259	0.37	-0.1
3,315,316	-		GFF3259	0.42	+0.4
3,315,318	+		GFF3259	0.42	-0.8
3,315,331	+		GFF3259	0.44	-2.2
3,315,362	+		GFF3259	0.47	-1.2
3,315,399	+		GFF3259	0.50	-1.3
3,315,433	+		GFF3259	0.53	+0.7
3,315,433	+		GFF3259	0.53	+0.6
3,315,433	+		GFF3259	0.53	+1.2
3,315,433	+		GFF3259	0.53	-0.4
3,315,433	+		GFF3259	0.53	-2.0
3,315,433	+		GFF3259	0.53	+0.0
3,315,433	+		GFF3259	0.53	-0.3
3,315,433	+		GFF3259	0.53	+0.2
3,315,433	+		GFF3259	0.53	-0.2
3,315,433	+		GFF3259	0.53	-2.1
3,315,433	+		GFF3259	0.53	+0.6
3,315,433	+		GFF3259	0.53	+0.0
3,315,433	+		GFF3259	0.53	-1.4
3,315,441	-		GFF3259	0.54	+0.8
3,315,441	-		GFF3259	0.54	-0.9
3,315,441	-		GFF3259	0.54	+0.7
3,315,441	-		GFF3259	0.54	-2.2
3,315,441	-		GFF3259	0.54	-0.6
3,315,441	-		GFF3259	0.54	-1.4
3,315,441	-		GFF3259	0.54	+0.5
3,315,467	+		GFF3259	0.56	-0.2
3,315,485	-		GFF3259	0.58	-1.1
3,315,527	+		GFF3259	0.62	-0.9
3,315,535	+		GFF3259	0.62	-0.3
3,315,536	+		GFF3259	0.62	+0.3
3,315,536	+		GFF3259	0.62	+0.3
3,315,536	+		GFF3259	0.62	-0.6
3,315,543	-		GFF3259	0.63	-1.1
3,315,544	-		GFF3259	0.63	-0.7
3,315,544	-		GFF3259	0.63	-0.6
3,315,544	-		GFF3259	0.63	-0.2
3,315,544	-		GFF3259	0.63	-0.4
3,315,547	+		GFF3259	0.63	+0.1
3,315,559	+		GFF3259	0.65	+1.1
3,315,559	+		GFF3259	0.65	-0.6
3,315,562	-		GFF3259	0.65	-1.9
3,315,567	-		GFF3259	0.65	+0.3
3,315,567	-		GFF3259	0.65	+0.3
3,315,600	-		GFF3259	0.68	+0.7
3,315,637	+		GFF3259	0.72	-1.6
3,315,644	+		GFF3259	0.72	-0.5
3,315,647	-		GFF3259	0.73	+0.2
3,315,647	-		GFF3259	0.73	-1.1
3,315,647	-		GFF3259	0.73	-1.9
3,315,652	-		GFF3259	0.73	+1.2
3,315,671	+		GFF3259	0.75	-0.5
3,315,676	+		GFF3259	0.75	-2.1
3,315,684	-		GFF3259	0.76	+0.8
3,315,684	-		GFF3259	0.76	-0.7
3,315,686	+		GFF3259	0.76	-0.4
3,315,694	-		GFF3259	0.77	-2.1
3,315,694	-		GFF3259	0.77	-0.5
3,315,720	+		GFF3259	0.79	-1.4
3,315,720	+		GFF3259	0.79	+0.7
3,315,725	+		GFF3259	0.80	-1.0
3,315,725	-		GFF3259	0.80	-1.7
3,315,733	-		GFF3259	0.80	-1.1
3,315,735	-		GFF3259	0.81	+0.6
3,315,738	+		GFF3259	0.81	+0.5
3,315,740	+		GFF3259	0.81	-0.7
3,315,746	+		GFF3259	0.82	+0.8
3,315,746	+		GFF3259	0.82	-1.6
3,315,746	+		GFF3259	0.82	+0.7
3,315,746	+		GFF3259	0.82	+0.0
3,315,746	-		GFF3259	0.82	+0.6
3,315,746	-		GFF3259	0.82	+0.6
3,315,748	-		GFF3259	0.82	-2.2
3,315,748	-		GFF3259	0.82	+0.3
3,315,749	-		GFF3259	0.82	-1.6
3,315,751	+		GFF3259	0.82	-1.6
3,315,751	+		GFF3259	0.82	+0.0
3,315,751	+		GFF3259	0.82	+1.5
3,315,751	+		GFF3259	0.82	-0.5
3,315,751	+		GFF3259	0.82	-0.6
3,315,751	+		GFF3259	0.82	-0.5
3,315,751	+		GFF3259	0.82	-1.1
3,315,754	-		GFF3259	0.82	-0.9
3,315,759	-		GFF3259	0.83	-0.7
3,315,759	-		GFF3259	0.83	+0.5
3,315,759	-		GFF3259	0.83	+0.2
3,315,759	-		GFF3259	0.83	-1.1
3,315,759	-		GFF3259	0.83	+0.5
3,315,759	-		GFF3259	0.83	+0.1
3,315,759	-		GFF3259	0.83	+0.5
3,315,759	-		GFF3259	0.83	-0.5
3,315,838	+				+0.6
3,315,851	-				-0.0
3,315,872	-				+1.1
3,315,904	+				-2.1
3,315,919	-				-0.5
3,315,963	-				+0.3
3,316,027	+				+0.8
3,316,029	-				-1.0
3,316,035	-				+0.8
3,316,068	+				-0.4
3,316,073	+				+0.3
3,316,073	+				-0.5
3,316,076	-				-0.7
3,316,107	+		GFF3260	0.11	+0.2
3,316,115	-		GFF3260	0.11	-1.6
3,316,117	+		GFF3260	0.12	-0.6
3,316,119	-		GFF3260	0.12	-0.6
3,316,119	-		GFF3260	0.12	+0.3
3,316,119	-		GFF3260	0.12	+1.0
3,316,167	+		GFF3260	0.17	+0.8
3,316,175	-		GFF3260	0.18	-1.2
3,316,175	-		GFF3260	0.18	-0.3
3,316,195	+		GFF3260	0.21	-0.6
3,316,195	+		GFF3260	0.21	+0.9
3,316,195	+		GFF3260	0.21	+0.6
3,316,195	+		GFF3260	0.21	+0.4
3,316,203	-		GFF3260	0.21	-0.3
3,316,258	-		GFF3260	0.28	+0.8
3,316,261	+		GFF3260	0.28	+1.7
3,316,282	+		GFF3260	0.30	-1.0
3,316,290	-		GFF3260	0.31	-2.5
3,316,295	-		GFF3260	0.32	-1.6
3,316,295	-		GFF3260	0.32	-0.4
3,316,300	+		GFF3260	0.32	+0.7
3,316,318	+		GFF3260	0.34	-0.9
3,316,318	+		GFF3260	0.34	-0.6
3,316,318	+		GFF3260	0.34	-0.3
3,316,318	+		GFF3260	0.34	-0.3
3,316,321	-		GFF3260	0.35	-1.5
3,316,345	+		GFF3260	0.38	+0.2
3,316,358	+		GFF3260	0.39	+0.7
3,316,398	+		GFF3260	0.44	+0.4
3,316,406	-		GFF3260	0.44	-1.1
3,316,423	-		GFF3260	0.46	+0.6
3,316,448	+		GFF3260	0.49	+1.6
3,316,451	-		GFF3260	0.50	-1.6
3,316,456	+		GFF3260	0.50	-0.2
3,316,456	+		GFF3260	0.50	-0.2
3,316,456	+		GFF3260	0.50	-0.5
3,316,456	+		GFF3260	0.50	-0.0
3,316,456	+		GFF3260	0.50	-0.6
3,316,456	+		GFF3260	0.50	-0.8
3,316,456	+		GFF3260	0.50	-0.9
3,316,456	+		GFF3260	0.50	-1.5
3,316,456	+		GFF3260	0.50	+0.3
3,316,456	+		GFF3260	0.50	-1.4
3,316,456	+		GFF3260	0.50	-0.4
3,316,456	+		GFF3260	0.50	-0.1
3,316,461	+		GFF3260	0.51	-1.7
3,316,461	+		GFF3260	0.51	+0.0
3,316,461	+		GFF3260	0.51	-1.4
3,316,464	-		GFF3260	0.51	-0.2
3,316,464	-		GFF3260	0.51	+0.3
3,316,464	-		GFF3260	0.51	+0.4
3,316,464	-		GFF3260	0.51	+0.8
3,316,464	-		GFF3260	0.51	-2.4
3,316,464	-		GFF3260	0.51	-1.5
3,316,464	-		GFF3260	0.51	-0.2
3,316,464	-		GFF3260	0.51	+0.3
3,316,464	-		GFF3260	0.51	+0.1
3,316,464	-		GFF3260	0.51	-0.8
3,316,464	-		GFF3260	0.51	-1.2
3,316,466	+		GFF3260	0.51	+0.3
3,316,469	-		GFF3260	0.52	-0.3
3,316,474	-		GFF3260	0.52	+0.5
3,316,478	+		GFF3260	0.53	-0.8
3,316,478	+		GFF3260	0.53	-0.2
3,316,478	+		GFF3260	0.53	+0.4
3,316,478	+		GFF3260	0.53	-0.8
3,316,478	+		GFF3260	0.53	-1.5
3,316,478	+		GFF3260	0.53	-1.6
3,316,486	-		GFF3260	0.54	-0.5
3,316,486	-		GFF3260	0.54	-0.5
3,316,486	-		GFF3260	0.54	-0.3
3,316,486	-		GFF3260	0.54	+0.9
3,316,486	-		GFF3260	0.54	-0.9
3,316,486	-		GFF3260	0.54	-0.9
3,316,488	+		GFF3260	0.54	+0.1
3,316,492	+		GFF3260	0.54	-0.2
3,316,493	+		GFF3260	0.54	-0.4
3,316,493	+		GFF3260	0.54	-0.8
3,316,500	-		GFF3260	0.55	+0.3
3,316,501	-		GFF3260	0.55	-1.0
3,316,514	+		GFF3260	0.57	+0.4
3,316,514	+		GFF3260	0.57	-1.5
3,316,514	+		GFF3260	0.57	+0.3
3,316,514	+		GFF3260	0.57	+0.2
3,316,514	+		GFF3260	0.57	-1.2
3,316,514	+		GFF3260	0.57	-1.4
3,316,514	+		GFF3260	0.57	+0.7
3,316,514	+		GFF3260	0.57	-0.6
3,316,514	+		GFF3260	0.57	-0.6
3,316,514	+		GFF3260	0.57	-0.2
3,316,514	+		GFF3260	0.57	+0.7
3,316,514	+		GFF3260	0.57	-0.5
3,316,514	+		GFF3260	0.57	-1.5
3,316,514	+		GFF3260	0.57	+0.3
3,316,514	+		GFF3260	0.57	-2.3
3,316,514	+		GFF3260	0.57	-1.6
3,316,522	-		GFF3260	0.58	+0.7
3,316,522	-		GFF3260	0.58	-0.9
3,316,522	-		GFF3260	0.58	-1.5
3,316,522	-		GFF3260	0.58	-1.4
3,316,522	-		GFF3260	0.58	+1.9
3,316,522	-		GFF3260	0.58	-0.6
3,316,522	-		GFF3260	0.58	-0.3
3,316,522	-		GFF3260	0.58	-1.8
3,316,522	-		GFF3260	0.58	+0.2
3,316,522	-		GFF3260	0.58	-1.0
3,316,522	-		GFF3260	0.58	-1.9
3,316,522	-		GFF3260	0.58	-1.9
3,316,522	-		GFF3260	0.58	-0.2
3,316,522	-		GFF3260	0.58	-2.5
3,316,522	-		GFF3260	0.58	-0.8
3,316,522	-		GFF3260	0.58	+0.8
3,316,522	-		GFF3260	0.58	+0.4
3,316,522	-		GFF3260	0.58	+0.4
3,316,522	-		GFF3260	0.58	-0.2
3,316,522	-		GFF3260	0.58	+0.1
3,316,522	-		GFF3260	0.58	+0.2
3,316,522	-		GFF3260	0.58	-0.6
3,316,522	-		GFF3260	0.58	-0.5
3,316,522	-		GFF3260	0.58	-0.6
3,316,522	-		GFF3260	0.58	-0.9
3,316,522	-		GFF3260	0.58	+0.9
3,316,525	+		GFF3260	0.58	-1.4
3,316,526	-		GFF3260	0.58	+0.8
3,316,528	+		GFF3260	0.58	-0.6
3,316,528	+		GFF3260	0.58	+0.2
3,316,536	-		GFF3260	0.59	-2.0
3,316,538	+		GFF3260	0.59	+0.3
3,316,538	+		GFF3260	0.59	-1.8
3,316,546	-		GFF3260	0.60	+0.4
3,316,546	-		GFF3260	0.60	-1.2
3,316,559	+		GFF3260	0.62	+0.9
3,316,565	-		GFF3260	0.62	-0.8
3,316,592	-		GFF3260	0.66	-0.1
3,316,596	+		GFF3260	0.66	-0.3
3,316,596	+		GFF3260	0.66	+0.4
3,316,604	-		GFF3260	0.67	-1.1
3,316,604	-		GFF3260	0.67	-0.5
3,316,604	-		GFF3260	0.67	+1.4
3,316,604	-		GFF3260	0.67	+0.9
3,316,604	-		GFF3260	0.67	-1.4
3,316,650	+		GFF3260	0.72	-0.4
3,316,655	+		GFF3260	0.73	+0.7
3,316,655	+		GFF3260	0.73	-1.7
3,316,655	+		GFF3260	0.73	-0.1
3,316,655	+		GFF3260	0.73	+0.4
3,316,655	+		GFF3260	0.73	-0.5
3,316,655	+		GFF3260	0.73	+0.4
3,316,655	+		GFF3260	0.73	-0.3
3,316,655	+		GFF3260	0.73	-2.6
3,316,655	+		GFF3260	0.73	-0.1
3,316,655	+		GFF3260	0.73	-0.3
3,316,655	+		GFF3260	0.73	-0.4
3,316,663	-		GFF3260	0.74	-0.4
3,316,663	-		GFF3260	0.74	+1.0
3,316,663	-		GFF3260	0.74	+0.4
3,316,663	-		GFF3260	0.74	-1.9
3,316,663	-		GFF3260	0.74	+0.0
3,316,663	-		GFF3260	0.74	+0.9
3,316,663	-		GFF3260	0.74	-1.1
3,316,663	-		GFF3260	0.74	-0.3
3,316,665	+		GFF3260	0.74	-1.6
3,316,675	+		GFF3260	0.75	-1.0
3,316,675	+		GFF3260	0.75	-0.0
3,316,683	-		GFF3260	0.76	-0.6
3,316,683	-		GFF3260	0.76	+0.8
3,316,683	-		GFF3260	0.76	+0.1
3,316,683	-		GFF3260	0.76	-0.4
3,316,683	-		GFF3260	0.76	+0.9
3,316,685	+		GFF3260	0.76	-1.1
3,316,702	+		GFF3260	0.78	-0.1
3,316,710	+		GFF3260	0.79	-0.5
3,316,710	-		GFF3260	0.79	-0.4
3,316,712	+		GFF3260	0.79	-0.0
3,316,717	+		GFF3260	0.80	-0.7
3,316,717	+		GFF3260	0.80	-1.6
3,316,718	-		GFF3260	0.80	-1.8
3,316,718	-		GFF3260	0.80	+0.6
3,316,725	-		GFF3260	0.81	+0.1
3,316,725	-		GFF3260	0.81	-0.5
3,316,725	-		GFF3260	0.81	+0.6
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