Strain Fitness in Sphingobium sp. HT1-2 around GFF2636

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,654,570	-		GFF2635	0.47	+0.7
2,654,573	-		GFF2635	0.47	-1.7
2,654,573	-		GFF2635	0.47	+0.2
2,654,597	+		GFF2635	0.49	-0.8
2,654,605	-		GFF2635	0.49	+0.7
2,654,605	-		GFF2635	0.49	+0.5
2,654,605	-		GFF2635	0.49	-0.3
2,654,605	-		GFF2635	0.49	-0.6
2,654,609	-		GFF2635	0.49	+0.3
2,654,619	-		GFF2635	0.50	+0.4
2,654,620	+		GFF2635	0.50	+0.3
2,654,621	-		GFF2635	0.50	-1.7
2,654,628	-		GFF2635	0.51	-0.1
2,654,628	-		GFF2635	0.51	-0.8
2,654,640	-		GFF2635	0.51	-0.7
2,654,659	-		GFF2635	0.52	+0.0
2,654,662	+		GFF2635	0.53	+1.0
2,654,667	+		GFF2635	0.53	+0.4
2,654,685	+		GFF2635	0.54	-1.4
2,654,685	+		GFF2635	0.54	+0.3
2,654,693	-		GFF2635	0.55	+0.3
2,654,695	+		GFF2635	0.55	-0.2
2,654,695	-		GFF2635	0.55	-0.7
2,654,695	-		GFF2635	0.55	-0.1
2,654,697	+		GFF2635	0.55	-0.8
2,654,697	+		GFF2635	0.55	+1.4
2,654,717	+		GFF2635	0.56	-0.7
2,654,730	+		GFF2635	0.57	-0.4
2,654,730	+		GFF2635	0.57	-0.1
2,654,738	-		GFF2635	0.57	-1.1
2,654,738	-		GFF2635	0.57	-0.3
2,654,738	-		GFF2635	0.57	+0.4
2,654,744	+		GFF2635	0.58	-0.3
2,654,744	+		GFF2635	0.58	-2.4
2,654,791	+		GFF2635	0.61	+1.1
2,654,852	+		GFF2635	0.65	-2.3
2,654,852	+		GFF2635	0.65	-0.4
2,654,923	+		GFF2635	0.69	-0.6
2,654,938	+		GFF2635	0.70	-0.3
2,654,946	-		GFF2635	0.70	-0.5
2,654,946	-		GFF2635	0.70	+0.6
2,654,979	+		GFF2635	0.73	-1.9
2,654,987	-		GFF2635	0.73	-0.5
2,654,989	+		GFF2635	0.73	-0.7
2,654,989	+		GFF2635	0.73	-1.3
2,655,010	+		GFF2635	0.75	+0.2
2,655,015	+		GFF2635	0.75	-1.3
2,655,017	+		GFF2635	0.75	-0.1
2,655,017	+		GFF2635	0.75	-0.5
2,655,017	+		GFF2635	0.75	+1.0
2,655,017	+		GFF2635	0.75	+0.9
2,655,018	+		GFF2635	0.75	+0.3
2,655,018	+		GFF2635	0.75	-0.8
2,655,018	+		GFF2635	0.75	-1.2
2,655,018	+		GFF2635	0.75	-0.6
2,655,018	+		GFF2635	0.75	-3.4
2,655,018	+		GFF2635	0.75	-0.0
2,655,018	+		GFF2635	0.75	-1.3
2,655,018	+		GFF2635	0.75	+0.1
2,655,018	+		GFF2635	0.75	+0.5
2,655,018	+		GFF2635	0.75	-0.2
2,655,018	+		GFF2635	0.75	-0.9
2,655,018	+		GFF2635	0.75	-0.5
2,655,018	+		GFF2635	0.75	-0.7
2,655,018	+		GFF2635	0.75	-1.7
2,655,025	+		GFF2635	0.75	-2.3
2,655,025	-		GFF2635	0.75	+0.0
2,655,025	-		GFF2635	0.75	-0.1
2,655,025	-		GFF2635	0.75	-0.3
2,655,025	-		GFF2635	0.75	-0.5
2,655,025	-		GFF2635	0.75	+1.3
2,655,025	-		GFF2635	0.75	-0.0
2,655,025	-		GFF2635	0.75	-0.5
2,655,025	-		GFF2635	0.75	+0.1
2,655,025	-		GFF2635	0.75	-0.3
2,655,026	-		GFF2635	0.76	-1.0
2,655,026	-		GFF2635	0.76	+0.6
2,655,026	-		GFF2635	0.76	-1.1
2,655,026	-		GFF2635	0.76	-1.2
2,655,026	-		GFF2635	0.76	+0.1
2,655,026	-		GFF2635	0.76	+0.3
2,655,026	-		GFF2635	0.76	+0.4
2,655,026	-		GFF2635	0.76	+0.2
2,655,026	-		GFF2635	0.76	-0.5
2,655,026	-		GFF2635	0.76	-1.5
2,655,026	-		GFF2635	0.76	+0.8
2,655,026	-		GFF2635	0.76	-0.2
2,655,026	-		GFF2635	0.76	-0.6
2,655,026	-		GFF2635	0.76	+0.7
2,655,026	-		GFF2635	0.76	+1.5
2,655,026	-		GFF2635	0.76	+0.8
2,655,026	-		GFF2635	0.76	+0.7
2,655,026	-		GFF2635	0.76	-0.8
2,655,027	+		GFF2635	0.76	+0.0
2,655,035	-		GFF2635	0.76	-0.3
2,655,053	+		GFF2635	0.77	+0.2
2,655,103	-		GFF2635	0.80	+0.0
2,655,103	-		GFF2635	0.80	+0.1
2,655,124	+		GFF2635	0.82	-0.7
2,655,124	+		GFF2635	0.82	-1.1
2,655,132	-		GFF2635	0.82	+0.4
2,655,142	+		GFF2635	0.83	-0.3
2,655,147	-		GFF2635	0.83	+0.5
2,655,164	-		GFF2635	0.84	+0.1
2,655,174	+		GFF2635	0.85	+0.3
2,655,195	-		GFF2635	0.86	-1.0
2,655,206	+		GFF2635	0.87	+0.2
2,655,214	-		GFF2635	0.87	+0.9
2,655,217	+		GFF2635	0.88	+0.4
2,655,225	-		GFF2635	0.88	-0.0
2,655,225	-		GFF2635	0.88	-0.2
2,655,252	+		GFF2635	0.90	-1.2
2,655,261	+				+0.1
2,655,276	+				+0.8
2,655,290	+				+0.1
2,655,290	+				-0.2
2,655,308	-				+0.7
2,655,323	+				-0.7
2,655,343	+				+0.2
2,655,357	+				-0.5
2,655,367	+				+0.6
2,655,369	+				+0.0
2,655,370	-				-0.5
2,655,370	-				-1.3
2,655,375	-				-2.3
2,655,377	-				+0.5
2,655,387	+				+1.4
2,655,389	-				-1.5
2,655,389	-				+0.7
2,655,425	+				-0.7
2,655,425	+				-1.5
2,655,441	-				-0.3
2,655,474	-				+0.1
2,655,479	+				+1.6
2,655,554	-				+1.0
2,655,574	-				+0.4
2,655,591	-				-1.6
2,655,593	-				-0.5
2,655,612	+				+0.0
2,655,617	+				+0.7
2,655,618	+				-1.1
2,655,620	-				+0.6
2,655,623	+				-0.8
2,655,624	+				-1.1
2,655,626	-				+0.3
2,655,628	+				+0.3
2,655,631	-				+1.4
2,655,631	-				-2.0
2,655,631	-				-1.4
2,655,631	-				+1.0
2,655,632	-				-0.3
2,655,642	-				-0.4
2,655,667	+				-1.0
2,655,677	-				-2.6
2,655,682	+				-1.2
2,655,682	+				-0.2
2,655,690	-				-0.6
2,655,690	-				+0.0
2,655,704	-		GFF2636	0.10	+0.5
2,655,744	+		GFF2636	0.13	-1.7
2,655,753	-		GFF2636	0.14	-0.4
2,655,754	+		GFF2636	0.14	-0.6
2,655,762	-		GFF2636	0.14	-1.7
2,655,777	+		GFF2636	0.15	-0.0
2,655,796	+		GFF2636	0.17	-1.0
2,655,796	+		GFF2636	0.17	+2.0
2,655,815	+		GFF2636	0.18	-1.3
2,655,815	+		GFF2636	0.18	+0.5
2,655,879	-		GFF2636	0.23	-1.0
2,655,904	+		GFF2636	0.24	+0.7
2,655,904	+		GFF2636	0.24	+0.2
2,655,904	+		GFF2636	0.24	+1.2
2,655,907	+		GFF2636	0.25	+0.5
2,655,912	-		GFF2636	0.25	+0.5
2,655,912	-		GFF2636	0.25	-1.3
2,655,912	-		GFF2636	0.25	-1.5
2,655,912	-		GFF2636	0.25	+0.6
2,655,912	-		GFF2636	0.25	-1.3
2,655,917	-		GFF2636	0.25	-1.2
2,655,954	-		GFF2636	0.28	-0.2
2,655,958	+		GFF2636	0.28	+0.3
2,655,964	+		GFF2636	0.29	+0.3
2,655,972	-		GFF2636	0.29	-1.4
2,655,973	+		GFF2636	0.29	+0.5
2,655,981	-		GFF2636	0.30	+0.3
2,655,981	-		GFF2636	0.30	-1.8
2,655,981	-		GFF2636	0.30	-0.1
2,655,981	-		GFF2636	0.30	+0.5
2,656,006	+		GFF2636	0.32	+0.3
2,656,021	+		GFF2636	0.33	+0.1
2,656,029	-		GFF2636	0.33	-2.0
2,656,037	-		GFF2636	0.34	-1.7
2,656,037	-		GFF2636	0.34	+0.8
2,656,047	+		GFF2636	0.35	-0.7
2,656,078	+		GFF2636	0.37	+0.0
2,656,078	+		GFF2636	0.37	+1.0
2,656,080	-		GFF2636	0.37	-1.2
2,656,086	-		GFF2636	0.37	-0.9
2,656,086	-		GFF2636	0.37	-1.3
2,656,088	+		GFF2636	0.38	-1.1
2,656,091	-		GFF2636	0.38	+0.4
2,656,096	-		GFF2636	0.38	-0.4
2,656,096	-		GFF2636	0.38	-0.1
2,656,102	+		GFF2636	0.39	-1.6
2,656,110	-		GFF2636	0.39	+0.5
2,656,110	-		GFF2636	0.39	-0.4
2,656,127	-		GFF2636	0.40	-2.0
2,656,147	+		GFF2636	0.42	+0.1
2,656,201	-		GFF2636	0.46	+1.1
2,656,206	-		GFF2636	0.46	-0.3
2,656,208	+		GFF2636	0.46	+0.1
2,656,208	+		GFF2636	0.46	-0.3
2,656,208	+		GFF2636	0.46	-0.1
2,656,209	-		GFF2636	0.46	+0.1
2,656,216	-		GFF2636	0.47	-1.9
2,656,216	-		GFF2636	0.47	-0.2
2,656,254	-		GFF2636	0.49	-0.6
2,656,257	+		GFF2636	0.50	+0.9
2,656,262	-		GFF2636	0.50	-0.7
2,656,265	-		GFF2636	0.50	-0.1
2,656,265	-		GFF2636	0.50	-0.3
2,656,267	+		GFF2636	0.50	-0.3
2,656,274	+		GFF2636	0.51	-0.4
2,656,288	+		GFF2636	0.52	+0.7
2,656,288	+		GFF2636	0.52	+0.6
2,656,288	+		GFF2636	0.52	-0.1
2,656,288	+		GFF2636	0.52	+0.0
2,656,288	+		GFF2636	0.52	-1.0
2,656,288	+		GFF2636	0.52	-0.3
2,656,288	+		GFF2636	0.52	-1.3
2,656,288	+		GFF2636	0.52	-0.5
2,656,288	+		GFF2636	0.52	-1.1
2,656,296	-		GFF2636	0.52	-0.4
2,656,296	-		GFF2636	0.52	-0.6
2,656,296	-		GFF2636	0.52	+0.4
2,656,296	-		GFF2636	0.52	-1.8
2,656,296	-		GFF2636	0.52	+0.2
2,656,296	-		GFF2636	0.52	+0.2
2,656,296	-		GFF2636	0.52	+0.0
2,656,296	-		GFF2636	0.52	-0.4
2,656,296	-		GFF2636	0.52	-0.7
2,656,296	-		GFF2636	0.52	-2.1
2,656,296	-		GFF2636	0.52	+1.0
2,656,296	-		GFF2636	0.52	+0.8
2,656,301	+		GFF2636	0.53	+0.8
2,656,303	-		GFF2636	0.53	+1.3
2,656,310	+		GFF2636	0.53	+0.5
2,656,320	+		GFF2636	0.54	-1.1
2,656,334	-		GFF2636	0.55	-1.3
2,656,369	-		GFF2636	0.58	-0.1
2,656,375	+		GFF2636	0.58	-1.5
2,656,375	+		GFF2636	0.58	+0.1
2,656,375	+		GFF2636	0.58	+0.5
2,656,375	+		GFF2636	0.58	+0.7
2,656,383	-		GFF2636	0.59	-0.5
2,656,383	-		GFF2636	0.59	-0.2
2,656,383	-		GFF2636	0.59	+0.6
2,656,383	-		GFF2636	0.59	-0.3
2,656,383	-		GFF2636	0.59	-0.1
2,656,383	-		GFF2636	0.59	-1.1
2,656,386	-		GFF2636	0.59	+0.0
2,656,400	+		GFF2636	0.60	+1.1
2,656,400	+		GFF2636	0.60	-2.0
2,656,405	+		GFF2636	0.60	+1.1
2,656,405	+		GFF2636	0.60	+0.3
2,656,408	-		GFF2636	0.60	-1.2
2,656,469	+		GFF2636	0.65	-1.3
2,656,496	+		GFF2636	0.67	-1.1
2,656,535	-		GFF2636	0.70	+0.1
2,656,566	-		GFF2636	0.72	+0.2
2,656,571	+		GFF2636	0.72	+0.6
2,656,604	-		GFF2636	0.74	-2.0
2,656,609	-		GFF2636	0.75	+0.4
2,656,611	+		GFF2636	0.75	-0.0
2,656,611	+		GFF2636	0.75	+0.9
2,656,611	+		GFF2636	0.75	+2.1
2,656,614	-		GFF2636	0.75	+0.8
2,656,619	-		GFF2636	0.76	-0.3
2,656,659	+		GFF2636	0.78	-0.0
2,656,659	+		GFF2636	0.78	-0.5
2,656,659	+		GFF2636	0.78	+1.0
2,656,659	+		GFF2636	0.78	-0.9
2,656,659	+		GFF2636	0.78	+0.2
2,656,659	+		GFF2636	0.78	-0.1
2,656,667	-		GFF2636	0.79	-2.4
2,656,667	-		GFF2636	0.79	-2.2
2,656,667	-		GFF2636	0.79	+0.0
2,656,667	-		GFF2636	0.79	-1.2
2,656,667	-		GFF2636	0.79	-0.6
2,656,667	-		GFF2636	0.79	-0.7
2,656,669	+		GFF2636	0.79	-0.3
2,656,669	+		GFF2636	0.79	-0.6
2,656,679	+		GFF2636	0.80	-0.5
2,656,681	+		GFF2636	0.80	+0.0
2,656,712	-		GFF2636	0.82	-0.3
2,656,712	-		GFF2636	0.82	-1.0
2,656,740	+		GFF2636	0.84	-2.2
2,656,741	+		GFF2636	0.84	-0.9
2,656,742	-		GFF2636	0.84	-0.4
2,656,752	+		GFF2636	0.85	+1.4
2,656,757	+		GFF2636	0.85	-0.8
2,656,757	+		GFF2636	0.85	+0.0
2,656,757	+		GFF2636	0.85	-0.6
2,656,762	+		GFF2636	0.86	+0.9
2,656,762	+		GFF2636	0.86	-0.1
2,656,762	+		GFF2636	0.86	-1.1
2,656,762	+		GFF2636	0.86	-1.1
2,656,762	+		GFF2636	0.86	-1.5
2,656,762	+		GFF2636	0.86	+0.2
2,656,762	+		GFF2636	0.86	+0.7
2,656,765	-		GFF2636	0.86	+0.6
2,656,765	-		GFF2636	0.86	-2.0
2,656,770	-		GFF2636	0.86	-1.2
2,656,770	-		GFF2636	0.86	-1.4
2,656,770	-		GFF2636	0.86	+0.4
2,656,770	-		GFF2636	0.86	-0.1
2,656,770	-		GFF2636	0.86	-1.0
2,656,770	-		GFF2636	0.86	+0.3
2,656,770	-		GFF2636	0.86	+0.4
2,656,770	-		GFF2636	0.86	-1.4
2,656,792	+		GFF2636	0.88	-1.3
2,656,792	+		GFF2636	0.88	-0.9
2,656,797	+		GFF2636	0.88	+1.3
2,656,800	-		GFF2636	0.88	-1.1
2,656,808	+		GFF2636	0.89	-1.5
2,656,836	+				-1.2
2,656,842	+				-0.6
2,656,843	-				+1.1
2,656,844	-				+0.9
2,656,857	+				-1.7
2,656,867	+				-0.5
2,656,867	+				-0.2
2,656,867	+				-0.2
2,656,867	+				-0.0
2,656,867	+				+0.2
2,656,874	+				-0.1
2,656,875	-				+1.0
2,656,875	-				-0.6
2,656,875	-				+0.1
2,656,875	-				-1.4
2,656,875	-				-0.9
2,656,875	-				+0.4
2,656,937	+				-0.1
2,656,937	-				-0.3
2,656,945	-				-0.9
2,656,945	-				-0.8
2,656,945	-				-0.9
2,656,962	-				-0.1
2,656,964	+				+0.3
2,656,970	+				+0.6
2,656,972	-				-0.4
2,656,972	-				+1.6
2,656,978	-				+0.1
2,656,988	-				-0.4
2,657,020	+				-1.0
2,657,051	+				-0.8
2,657,051	+				-0.5
2,657,051	+				-0.8
2,657,059	-				+0.5
2,657,059	-				-0.5
2,657,086	-				-1.4
2,657,095	-				-0.7
2,657,102	+				+1.6
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