Strain Fitness in Sphingobium sp. HT1-2 around GFF2996

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
3,053,630	+		GFF2995	0.25	+1.1
3,053,630	+		GFF2995	0.25	-1.4
3,053,630	+		GFF2995	0.25	+0.1
3,053,631	-		GFF2995	0.25	-1.7
3,053,631	-		GFF2995	0.25	+0.4
3,053,631	-		GFF2995	0.25	-1.4
3,053,636	-		GFF2995	0.25	-1.3
3,053,638	-		GFF2995	0.26	-0.4
3,053,669	+		GFF2995	0.28	-1.5
3,053,669	+		GFF2995	0.28	+0.8
3,053,669	+		GFF2995	0.28	-0.5
3,053,674	+		GFF2995	0.29	-0.5
3,053,674	+		GFF2995	0.29	-0.6
3,053,682	-		GFF2995	0.29	-1.3
3,053,713	+		GFF2995	0.32	-0.5
3,053,731	-		GFF2995	0.34	-0.0
3,053,778	+		GFF2995	0.38	+0.7
3,053,778	+		GFF2995	0.38	-0.5
3,053,778	+		GFF2995	0.38	+0.3
3,053,786	-		GFF2995	0.38	+0.5
3,053,786	-		GFF2995	0.38	-2.2
3,053,786	-		GFF2995	0.38	-1.4
3,053,793	+		GFF2995	0.39	-1.5
3,053,795	+		GFF2995	0.39	+0.0
3,053,795	+		GFF2995	0.39	-0.4
3,053,795	+		GFF2995	0.39	+0.3
3,053,795	+		GFF2995	0.39	-0.4
3,053,795	+		GFF2995	0.39	-1.6
3,053,795	+		GFF2995	0.39	-3.0
3,053,795	+		GFF2995	0.39	-0.4
3,053,795	+		GFF2995	0.39	+0.8
3,053,795	+		GFF2995	0.39	-0.0
3,053,795	+		GFF2995	0.39	-0.5
3,053,795	+		GFF2995	0.39	-0.8
3,053,795	+		GFF2995	0.39	-0.7
3,053,795	+		GFF2995	0.39	+0.9
3,053,795	+		GFF2995	0.39	-0.7
3,053,795	+		GFF2995	0.39	-0.9
3,053,795	+		GFF2995	0.39	-0.5
3,053,795	+		GFF2995	0.39	-1.2
3,053,795	+		GFF2995	0.39	+0.0
3,053,795	+		GFF2995	0.39	-0.1
3,053,795	+		GFF2995	0.39	-0.2
3,053,795	+		GFF2995	0.39	-0.0
3,053,802	-		GFF2995	0.40	-1.1
3,053,803	-		GFF2995	0.40	-0.8
3,053,803	-		GFF2995	0.40	-1.6
3,053,803	-		GFF2995	0.40	+0.1
3,053,803	-		GFF2995	0.40	-0.6
3,053,803	-		GFF2995	0.40	-2.6
3,053,803	-		GFF2995	0.40	-0.8
3,053,803	-		GFF2995	0.40	+1.9
3,053,803	-		GFF2995	0.40	+1.4
3,053,803	-		GFF2995	0.40	-0.3
3,053,803	-		GFF2995	0.40	+0.5
3,053,803	-		GFF2995	0.40	+1.0
3,053,803	-		GFF2995	0.40	+2.1
3,053,803	-		GFF2995	0.40	+0.7
3,053,803	-		GFF2995	0.40	+0.3
3,053,803	-		GFF2995	0.40	-0.2
3,053,803	-		GFF2995	0.40	-2.0
3,053,803	-		GFF2995	0.40	-2.1
3,053,803	-		GFF2995	0.40	-2.4
3,053,803	-		GFF2995	0.40	-1.2
3,053,823	-		GFF2995	0.42	+0.8
3,053,827	+		GFF2995	0.42	+1.9
3,053,827	+		GFF2995	0.42	+0.5
3,053,828	-		GFF2995	0.42	+1.4
3,053,842	+		GFF2995	0.43	-0.3
3,053,847	+		GFF2995	0.44	-0.4
3,053,851	-		GFF2995	0.44	+0.0
3,053,871	-		GFF2995	0.46	-0.5
3,053,942	+		GFF2995	0.52	-0.7
3,053,952	+		GFF2995	0.53	+0.3
3,053,960	-		GFF2995	0.54	-0.1
3,053,960	-		GFF2995	0.54	-0.3
3,053,960	-		GFF2995	0.54	-0.9
3,053,970	+		GFF2995	0.54	-2.8
3,053,970	+		GFF2995	0.54	-1.4
3,053,970	+		GFF2995	0.54	+0.3
3,053,970	+		GFF2995	0.54	+0.8
3,053,974	-		GFF2995	0.55	+0.4
3,053,979	+		GFF2995	0.55	-1.8
3,053,979	+		GFF2995	0.55	-1.6
3,053,987	-		GFF2995	0.56	+0.2
3,054,005	+		GFF2995	0.58	-0.4
3,054,005	+		GFF2995	0.58	-0.4
3,054,013	-		GFF2995	0.58	+0.4
3,054,013	-		GFF2995	0.58	+1.3
3,054,021	+		GFF2995	0.59	+0.2
3,054,029	-		GFF2995	0.60	+0.1
3,054,029	-		GFF2995	0.60	-0.0
3,054,039	+		GFF2995	0.60	-1.4
3,054,044	+		GFF2995	0.61	+0.4
3,054,044	+		GFF2995	0.61	-1.0
3,054,046	-		GFF2995	0.61	-1.8
3,054,052	-		GFF2995	0.62	-0.7
3,054,059	+		GFF2995	0.62	+0.6
3,054,059	+		GFF2995	0.62	+0.4
3,054,059	+		GFF2995	0.62	-1.3
3,054,062	+		GFF2995	0.62	-0.9
3,054,062	+		GFF2995	0.62	-2.1
3,054,067	-		GFF2995	0.63	-2.0
3,054,070	-		GFF2995	0.63	-1.0
3,054,072	+		GFF2995	0.63	+0.5
3,054,076	+		GFF2995	0.64	-0.1
3,054,100	-		GFF2995	0.66	-2.1
3,054,104	+		GFF2995	0.66	+0.5
3,054,104	+		GFF2995	0.66	+0.7
3,054,137	-		GFF2995	0.69	-0.4
3,054,144	-		GFF2995	0.70	+0.5
3,054,149	+		GFF2995	0.70	-0.6
3,054,157	-		GFF2995	0.71	-1.5
3,054,174	+		GFF2995	0.72	-0.8
3,054,194	-		GFF2995	0.74	-1.2
3,054,216	+		GFF2995	0.76	-0.3
3,054,221	+		GFF2995	0.76	+0.9
3,054,238	+		GFF2995	0.78	-0.9
3,054,244	+		GFF2995	0.78	+0.4
3,054,247	+		GFF2995	0.79	+0.2
3,054,247	-		GFF2995	0.79	+0.7
3,054,263	+		GFF2995	0.80	+0.4
3,054,272	+		GFF2995	0.81	+1.5
3,054,272	+		GFF2995	0.81	-0.7
3,054,281	+		GFF2995	0.82	+0.7
3,054,293	+		GFF2995	0.83	-1.5
3,054,313	+		GFF2995	0.84	-1.2
3,054,316	-		GFF2995	0.85	-0.7
3,054,321	-		GFF2995	0.85	+0.3
3,054,333	+		GFF2995	0.86	+0.2
3,054,339	+		GFF2995	0.87	-0.5
3,054,341	+		GFF2995	0.87	+0.5
3,054,341	+		GFF2995	0.87	-0.8
3,054,341	-		GFF2995	0.87	+0.1
3,054,349	-		GFF2995	0.87	+0.2
3,054,374	-		GFF2995	0.90	-1.4
3,054,396	+				-0.3
3,054,396	+				-0.1
3,054,396	+				-2.4
3,054,404	-				+0.1
3,054,452	+				-0.2
3,054,452	+				-0.5
3,054,452	+				+0.0
3,054,452	+				+0.3
3,054,452	+				-1.4
3,054,452	+				+0.2
3,054,460	-				+1.4
3,054,460	-				+0.3
3,054,504	+				+1.2
3,054,509	+				-0.2
3,054,510	+				-1.0
3,054,569	+				-2.1
3,054,569	+				-2.0
3,054,569	+				+0.5
3,054,596	+				-1.4
3,054,596	+				+0.0
3,054,604	-				+0.1
3,054,606	+				+1.1
3,054,606	+				+0.5
3,054,614	-				+1.0
3,054,614	-				-0.2
3,054,614	-				+1.8
3,054,614	-				-0.6
3,054,648	-				-0.2
3,054,650	+				-0.1
3,054,650	+				+0.3
3,054,665	-				-1.1
3,054,665	-				+1.2
3,054,667	-				-1.2
3,054,683	-				+0.1
3,054,704	-				-1.0
3,054,719	-				-2.7
3,054,727	+				+0.3
3,054,731	-				-0.1
3,054,750	+		GFF2996	0.10	+0.4
3,054,759	+		GFF2996	0.11	-1.3
3,054,767	-		GFF2996	0.11	-0.1
3,054,767	-		GFF2996	0.11	-0.5
3,054,767	-		GFF2996	0.11	-2.2
3,054,780	-		GFF2996	0.12	+0.4
3,054,782	+		GFF2996	0.13	-0.7
3,054,782	+		GFF2996	0.13	-2.2
3,054,784	+		GFF2996	0.13	-0.1
3,054,784	+		GFF2996	0.13	-0.2
3,054,784	+		GFF2996	0.13	+1.1
3,054,784	+		GFF2996	0.13	-0.8
3,054,792	-		GFF2996	0.13	-0.9
3,054,792	-		GFF2996	0.13	-2.2
3,054,792	-		GFF2996	0.13	-1.4
3,054,792	-		GFF2996	0.13	+0.2
3,054,792	-		GFF2996	0.13	-0.3
3,054,797	-		GFF2996	0.14	-0.4
3,054,850	+		GFF2996	0.18	-1.3
3,054,856	+		GFF2996	0.18	+1.1
3,054,858	-		GFF2996	0.18	+0.6
3,054,874	+		GFF2996	0.20	-0.8
3,054,910	-		GFF2996	0.22	-0.3
3,054,926	+		GFF2996	0.24	-0.3
3,054,926	+		GFF2996	0.24	-0.9
3,054,926	+		GFF2996	0.24	-1.3
3,054,926	+		GFF2996	0.24	+0.4
3,054,934	-		GFF2996	0.24	+0.3
3,054,934	-		GFF2996	0.24	-1.5
3,054,934	-		GFF2996	0.24	-0.2
3,054,934	-		GFF2996	0.24	+0.1
3,054,934	-		GFF2996	0.24	+0.9
3,054,934	-		GFF2996	0.24	+0.7
3,054,934	-		GFF2996	0.24	-0.9
3,054,934	-		GFF2996	0.24	+0.0
3,054,943	+		GFF2996	0.25	+0.2
3,054,950	-		GFF2996	0.25	+0.7
3,054,951	+		GFF2996	0.26	-2.6
3,054,955	+		GFF2996	0.26	-0.2
3,054,961	+		GFF2996	0.26	+0.7
3,054,961	+		GFF2996	0.26	-1.1
3,054,961	+		GFF2996	0.26	-1.4
3,054,961	+		GFF2996	0.26	-0.8
3,054,963	-		GFF2996	0.26	+0.5
3,054,963	-		GFF2996	0.26	+1.3
3,054,968	-		GFF2996	0.27	+0.1
3,054,972	+		GFF2996	0.27	+1.0
3,054,974	-		GFF2996	0.27	+0.7
3,054,974	-		GFF2996	0.27	-0.8
3,055,005	-		GFF2996	0.30	-1.4
3,055,015	-		GFF2996	0.30	+0.0
3,055,015	-		GFF2996	0.30	+0.2
3,055,015	-		GFF2996	0.30	-0.7
3,055,020	+		GFF2996	0.31	-1.4
3,055,025	+		GFF2996	0.31	+1.4
3,055,025	+		GFF2996	0.31	-0.0
3,055,026	-		GFF2996	0.31	-2.3
3,055,033	-		GFF2996	0.32	+0.2
3,055,033	-		GFF2996	0.32	-0.3
3,055,033	-		GFF2996	0.32	-1.3
3,055,038	+		GFF2996	0.32	-0.9
3,055,049	+		GFF2996	0.33	+1.1
3,055,049	+		GFF2996	0.33	+0.4
3,055,057	-		GFF2996	0.34	-0.0
3,055,078	-		GFF2996	0.35	+0.6
3,055,096	+		GFF2996	0.37	+0.7
3,055,126	+		GFF2996	0.39	+0.2
3,055,131	+		GFF2996	0.39	-0.6
3,055,132	+		GFF2996	0.39	-1.1
3,055,139	-		GFF2996	0.40	-2.5
3,055,140	-		GFF2996	0.40	-1.7
3,055,146	-		GFF2996	0.40	-1.0
3,055,154	+		GFF2996	0.41	+0.6
3,055,159	+		GFF2996	0.41	-0.6
3,055,162	-		GFF2996	0.42	+1.1
3,055,164	+		GFF2996	0.42	+1.1
3,055,164	+		GFF2996	0.42	-1.7
3,055,169	+		GFF2996	0.42	-1.4
3,055,172	-		GFF2996	0.42	-0.5
3,055,172	-		GFF2996	0.42	-0.5
3,055,177	-		GFF2996	0.43	-0.2
3,055,179	+		GFF2996	0.43	+0.9
3,055,179	+		GFF2996	0.43	+0.3
3,055,179	+		GFF2996	0.43	-0.8
3,055,179	+		GFF2996	0.43	+0.5
3,055,179	+		GFF2996	0.43	+0.9
3,055,180	+		GFF2996	0.43	+0.4
3,055,180	+		GFF2996	0.43	-2.3
3,055,180	+		GFF2996	0.43	+0.9
3,055,184	+		GFF2996	0.43	-2.7
3,055,187	-		GFF2996	0.44	+0.5
3,055,187	-		GFF2996	0.44	+0.7
3,055,188	-		GFF2996	0.44	+0.2
3,055,190	+		GFF2996	0.44	-0.4
3,055,205	-		GFF2996	0.45	-1.8
3,055,205	-		GFF2996	0.45	+0.7
3,055,216	+		GFF2996	0.46	+0.9
3,055,224	-		GFF2996	0.46	+1.2
3,055,226	+		GFF2996	0.47	+1.1
3,055,234	-		GFF2996	0.47	-0.4
3,055,246	-		GFF2996	0.48	+0.9
3,055,256	+		GFF2996	0.49	+0.4
3,055,257	+		GFF2996	0.49	-0.3
3,055,257	+		GFF2996	0.49	-2.3
3,055,298	+		GFF2996	0.52	+1.1
3,055,316	-		GFF2996	0.53	-0.9
3,055,321	+		GFF2996	0.54	-0.3
3,055,321	+		GFF2996	0.54	-1.7
3,055,325	+		GFF2996	0.54	-0.6
3,055,327	-		GFF2996	0.54	+1.2
3,055,327	-		GFF2996	0.54	-0.5
3,055,331	-		GFF2996	0.55	+1.0
3,055,340	+		GFF2996	0.55	+0.4
3,055,368	+		GFF2996	0.57	+0.1
3,055,417	+		GFF2996	0.61	+0.6
3,055,425	-		GFF2996	0.62	-0.1
3,055,425	-		GFF2996	0.62	+0.2
3,055,451	-		GFF2996	0.64	+0.1
3,055,456	+		GFF2996	0.64	+0.4
3,055,456	+		GFF2996	0.64	+1.4
3,055,456	-		GFF2996	0.64	+0.3
3,055,464	-		GFF2996	0.65	+1.2
3,055,468	+		GFF2996	0.65	-1.7
3,055,468	+		GFF2996	0.65	-1.1
3,055,468	+		GFF2996	0.65	-0.5
3,055,468	+		GFF2996	0.65	-0.9
3,055,476	-		GFF2996	0.66	+0.2
3,055,476	-		GFF2996	0.66	-0.0
3,055,476	-		GFF2996	0.66	-1.5
3,055,476	-		GFF2996	0.66	+0.0
3,055,497	+		GFF2996	0.67	+0.9
3,055,499	+		GFF2996	0.68	+0.6
3,055,499	+		GFF2996	0.68	-0.3
3,055,499	+		GFF2996	0.68	-1.5
3,055,505	-		GFF2996	0.68	+0.1
3,055,558	-		GFF2996	0.72	-0.3
3,055,563	+		GFF2996	0.72	+0.6
3,055,569	+		GFF2996	0.73	+0.5
3,055,571	-		GFF2996	0.73	-2.3
3,055,571	-		GFF2996	0.73	+1.0
3,055,593	-		GFF2996	0.75	-0.1
3,055,617	+		GFF2996	0.77	-0.2
3,055,617	+		GFF2996	0.77	-1.5
3,055,624	+		GFF2996	0.77	-0.6
3,055,624	+		GFF2996	0.77	+0.8
3,055,625	-		GFF2996	0.77	-0.6
3,055,632	-		GFF2996	0.78	-1.3
3,055,643	-		GFF2996	0.79	-0.4
3,055,660	-		GFF2996	0.80	-0.5
3,055,660	-		GFF2996	0.80	-0.1
3,055,667	+		GFF2996	0.80	+0.3
3,055,675	-		GFF2996	0.81	-0.1
3,055,683	-		GFF2996	0.82	+0.1
3,055,691	+		GFF2996	0.82	+0.6
3,055,693	+		GFF2996	0.82	+0.7
3,055,693	+		GFF2996	0.82	-1.5
3,055,701	-		GFF2996	0.83	+0.2
3,055,701	-		GFF2996	0.83	+1.3
3,055,701	-		GFF2996	0.83	-2.2
3,055,711	-		GFF2996	0.84	-0.3
3,055,737	+		GFF2996	0.86	+0.1
3,055,746	-		GFF2996	0.86	-2.3
3,055,751	-		GFF2996	0.87	-0.4
3,055,756	-		GFF2996	0.87	-0.2
3,055,776	-		GFF2996	0.89	+1.3
3,055,776	-		GFF2996	0.89	-0.4
3,055,785	+		GFF2996	0.89	+0.3
3,055,790	+		GFF2996	0.90	-0.7
3,055,790	+		GFF2996	0.90	-0.7
3,055,790	+		GFF2996	0.90	-0.6
3,055,793	-				+0.2
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