Strain Fitness in Sphingobium sp. HT1-2 around GFF2529

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,545,923	-		GFF2527	0.68	-0.2
2,546,013	-		GFF2527	0.85	+0.8
2,546,024	+		GFF2527	0.87	+0.8
2,546,029	+		GFF2527	0.88	+0.2
2,546,041	+				-1.3
2,546,043	+				+0.5
2,546,049	-				+1.4
2,546,051	-				+0.6
2,546,083	+				+0.8
2,546,096	+				+0.7
2,546,097	+				-0.9
2,546,097	-				-1.1
2,546,101	+				-0.7
2,546,104	-				+0.2
2,546,104	-				-0.3
2,546,104	-				-0.9
2,546,104	-				-0.8
2,546,106	+				+2.1
2,546,106	+				-0.4
2,546,107	+				-2.2
2,546,107	+				-1.4
2,546,107	+				+0.0
2,546,107	+				+1.0
2,546,107	+				-2.6
2,546,107	+				-0.9
2,546,107	+				+0.6
2,546,107	+				-0.5
2,546,114	+				+0.6
2,546,114	-				-0.4
2,546,115	-				-0.8
2,546,115	-				+0.1
2,546,115	-				-0.6
2,546,115	-				-1.1
2,546,115	-				-1.0
2,546,115	-				-1.9
2,546,115	-				+0.3
2,546,115	-				-1.5
2,546,117	+				-0.8
2,546,122	-				-0.2
2,546,122	-				+0.7
2,546,132	-				-0.2
2,546,180	+				-0.9
2,546,180	+				+0.1
2,546,180	+				+0.8
2,546,180	+				-0.9
2,546,185	+				-0.5
2,546,185	+				+0.4
2,546,188	-				+0.2
2,546,188	-				+0.6
2,546,188	-				-0.3
2,546,188	-				-1.1
2,546,188	-				-3.0
2,546,188	-				-0.2
2,546,190	+				-0.5
2,546,190	+				-0.9
2,546,190	+				+0.8
2,546,190	+				-2.2
2,546,190	+				-0.7
2,546,192	+				+0.7
2,546,193	-				-0.5
2,546,193	-				-0.0
2,546,193	-				-0.2
2,546,193	-				-2.0
2,546,193	-				-1.0
2,546,197	+				-0.1
2,546,197	+				-0.4
2,546,197	+				-1.9
2,546,197	+				+0.1
2,546,198	+				-0.2
2,546,198	+				+1.2
2,546,198	+				-0.4
2,546,198	+				+1.2
2,546,198	+				-0.4
2,546,198	-				-1.1
2,546,198	-				+0.6
2,546,198	-				-1.4
2,546,198	-				-0.1
2,546,198	-				+0.2
2,546,198	-				+0.8
2,546,198	-				-0.9
2,546,200	-				-1.4
2,546,200	-				-1.1
2,546,206	-				-0.9
2,546,206	-				+0.3
2,546,206	-				-1.5
2,546,206	-				+0.5
2,546,211	+				+0.3
2,546,259	+				+0.6
2,546,268	-				+0.6
2,546,275	+				+1.6
2,546,278	-				-0.4
2,546,297	+				-0.7
2,546,316	+		GFF2528	0.18	+0.3
2,546,316	+		GFF2528	0.18	-1.4
2,546,323	-		GFF2528	0.22	-0.5
2,546,350	+		GFF2528	0.37	+1.2
2,546,357	+		GFF2528	0.41	-1.6
2,546,357	+		GFF2528	0.41	+0.8
2,546,358	-		GFF2528	0.42	-1.7
2,546,365	-		GFF2528	0.46	-0.1
2,546,396	-		GFF2528	0.63	-1.2
2,546,401	+		GFF2528	0.66	+0.0
2,546,433	+		GFF2528	0.83	-0.2
2,546,441	-		GFF2528	0.88	-0.9
2,546,447	-				-0.4
2,546,447	-				-0.6
2,546,447	-				-0.4
2,546,490	+				+0.5
2,546,521	+				+0.2
2,546,556	+				-1.5
2,546,580	+				+0.3
2,546,589	-				-1.2
2,546,589	-				+0.4
2,546,612	-				+0.2
2,546,620	+				-0.4
2,546,622	-				-1.0
2,546,622	-				-0.0
2,546,627	+				+0.7
2,546,635	-				+0.5
2,546,635	-				-0.0
2,546,662	+				+0.0
2,546,670	-				-0.2
2,546,670	-				-0.5
2,546,689	-				-1.2
2,546,727	+				-2.6
2,546,727	+				-0.6
2,546,727	+				-0.2
2,546,727	+				-1.9
2,546,727	+				+1.1
2,546,727	+				-0.4
2,546,727	+				-0.9
2,546,727	+				+0.5
2,546,735	-				+0.6
2,546,735	-				+0.1
2,546,735	-				+0.1
2,546,735	-				-2.1
2,546,735	-				-0.6
2,546,735	-				-0.1
2,546,735	-				-0.4
2,546,740	-				-1.1
2,546,745	-				+0.6
2,546,772	+				-0.8
2,546,780	-				-0.1
2,546,782	+				-0.2
2,546,826	-				-0.3
2,546,838	+				+1.7
2,546,839	-				-0.0
2,546,850	+				+0.2
2,546,890	+				-2.4
2,546,890	+				+0.7
2,546,894	-				+0.8
2,546,904	+				+0.9
2,546,912	-				-1.3
2,546,973	-				-0.2
2,546,980	-				-2.3
2,546,981	-				-1.6
2,546,985	+				-0.1
2,547,019	-				+0.7
2,547,021	+				-0.2
2,547,031	-				+0.8
2,547,045	+		GFF2529	0.10	+0.4
2,547,045	+		GFF2529	0.10	-2.4
2,547,069	-		GFF2529	0.12	-1.2
2,547,069	-		GFF2529	0.12	+0.2
2,547,092	-		GFF2529	0.14	+1.2
2,547,092	-		GFF2529	0.14	-1.2
2,547,105	+		GFF2529	0.15	-1.1
2,547,108	+		GFF2529	0.15	+0.7
2,547,116	-		GFF2529	0.16	-2.0
2,547,116	-		GFF2529	0.16	+0.0
2,547,116	-		GFF2529	0.16	+1.0
2,547,125	-		GFF2529	0.16	-0.6
2,547,125	-		GFF2529	0.16	+0.0
2,547,125	-		GFF2529	0.16	+0.3
2,547,125	-		GFF2529	0.16	+0.2
2,547,161	-		GFF2529	0.19	+0.4
2,547,161	-		GFF2529	0.19	+0.3
2,547,169	-		GFF2529	0.20	-0.4
2,547,169	-		GFF2529	0.20	-1.8
2,547,285	-		GFF2529	0.29	+1.4
2,547,291	-		GFF2529	0.29	+1.2
2,547,302	-		GFF2529	0.30	+0.4
2,547,302	-		GFF2529	0.30	-0.6
2,547,304	-		GFF2529	0.30	-2.8
2,547,312	+		GFF2529	0.31	+1.0
2,547,312	+		GFF2529	0.31	-2.7
2,547,314	-		GFF2529	0.31	-1.8
2,547,320	-		GFF2529	0.32	-0.1
2,547,340	+		GFF2529	0.33	-0.2
2,547,345	+		GFF2529	0.33	+1.3
2,547,345	+		GFF2529	0.33	-1.9
2,547,359	+		GFF2529	0.35	-0.4
2,547,359	+		GFF2529	0.35	-0.7
2,547,359	+		GFF2529	0.35	-0.9
2,547,367	-		GFF2529	0.35	-0.5
2,547,369	+		GFF2529	0.35	-2.0
2,547,375	+		GFF2529	0.36	-1.6
2,547,377	-		GFF2529	0.36	-1.4
2,547,393	+		GFF2529	0.37	-1.9
2,547,398	+		GFF2529	0.38	-2.2
2,547,398	+		GFF2529	0.38	-1.0
2,547,398	+		GFF2529	0.38	+0.2
2,547,398	+		GFF2529	0.38	-0.2
2,547,398	+		GFF2529	0.38	-1.5
2,547,401	-		GFF2529	0.38	+0.0
2,547,405	-		GFF2529	0.38	+0.0
2,547,406	-		GFF2529	0.38	-1.2
2,547,406	-		GFF2529	0.38	-0.3
2,547,406	-		GFF2529	0.38	+0.1
2,547,406	-		GFF2529	0.38	-0.4
2,547,406	-		GFF2529	0.38	-1.5
2,547,439	+		GFF2529	0.41	+0.3
2,547,447	-		GFF2529	0.41	+0.3
2,547,482	-		GFF2529	0.44	+0.9
2,547,487	+		GFF2529	0.45	-2.0
2,547,537	+		GFF2529	0.48	+0.7
2,547,544	+		GFF2529	0.49	-2.1
2,547,561	+		GFF2529	0.50	-0.1
2,547,572	+		GFF2529	0.51	+0.9
2,547,577	+		GFF2529	0.52	+0.2
2,547,583	+		GFF2529	0.52	+0.8
2,547,583	+		GFF2529	0.52	-0.8
2,547,583	+		GFF2529	0.52	+0.2
2,547,583	+		GFF2529	0.52	-0.0
2,547,583	+		GFF2529	0.52	+0.2
2,547,583	+		GFF2529	0.52	+0.4
2,547,583	+		GFF2529	0.52	-0.5
2,547,583	+		GFF2529	0.52	+0.1
2,547,583	+		GFF2529	0.52	+0.2
2,547,583	+		GFF2529	0.52	+0.5
2,547,583	+		GFF2529	0.52	-1.2
2,547,591	-		GFF2529	0.53	-0.7
2,547,591	-		GFF2529	0.53	+0.1
2,547,591	-		GFF2529	0.53	+0.1
2,547,591	-		GFF2529	0.53	+0.6
2,547,591	-		GFF2529	0.53	-0.2
2,547,591	-		GFF2529	0.53	-0.5
2,547,591	-		GFF2529	0.53	-1.5
2,547,591	-		GFF2529	0.53	-1.8
2,547,591	-		GFF2529	0.53	+0.8
2,547,605	+		GFF2529	0.54	+1.1
2,547,605	+		GFF2529	0.54	-1.5
2,547,605	+		GFF2529	0.54	-1.2
2,547,613	-		GFF2529	0.54	-1.4
2,547,639	+		GFF2529	0.56	+0.7
2,547,639	+		GFF2529	0.56	+0.0
2,547,666	+		GFF2529	0.59	+1.4
2,547,666	+		GFF2529	0.59	+0.8
2,547,674	-		GFF2529	0.59	-1.2
2,547,674	-		GFF2529	0.59	-1.0
2,547,674	-		GFF2529	0.59	+0.2
2,547,686	+		GFF2529	0.60	+0.8
2,547,687	+		GFF2529	0.60	-0.8
2,547,688	+		GFF2529	0.60	-0.2
2,547,692	+		GFF2529	0.61	-1.4
2,547,695	-		GFF2529	0.61	-0.0
2,547,754	+		GFF2529	0.65	+0.5
2,547,754	+		GFF2529	0.65	-0.4
2,547,754	+		GFF2529	0.65	-0.2
2,547,754	+		GFF2529	0.65	-0.8
2,547,754	+		GFF2529	0.65	-0.2
2,547,754	+		GFF2529	0.65	-0.9
2,547,754	+		GFF2529	0.65	-0.2
2,547,754	+		GFF2529	0.65	-0.2
2,547,754	+		GFF2529	0.65	-0.2
2,547,754	+		GFF2529	0.65	-1.1
2,547,762	-		GFF2529	0.66	+0.6
2,547,762	-		GFF2529	0.66	-0.6
2,547,762	-		GFF2529	0.66	+1.7
2,547,762	-		GFF2529	0.66	-2.5
2,547,762	-		GFF2529	0.66	+0.4
2,547,762	-		GFF2529	0.66	-0.5
2,547,792	+		GFF2529	0.68	-1.3
2,547,824	+		GFF2529	0.71	+0.8
2,547,831	-		GFF2529	0.71	-1.0
2,547,842	+		GFF2529	0.72	-1.6
2,547,844	+		GFF2529	0.72	+0.3
2,547,849	+		GFF2529	0.73	-0.9
2,547,849	+		GFF2529	0.73	-2.4
2,547,866	+		GFF2529	0.74	-1.2
2,547,868	+		GFF2529	0.74	+0.0
2,547,870	-		GFF2529	0.74	-0.8
2,547,876	+		GFF2529	0.75	-0.2
2,547,876	+		GFF2529	0.75	+0.1
2,547,884	-		GFF2529	0.76	-2.3
2,547,884	-		GFF2529	0.76	-1.2
2,547,884	-		GFF2529	0.76	-1.5
2,547,884	-		GFF2529	0.76	+0.2
2,547,884	-		GFF2529	0.76	-1.2
2,547,885	+		GFF2529	0.76	-0.4
2,547,924	+		GFF2529	0.79	-0.4
2,547,924	+		GFF2529	0.79	+1.1
2,547,932	-		GFF2529	0.79	-0.6
2,547,932	-		GFF2529	0.79	-1.9
2,547,966	+		GFF2529	0.82	-1.2
2,547,981	+		GFF2529	0.83	+1.8
2,547,983	-		GFF2529	0.83	+0.0
2,547,984	-		GFF2529	0.83	-0.6
2,547,991	+		GFF2529	0.84	-0.5
2,547,991	+		GFF2529	0.84	-0.1
2,547,991	+		GFF2529	0.84	-0.1
2,547,991	+		GFF2529	0.84	-0.9
2,547,999	-		GFF2529	0.85	-1.8
2,547,999	-		GFF2529	0.85	-0.6
2,547,999	-		GFF2529	0.85	+0.2
2,547,999	-		GFF2529	0.85	+0.7
2,547,999	-		GFF2529	0.85	-1.1
2,547,999	-		GFF2529	0.85	+0.4
2,547,999	-		GFF2529	0.85	+0.1
2,547,999	-		GFF2529	0.85	+1.0
2,547,999	-		GFF2529	0.85	-0.1
2,547,999	-		GFF2529	0.85	-1.5
2,547,999	-		GFF2529	0.85	+0.4
2,548,011	-		GFF2529	0.85	+1.3
2,548,029	-		GFF2529	0.87	-1.4
2,548,037	+		GFF2529	0.88	-0.3
2,548,037	+		GFF2529	0.88	-2.5
2,548,037	+		GFF2529	0.88	+0.1
2,548,045	-		GFF2529	0.88	+0.8
2,548,045	-		GFF2529	0.88	-1.1
2,548,045	-		GFF2529	0.88	-0.4
2,548,057	+		GFF2529	0.89	-0.7
2,548,065	-		GFF2529	0.90	-0.0
2,548,103	+				-0.3
2,548,109	+				+0.6
2,548,123	+				-0.4
2,548,130	+				+0.2
2,548,171	-				-0.5
2,548,205	+				-0.3
2,548,206	-				-0.1
2,548,213	-				-0.7
2,548,213	-				+0.8
2,548,223	-				-0.2
2,548,234	-				-0.8
2,548,254	+				-0.1
2,548,254	+				+0.8
2,548,254	+				-0.1
2,548,254	+				-0.6
2,548,254	+				+0.1
2,548,256	+				+0.5
2,548,256	+				-1.3
2,548,256	+				+0.1
2,548,256	+				+0.3
2,548,256	+				+1.9
2,548,256	+				-0.9
2,548,256	+				-0.5
2,548,256	+				-0.6
2,548,262	-				-0.7
2,548,262	-				-0.4
2,548,262	-				+0.0
2,548,262	-				+0.8
2,548,262	-				+0.8
2,548,262	-				-1.9
2,548,262	-				-0.9
2,548,264	-				-1.5
2,548,264	-				-0.8
2,548,264	-				+0.8
2,548,264	-				-2.4
2,548,264	-				-0.7
2,548,279	+				+0.4
2,548,279	+				+1.0
2,548,282	-				+0.1
2,548,287	-				-1.8
2,548,318	-				-0.6
2,548,345	-				-0.2
2,548,454	-				+0.5
2,548,493	-				-2.2
2,548,517	+				-0.1
2,548,528	-				-0.8
2,548,535	+				-1.1
2,548,535	+				-0.6
2,548,545	+		GFF2531	0.12	+0.2
2,548,557	+		GFF2531	0.14	-0.7
2,548,557	+		GFF2531	0.14	+0.4
2,548,562	+		GFF2531	0.15	+0.2
2,548,563	+		GFF2531	0.16	-0.7
2,548,569	+		GFF2531	0.17	+0.1
2,548,575	-		GFF2531	0.18	+0.6
2,548,576	-		GFF2531	0.18	+0.6
2,548,596	+		GFF2531	0.22	-0.1
2,548,596	+		GFF2531	0.22	+1.0
2,548,596	+		GFF2531	0.22	-2.0
2,548,596	+		GFF2531	0.22	-0.4
2,548,604	-		GFF2531	0.24	+1.3
2,548,604	-		GFF2531	0.24	+0.0
2,548,611	+		GFF2531	0.26	+0.1
2,548,611	+		GFF2531	0.26	-0.1
2,548,617	-		GFF2531	0.27	-0.5
2,548,619	-		GFF2531	0.27	+0.4
2,548,636	+		GFF2531	0.31	-0.2
2,548,644	-		GFF2531	0.32	+2.0
2,548,644	-		GFF2531	0.32	-0.8
2,548,658	+		GFF2531	0.35	-0.9
2,548,658	+		GFF2531	0.35	-0.6
2,548,661	-		GFF2531	0.36	+0.4
2,548,665	-		GFF2531	0.37	+0.7
2,548,665	-		GFF2531	0.37	+1.1
2,548,666	-		GFF2531	0.37	+1.1
2,548,674	+		GFF2531	0.38	+0.2
2,548,675	+		GFF2531	0.39	-0.9
2,548,675	+		GFF2531	0.39	+0.6
2,548,698	+		GFF2531	0.43	-0.5
2,548,698	+		GFF2531	0.43	-0.4
2,548,698	+		GFF2531	0.43	+0.4
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