Strain Fitness in Sphingobium sp. HT1-2 around GFF2893

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,952,297	-		GFF2891	0.27	-0.3
2,952,297	-		GFF2891	0.27	-1.3
2,952,363	+		GFF2891	0.36	-1.2
2,952,690	-		GFF2891	0.79	-1.3
2,952,817	+				-1.7
2,952,817	+				+1.0
2,952,825	-				+0.4
2,952,829	+				-0.3
2,952,829	+				+0.4
2,952,829	+				+0.7
2,952,829	+				-1.6
2,952,829	+				+0.3
2,952,829	+				-0.4
2,952,829	+				+0.9
2,952,829	+				-0.1
2,952,829	+				-1.0
2,952,832	-				-1.8
2,952,834	+				-0.3
2,952,834	+				-0.3
2,952,834	+				+0.8
2,952,837	-				-0.8
2,952,837	-				-0.9
2,952,837	-				+1.2
2,952,837	-				-1.2
2,952,837	-				-0.6
2,952,837	-				+0.3
2,952,837	-				+0.2
2,952,837	-				-0.3
2,952,837	-				+0.5
2,952,837	-				-0.1
2,952,837	-				-0.5
2,952,837	-				-0.3
2,952,837	-				-0.6
2,952,837	-				-0.7
2,952,837	-				+0.1
2,952,837	-				-0.6
2,952,837	-				-0.0
2,952,837	-				-0.6
2,952,842	-				+0.2
2,952,842	-				-0.2
2,952,842	-				-1.6
2,952,842	-				+0.2
2,952,842	-				+0.5
2,952,842	-				+0.7
2,952,842	-				-0.3
2,952,876	-				+0.7
2,952,878	-				-0.5
2,952,883	-				+1.6
2,952,883	-				-0.1
2,952,898	+				+0.5
2,952,899	-				-0.6
2,952,945	-				-0.2
2,952,948	+				+0.7
2,952,948	+				-0.3
2,952,948	+				-4.5
2,952,948	+				+0.5
2,952,948	+				-0.0
2,952,956	-				-0.8
2,952,956	-				-2.6
2,952,956	-				-0.1
2,952,956	-				-1.8
2,952,956	-				+0.2
2,952,956	-				+0.3
2,952,989	+				+0.2
2,952,990	-				-0.9
2,952,998	+				-0.5
2,952,999	+				+0.1
2,953,000	+				-0.2
2,953,000	+				-0.1
2,953,000	+				+0.7
2,953,005	+				+0.3
2,953,005	+				+2.0
2,953,005	+				-0.9
2,953,005	+				+1.5
2,953,008	-				-0.3
2,953,008	-				-3.6
2,953,012	+				+0.1
2,953,013	-				-1.2
2,953,013	-				+1.0
2,953,020	-				-0.2
2,953,032	-		GFF2892	0.10	-0.8
2,953,032	-		GFF2892	0.10	+0.5
2,953,035	+		GFF2892	0.11	+0.1
2,953,043	-		GFF2892	0.14	-0.1
2,953,043	-		GFF2892	0.14	-0.1
2,953,057	+		GFF2892	0.19	-2.0
2,953,062	+		GFF2892	0.21	-1.7
2,953,062	+		GFF2892	0.21	-0.7
2,953,062	+		GFF2892	0.21	+0.2
2,953,062	+		GFF2892	0.21	-0.9
2,953,062	+		GFF2892	0.21	+0.7
2,953,067	+		GFF2892	0.22	-2.0
2,953,070	-		GFF2892	0.23	-0.3
2,953,070	-		GFF2892	0.23	-0.1
2,953,070	-		GFF2892	0.23	-0.4
2,953,070	-		GFF2892	0.23	-0.7
2,953,070	-		GFF2892	0.23	-0.5
2,953,070	-		GFF2892	0.23	-0.6
2,953,099	+		GFF2892	0.33	+0.2
2,953,155	+		GFF2892	0.53	-0.3
2,953,160	+		GFF2892	0.54	-2.5
2,953,163	+		GFF2892	0.55	+0.9
2,953,178	+		GFF2892	0.60	-1.2
2,953,178	+		GFF2892	0.60	+0.7
2,953,178	+		GFF2892	0.60	+0.4
2,953,178	+		GFF2892	0.60	+0.1
2,953,178	+		GFF2892	0.60	+0.1
2,953,178	+		GFF2892	0.60	-0.9
2,953,178	+		GFF2892	0.60	-0.3
2,953,186	-		GFF2892	0.63	-0.9
2,953,186	-		GFF2892	0.63	+0.1
2,953,186	-		GFF2892	0.63	-0.8
2,953,186	-		GFF2892	0.63	+0.6
2,953,186	-		GFF2892	0.63	+1.4
2,953,186	-		GFF2892	0.63	+0.7
2,953,186	-		GFF2892	0.63	+0.4
2,953,186	-		GFF2892	0.63	+0.3
2,953,186	-		GFF2892	0.63	+1.1
2,953,186	-		GFF2892	0.63	-0.3
2,953,186	-		GFF2892	0.63	+0.5
2,953,203	-		GFF2892	0.69	+1.1
2,953,211	+		GFF2892	0.72	-0.3
2,953,221	+		GFF2892	0.75	-1.8
2,953,243	-		GFF2892	0.83	-1.7
2,953,244	-		GFF2892	0.83	+0.4
2,953,244	-		GFF2892	0.83	+0.3
2,953,258	-		GFF2892	0.88	+0.3
2,953,276	-				+2.1
2,953,282	+				+2.0
2,953,284	-				+1.2
2,953,284	-				-0.6
2,953,290	-				-0.3
2,953,290	-				-0.3
2,953,324	-				-3.3
2,953,332	-				-2.8
2,953,334	-				-2.3
2,953,349	-				-0.8
2,953,356	+				-1.5
2,953,361	+				-2.0
2,953,361	+				-3.3
2,953,369	-		GFF2893	0.11	-2.8
2,953,369	-		GFF2893	0.11	-2.3
2,953,392	+		GFF2893	0.14	-1.6
2,953,399	-		GFF2893	0.15	-2.3
2,953,404	-		GFF2893	0.15	-1.9
2,953,418	-		GFF2893	0.17	-2.1
2,953,436	-		GFF2893	0.20	-2.5
2,953,443	+		GFF2893	0.21	-2.0
2,953,463	-		GFF2893	0.24	-2.7
2,953,474	+		GFF2893	0.25	-2.5
2,953,474	+		GFF2893	0.25	-4.3
2,953,476	+		GFF2893	0.25	-3.1
2,953,482	-		GFF2893	0.26	-3.2
2,953,486	-		GFF2893	0.27	-1.6
2,953,534	+		GFF2893	0.33	-2.2
2,953,554	+		GFF2893	0.36	-2.9
2,953,575	+		GFF2893	0.39	-3.5
2,953,575	+		GFF2893	0.39	-2.3
2,953,575	+		GFF2893	0.39	-2.7
2,953,575	+		GFF2893	0.39	-2.7
2,953,578	-		GFF2893	0.40	-3.3
2,953,583	-		GFF2893	0.40	-2.0
2,953,583	-		GFF2893	0.40	-3.5
2,953,619	+		GFF2893	0.45	-1.4
2,953,629	+		GFF2893	0.47	-4.7
2,953,666	-		GFF2893	0.52	-1.5
2,953,690	+		GFF2893	0.55	-1.9
2,953,697	-		GFF2893	0.56	-2.3
2,953,703	-		GFF2893	0.57	-3.8
2,953,728	+		GFF2893	0.60	-3.4
2,953,731	-		GFF2893	0.61	-1.3
2,953,736	-		GFF2893	0.61	-3.1
2,953,757	+		GFF2893	0.64	-2.9
2,953,765	-		GFF2893	0.65	-1.8
2,953,765	-		GFF2893	0.65	-2.9
2,953,772	+		GFF2893	0.66	-3.3
2,953,777	+		GFF2893	0.67	-3.3
2,953,796	-		GFF2893	0.70	-0.8
2,953,800	+		GFF2893	0.70	-2.5
2,953,815	+		GFF2893	0.72	-2.2
2,953,822	+		GFF2893	0.73	-2.9
2,953,822	+		GFF2893	0.73	-2.2
2,953,822	+		GFF2893	0.73	-3.0
2,953,823	-		GFF2893	0.73	-2.0
2,953,830	-		GFF2893	0.74	-3.4
2,953,831	-		GFF2893	0.75	-3.2
2,953,832	+		GFF2893	0.75	-1.8
2,953,832	+		GFF2893	0.75	-1.9
2,953,832	+		GFF2893	0.75	-2.1
2,953,832	+		GFF2893	0.75	-1.8
2,953,832	+		GFF2893	0.75	-3.0
2,953,832	+		GFF2893	0.75	-1.9
2,953,832	+		GFF2893	0.75	-3.2
2,953,832	+		GFF2893	0.75	-3.3
2,953,832	+		GFF2893	0.75	-3.3
2,953,835	-		GFF2893	0.75	-1.3
2,953,835	-		GFF2893	0.75	-2.3
2,953,840	-		GFF2893	0.76	-2.9
2,953,840	-		GFF2893	0.76	-2.7
2,953,840	-		GFF2893	0.76	-2.6
2,953,840	-		GFF2893	0.76	-2.8
2,953,840	-		GFF2893	0.76	-1.0
2,953,840	-		GFF2893	0.76	-3.4
2,953,840	-		GFF2893	0.76	-3.8
2,953,840	-		GFF2893	0.76	-2.8
2,953,840	-		GFF2893	0.76	-3.6
2,953,840	-		GFF2893	0.76	-2.6
2,953,840	-		GFF2893	0.76	-2.7
2,953,840	-		GFF2893	0.76	-2.7
2,953,883	+		GFF2893	0.82	-2.8
2,953,884	+		GFF2893	0.82	-3.7
2,953,889	+		GFF2893	0.83	-1.9
2,953,890	+		GFF2893	0.83	-2.5
2,953,890	+		GFF2893	0.83	-2.3
2,953,890	+		GFF2893	0.83	-3.8
2,953,890	+		GFF2893	0.83	+0.3
2,953,890	+		GFF2893	0.83	-3.5
2,953,891	-		GFF2893	0.83	-1.2
2,953,891	-		GFF2893	0.83	-1.3
2,953,898	-		GFF2893	0.84	-3.5
2,953,898	-		GFF2893	0.84	-1.3
2,953,898	-		GFF2893	0.84	-0.8
2,953,898	-		GFF2893	0.84	-2.9
2,953,951	+				-3.0
2,953,951	+				-3.2
2,953,958	+				-2.7
2,953,958	+				-4.6
2,953,959	-				-2.4
2,953,959	-				-0.9
2,953,959	-				-2.1
2,953,959	-				-3.3
2,953,959	-				-1.8
2,953,967	-				-0.7
2,953,977	-				-2.6
2,953,996	+				-3.0
2,953,996	+				-3.1
2,954,004	+				-2.0
2,954,005	+				-3.2
2,954,012	-				-1.8
2,954,012	-				-2.0
2,954,016	+				-2.2
2,954,016	+				-3.1
2,954,016	+				-2.7
2,954,016	+				-2.5
2,954,016	+				-1.2
2,954,016	+				-1.5
2,954,016	+				-2.0
2,954,019	-				-2.7
2,954,019	-				-0.6
2,954,021	+				-0.8
2,954,021	+				-1.9
2,954,021	+				-3.2
2,954,021	+				-3.9
2,954,021	+				-1.2
2,954,021	+				+1.1
2,954,021	+				-2.1
2,954,021	+				-0.1
2,954,024	-				-0.1
2,954,024	-				+0.2
2,954,024	-				-1.8
2,954,024	-				-0.7
2,954,024	-				-1.9
2,954,024	-				+0.3
2,954,029	-				-2.5
2,954,029	-				-1.7
2,954,029	-				+0.4
2,954,029	-				+0.0
2,954,029	-				-1.3
2,954,029	-				-1.3
2,954,029	-				-2.2
2,954,029	-				-0.8
2,954,029	-				-1.5
2,954,031	+				-2.1
2,954,031	+				-0.7
2,954,031	+				+0.2
2,954,031	+				-2.1
2,954,031	+				-1.3
2,954,031	+				-0.7
2,954,031	+				-1.6
2,954,031	+				-1.3
2,954,031	+				-1.1
2,954,031	+				-2.4
2,954,031	+				-1.8
2,954,031	+				-2.4
2,954,031	+				-1.9
2,954,034	-				-0.6
2,954,034	-				-1.3
2,954,039	+				+0.3
2,954,039	-				-1.2
2,954,039	-				-0.3
2,954,039	-				-0.1
2,954,039	-				+0.3
2,954,039	-				-0.5
2,954,039	-				-0.8
2,954,039	-				+0.0
2,954,039	-				-1.5
2,954,039	-				-1.0
2,954,039	-				+0.0
2,954,039	-				+0.5
2,954,039	-				-1.3
2,954,039	-				+0.7
2,954,039	-				+0.2
2,954,039	-				+0.1
2,954,045	+				-0.8
2,954,045	+				-1.5
2,954,045	+				-2.0
2,954,045	+				-1.7
2,954,045	+				-2.7
2,954,046	-				-0.8
2,954,053	-				-1.2
2,954,053	-				+0.2
2,954,053	-				+1.7
2,954,053	-				+0.7
2,954,053	-				-0.7