Strain Fitness in Sphingobium sp. HT1-2 around GFF2810

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,850,896	+				-0.0
2,850,896	+				-1.1
2,850,897	-				-0.8
2,850,904	-				+0.2
2,850,904	-				+0.5
2,850,918	+		GFF2809	0.11	+0.1
2,850,952	+		GFF2809	0.17	-2.3
2,850,960	-		GFF2809	0.19	+0.2
2,850,970	+		GFF2809	0.21	+0.2
2,850,971	+		GFF2809	0.21	+0.3
2,850,971	+		GFF2809	0.21	-0.9
2,850,979	-		GFF2809	0.22	-1.5
2,850,979	-		GFF2809	0.22	+0.2
2,850,979	-		GFF2809	0.22	-1.3
2,850,984	-		GFF2809	0.23	-1.6
2,850,984	-		GFF2809	0.23	-1.0
2,850,989	-		GFF2809	0.24	-0.4
2,851,045	+		GFF2809	0.35	-0.4
2,851,074	+		GFF2809	0.40	+0.4
2,851,123	-		GFF2809	0.49	+0.7
2,851,130	-		GFF2809	0.50	+1.8
2,851,145	+		GFF2809	0.53	+1.2
2,851,153	-		GFF2809	0.55	-0.6
2,851,153	-		GFF2809	0.55	-0.5
2,851,153	-		GFF2809	0.55	+0.3
2,851,200	+		GFF2809	0.63	+0.3
2,851,210	+		GFF2809	0.65	+0.7
2,851,240	-		GFF2809	0.71	-1.6
2,851,246	+		GFF2809	0.72	-0.1
2,851,254	-		GFF2809	0.73	+0.3
2,851,254	-		GFF2809	0.73	-1.8
2,851,261	+		GFF2809	0.74	-1.2
2,851,272	+		GFF2809	0.76	+0.8
2,851,280	-		GFF2809	0.78	+0.9
2,851,295	-		GFF2809	0.81	-0.6
2,851,302	+		GFF2809	0.82	+0.4
2,851,302	+		GFF2809	0.82	-0.7
2,851,302	+		GFF2809	0.82	+0.0
2,851,302	+		GFF2809	0.82	-0.2
2,851,308	+		GFF2809	0.83	+0.6
2,851,318	+		GFF2809	0.85	+1.3
2,851,318	+		GFF2809	0.85	-0.3
2,851,326	-		GFF2809	0.86	-0.5
2,851,345	-				+0.7
2,851,360	-				-1.2
2,851,375	-				-1.8
2,851,379	+				-0.3
2,851,382	-				-1.2
2,851,384	+				-1.8
2,851,387	-				-0.8
2,851,387	-				+0.4
2,851,393	+				+0.1
2,851,394	+				+0.5
2,851,394	+				-0.5
2,851,395	+				-0.3
2,851,399	+				-1.7
2,851,400	+				+0.2
2,851,400	+				+0.2
2,851,402	-				-1.0
2,851,403	-				+1.2
2,851,408	-				-0.4
2,851,408	-				-2.1
2,851,426	-				-0.2
2,851,434	+				+0.3
2,851,479	+				-0.1
2,851,504	+				-0.8
2,851,504	+				+0.6
2,851,512	-				-1.5
2,851,512	-				-1.2
2,851,512	-				-2.6
2,851,512	-				+0.8
2,851,512	-				-0.1
2,851,512	-				+1.0
2,851,517	-				-1.5
2,851,517	-				-0.5
2,851,517	-				-0.0
2,851,520	+				+0.0
2,851,520	+				-0.0
2,851,520	+				-1.2
2,851,528	-				-2.8
2,851,528	-				+0.1
2,851,528	-				-0.5
2,851,528	-				+0.7
2,851,550	-				-0.7
2,851,574	-				-0.1
2,851,584	-				-0.9
2,851,584	-				+0.4
2,851,597	+				-0.7
2,851,603	-				-1.8
2,851,627	+				+0.2
2,851,633	+				-0.5
2,851,633	+				-0.2
2,851,641	-				-0.9
2,851,641	-				+0.9
2,851,646	-				-0.2
2,851,656	+				+1.2
2,851,656	+				+0.0
2,851,656	+				-1.2
2,851,661	+				+0.1
2,851,661	+				-1.5
2,851,664	-				+0.2
2,851,664	-				-1.6
2,851,666	+				-0.2
2,851,669	-				+1.3
2,851,674	-				-0.1
2,851,695	+				-0.8
2,851,756	+				-1.6
2,851,769	+				-0.7
2,851,769	+				+0.5
2,851,769	+				-0.9
2,851,792	+				-0.9
2,851,792	-				-0.1
2,851,800	-				-0.9
2,851,806	-				-0.5
2,851,824	-				+0.5
2,851,834	+				+0.6
2,851,837	-				+0.7
2,851,843	+				+0.7
2,851,854	+				-2.2
2,851,854	+				+1.6
2,851,862	-				+0.7
2,851,874	-				-0.8
2,851,895	+				+0.9
2,851,896	+				+0.7
2,851,896	+				-1.0
2,851,904	-				+0.7
2,851,904	-				-2.1
2,851,904	-				-0.1
2,851,904	-				+0.2
2,851,908	-				+1.0
2,851,917	+				-1.8
2,851,929	+				-0.1
2,851,997	+				+0.3
2,851,997	+				-1.3
2,852,004	-				-0.7
2,852,011	-				-0.1
2,852,020	-				-0.2
2,852,050	-		GFF2810	0.11	-0.8
2,852,052	+		GFF2810	0.11	-0.7
2,852,090	+		GFF2810	0.13	+0.7
2,852,100	+		GFF2810	0.14	-0.1
2,852,109	-		GFF2810	0.15	-0.2
2,852,114	+		GFF2810	0.15	+0.8
2,852,121	+		GFF2810	0.15	-0.5
2,852,122	-		GFF2810	0.15	-2.3
2,852,127	+		GFF2810	0.16	+0.9
2,852,131	+		GFF2810	0.16	-0.1
2,852,134	-		GFF2810	0.16	+0.9
2,852,139	-		GFF2810	0.16	-1.2
2,852,172	+		GFF2810	0.18	-0.0
2,852,187	+		GFF2810	0.19	-0.2
2,852,187	+		GFF2810	0.19	-0.2
2,852,187	+		GFF2810	0.19	+0.1
2,852,187	+		GFF2810	0.19	+0.7
2,852,187	+		GFF2810	0.19	-1.3
2,852,187	+		GFF2810	0.19	+0.6
2,852,195	-		GFF2810	0.20	-2.0
2,852,195	-		GFF2810	0.20	+0.5
2,852,195	-		GFF2810	0.20	-0.5
2,852,195	-		GFF2810	0.20	-1.8
2,852,195	-		GFF2810	0.20	+0.5
2,852,195	-		GFF2810	0.20	-1.0
2,852,195	-		GFF2810	0.20	+0.4
2,852,195	-		GFF2810	0.20	-1.8
2,852,205	-		GFF2810	0.20	+0.0
2,852,205	-		GFF2810	0.20	+0.6
2,852,220	+		GFF2810	0.21	+0.0
2,852,220	+		GFF2810	0.21	-0.4
2,852,220	+		GFF2810	0.21	-0.0
2,852,220	+		GFF2810	0.21	-1.7
2,852,220	+		GFF2810	0.21	-0.2
2,852,224	+		GFF2810	0.22	+1.2
2,852,225	+		GFF2810	0.22	-1.3
2,852,228	-		GFF2810	0.22	-0.5
2,852,228	-		GFF2810	0.22	-0.1
2,852,228	-		GFF2810	0.22	-0.1
2,852,233	-		GFF2810	0.22	+0.8
2,852,235	+		GFF2810	0.22	-0.1
2,852,239	+		GFF2810	0.23	-0.3
2,852,261	+		GFF2810	0.24	-2.3
2,852,274	-		GFF2810	0.25	-0.4
2,852,283	-		GFF2810	0.25	+1.0
2,852,286	+		GFF2810	0.25	-1.5
2,852,299	+		GFF2810	0.26	-1.0
2,852,314	+		GFF2810	0.27	-0.6
2,852,319	+		GFF2810	0.28	+0.3
2,852,338	+		GFF2810	0.29	-0.0
2,852,338	+		GFF2810	0.29	-0.4
2,852,338	+		GFF2810	0.29	-1.2
2,852,339	+		GFF2810	0.29	-0.0
2,852,354	-		GFF2810	0.30	-0.2
2,852,370	-		GFF2810	0.31	-0.9
2,852,370	-		GFF2810	0.31	-0.3
2,852,396	+		GFF2810	0.32	-2.2
2,852,396	+		GFF2810	0.32	-0.6
2,852,415	+		GFF2810	0.33	+0.4
2,852,437	+		GFF2810	0.35	-0.1
2,852,437	+		GFF2810	0.35	+0.4
2,852,437	+		GFF2810	0.35	+1.0
2,852,437	+		GFF2810	0.35	-0.3
2,852,437	+		GFF2810	0.35	+0.3
2,852,437	+		GFF2810	0.35	-1.5
2,852,437	+		GFF2810	0.35	-1.1
2,852,437	+		GFF2810	0.35	+0.6
2,852,445	-		GFF2810	0.35	-1.7
2,852,445	-		GFF2810	0.35	-1.0
2,852,445	-		GFF2810	0.35	+0.4
2,852,445	-		GFF2810	0.35	+0.3
2,852,445	-		GFF2810	0.35	-2.2
2,852,445	-		GFF2810	0.35	-2.0
2,852,491	-		GFF2810	0.38	-0.6
2,852,515	+		GFF2810	0.40	-1.6
2,852,515	+		GFF2810	0.40	-0.3
2,852,515	+		GFF2810	0.40	-0.1
2,852,515	+		GFF2810	0.40	+0.7
2,852,515	+		GFF2810	0.40	+0.7
2,852,515	+		GFF2810	0.40	-0.3
2,852,523	-		GFF2810	0.40	-1.5
2,852,523	-		GFF2810	0.40	-1.1
2,852,523	-		GFF2810	0.40	+1.0
2,852,523	-		GFF2810	0.40	+0.2
2,852,523	-		GFF2810	0.40	-2.3
2,852,531	+		GFF2810	0.41	-1.0
2,852,533	+		GFF2810	0.41	-0.9
2,852,541	-		GFF2810	0.41	-0.8
2,852,549	-		GFF2810	0.42	-0.8
2,852,549	-		GFF2810	0.42	-1.3
2,852,565	-		GFF2810	0.43	-0.0
2,852,626	-		GFF2810	0.46	+0.8
2,852,626	-		GFF2810	0.46	-1.2
2,852,631	-		GFF2810	0.47	-1.5
2,852,650	+		GFF2810	0.48	+0.6
2,852,650	+		GFF2810	0.48	-0.6
2,852,658	-		GFF2810	0.48	+0.3
2,852,663	+		GFF2810	0.49	+0.1
2,852,671	-		GFF2810	0.49	-2.1
2,852,671	-		GFF2810	0.49	-0.6
2,852,694	+		GFF2810	0.51	+0.2
2,852,696	+		GFF2810	0.51	-0.6
2,852,726	+		GFF2810	0.53	-0.1
2,852,731	+		GFF2810	0.53	-1.9
2,852,734	-		GFF2810	0.53	-0.4
2,852,739	+		GFF2810	0.53	+0.2
2,852,747	-		GFF2810	0.54	-2.2
2,852,754	+		GFF2810	0.54	+1.2
2,852,756	+		GFF2810	0.55	+1.2
2,852,756	+		GFF2810	0.55	-0.9
2,852,762	-		GFF2810	0.55	-0.1
2,852,762	-		GFF2810	0.55	-0.2
2,852,764	-		GFF2810	0.55	-0.3
2,852,764	-		GFF2810	0.55	-0.2
2,852,764	-		GFF2810	0.55	+0.1
2,852,765	-		GFF2810	0.55	-0.7
2,852,765	-		GFF2810	0.55	-0.5
2,852,784	-		GFF2810	0.56	-1.5
2,852,832	-		GFF2810	0.59	-0.3
2,852,836	+		GFF2810	0.59	-0.8
2,852,836	+		GFF2810	0.59	-1.9
2,852,836	+		GFF2810	0.59	-0.2
2,852,836	+		GFF2810	0.59	+0.0
2,852,836	+		GFF2810	0.59	+0.8
2,852,837	-		GFF2810	0.60	+0.6
2,852,837	-		GFF2810	0.60	-2.2
2,852,837	-		GFF2810	0.60	-0.5
2,852,837	-		GFF2810	0.60	-0.3
2,852,844	-		GFF2810	0.60	+0.2
2,852,844	-		GFF2810	0.60	+0.3
2,852,844	-		GFF2810	0.60	-0.1
2,852,849	-		GFF2810	0.60	+0.0
2,852,849	-		GFF2810	0.60	+0.7
2,852,850	+		GFF2810	0.60	-0.0
2,852,850	+		GFF2810	0.60	+0.7
2,852,850	+		GFF2810	0.60	+0.5
2,852,850	+		GFF2810	0.60	-1.1
2,852,858	-		GFF2810	0.61	+0.1
2,852,858	-		GFF2810	0.61	-0.8
2,852,890	+		GFF2810	0.63	+0.3
2,852,890	-		GFF2810	0.63	-0.6
2,852,909	+		GFF2810	0.64	+0.4
2,852,929	-		GFF2810	0.65	-0.2
2,852,931	+		GFF2810	0.65	+0.1
2,852,940	+		GFF2810	0.66	+0.5
2,852,942	+		GFF2810	0.66	-0.9
2,852,942	+		GFF2810	0.66	-0.6
2,852,942	+		GFF2810	0.66	-0.8
2,852,942	+		GFF2810	0.66	-0.1
2,852,947	+		GFF2810	0.66	-1.2
2,852,950	-		GFF2810	0.66	+0.1
2,852,950	-		GFF2810	0.66	+0.1
2,852,955	-		GFF2810	0.67	+0.1
2,852,955	-		GFF2810	0.67	-0.8
2,852,970	+		GFF2810	0.68	+0.3
2,852,974	+		GFF2810	0.68	-0.5
2,852,974	+		GFF2810	0.68	+0.2
2,852,975	-		GFF2810	0.68	-0.6
2,852,983	-		GFF2810	0.69	-0.3
2,852,991	-		GFF2810	0.69	-0.0
2,853,020	+		GFF2810	0.71	+1.2
2,853,029	+		GFF2810	0.71	+1.2
2,853,060	-		GFF2810	0.73	-0.6
2,853,062	+		GFF2810	0.73	+0.3
2,853,062	-		GFF2810	0.73	-1.8
2,853,070	-		GFF2810	0.74	+1.0
2,853,092	+		GFF2810	0.75	+0.9
2,853,093	+		GFF2810	0.75	+0.2
2,853,101	-		GFF2810	0.76	+0.9
2,853,101	-		GFF2810	0.76	-1.6
2,853,103	+		GFF2810	0.76	+2.1
2,853,107	+		GFF2810	0.76	-1.3
2,853,109	+		GFF2810	0.76	+0.7
2,853,110	+		GFF2810	0.76	+0.7
2,853,111	-		GFF2810	0.76	+0.1
2,853,123	-		GFF2810	0.77	-0.4
2,853,128	-		GFF2810	0.77	-2.0
2,853,128	-		GFF2810	0.77	-0.5
2,853,145	-		GFF2810	0.79	-0.3
2,853,148	+		GFF2810	0.79	-0.2
2,853,148	+		GFF2810	0.79	-1.8
2,853,151	-		GFF2810	0.79	-0.4
2,853,151	-		GFF2810	0.79	-0.1
2,853,151	-		GFF2810	0.79	+0.8
2,853,156	-		GFF2810	0.79	+0.3
2,853,161	+		GFF2810	0.80	-1.5
2,853,163	+		GFF2810	0.80	-0.4
2,853,165	+		GFF2810	0.80	+0.4
2,853,173	-		GFF2810	0.80	-0.8
2,853,182	+		GFF2810	0.81	+0.7
2,853,183	+		GFF2810	0.81	-1.0
2,853,184	+		GFF2810	0.81	-0.0
2,853,193	+		GFF2810	0.81	+0.1
2,853,193	+		GFF2810	0.81	-1.3
2,853,193	+		GFF2810	0.81	-0.1
2,853,193	+		GFF2810	0.81	+0.4
2,853,201	-		GFF2810	0.82	-1.6
2,853,201	-		GFF2810	0.82	-0.1
2,853,212	-		GFF2810	0.83	-1.0
2,853,224	+		GFF2810	0.83	+0.7
2,853,230	+		GFF2810	0.84	-1.8
2,853,232	-		GFF2810	0.84	-2.9
2,853,235	+		GFF2810	0.84	+0.3
2,853,240	+		GFF2810	0.84	-2.3
2,853,240	+		GFF2810	0.84	-1.3
2,853,240	+		GFF2810	0.84	-0.2
2,853,248	-		GFF2810	0.85	-0.8
2,853,248	-		GFF2810	0.85	-0.4
2,853,248	-		GFF2810	0.85	-1.5
2,853,248	-		GFF2810	0.85	+0.3
2,853,248	-		GFF2810	0.85	-0.9
2,853,248	-		GFF2810	0.85	-0.2
2,853,248	-		GFF2810	0.85	-2.5
2,853,248	-		GFF2810	0.85	+0.3
2,853,266	+		GFF2810	0.86	+0.0
2,853,266	+		GFF2810	0.86	+0.0
2,853,271	+		GFF2810	0.86	+1.0
2,853,274	-		GFF2810	0.86	-0.3
2,853,279	-		GFF2810	0.87	+0.4
2,853,284	-		GFF2810	0.87	+0.3
2,853,291	-		GFF2810	0.88	+0.2
2,853,292	+		GFF2810	0.88	+0.9
2,853,293	+		GFF2810	0.88	-0.2
2,853,301	-		GFF2810	0.88	+1.0
2,853,301	-		GFF2810	0.88	-2.4
2,853,301	-		GFF2810	0.88	-0.4
2,853,301	-		GFF2810	0.88	+0.5
2,853,303	+		GFF2810	0.88	+0.7
2,853,311	-		GFF2810	0.89	-2.3
2,853,347	+				-1.6
2,853,351	+				+0.0
2,853,351	+				+0.7
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