Strain Fitness in Sphingobium sp. HT1-2 around GFF2468

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,490,585	+				-0.0
2,490,585	+				+0.7
2,490,585	+				-1.6
2,490,585	+				-0.4
2,490,585	+				-0.2
2,490,585	+				+0.9
2,490,585	+				-1.6
2,490,593	-				-0.5
2,490,593	-				+0.2
2,490,593	-				-0.2
2,490,593	-				-0.8
2,490,593	-				-0.4
2,490,593	-				-1.2
2,490,593	-				+0.3
2,490,593	-				+0.6
2,490,593	-				+0.7
2,490,593	-				+1.2
2,490,593	-				-2.4
2,490,603	-				-1.6
2,490,608	-				+0.8
2,490,631	+				-0.9
2,490,651	+				-0.1
2,490,678	+				-1.6
2,490,684	+		GFF2467	0.10	-0.8
2,490,684	+		GFF2467	0.10	-1.4
2,490,694	+		GFF2467	0.11	+0.9
2,490,700	+		GFF2467	0.12	+0.4
2,490,702	-		GFF2467	0.12	+1.0
2,490,746	-		GFF2467	0.17	-2.1
2,490,754	+		GFF2467	0.18	+1.1
2,490,757	-		GFF2467	0.18	-0.9
2,490,759	+		GFF2467	0.18	-2.6
2,490,759	+		GFF2467	0.18	-0.7
2,490,767	-		GFF2467	0.19	+0.9
2,490,767	-		GFF2467	0.19	-0.4
2,490,767	-		GFF2467	0.19	-1.5
2,490,767	-		GFF2467	0.19	-0.2
2,490,795	+		GFF2467	0.22	-1.6
2,490,795	+		GFF2467	0.22	+0.2
2,490,795	+		GFF2467	0.22	-0.1
2,490,795	+		GFF2467	0.22	-1.9
2,490,802	-		GFF2467	0.23	-0.2
2,490,803	-		GFF2467	0.23	-0.0
2,490,803	-		GFF2467	0.23	+0.5
2,490,803	-		GFF2467	0.23	+0.8
2,490,803	-		GFF2467	0.23	+0.1
2,490,805	+		GFF2467	0.23	-0.5
2,490,813	-		GFF2467	0.24	-1.5
2,490,863	-		GFF2467	0.29	+0.3
2,490,869	-		GFF2467	0.30	-0.5
2,490,890	+		GFF2467	0.32	-2.0
2,490,890	+		GFF2467	0.32	+0.6
2,490,898	-		GFF2467	0.33	+0.1
2,490,907	-		GFF2467	0.34	-0.3
2,490,907	-		GFF2467	0.34	+1.2
2,490,909	+		GFF2467	0.34	+0.8
2,490,909	+		GFF2467	0.34	+0.8
2,490,909	+		GFF2467	0.34	+0.3
2,490,909	+		GFF2467	0.34	-2.2
2,490,909	+		GFF2467	0.34	+0.8
2,490,909	+		GFF2467	0.34	+0.2
2,490,909	+		GFF2467	0.34	+0.8
2,490,909	+		GFF2467	0.34	+1.2
2,490,909	+		GFF2467	0.34	+1.0
2,490,909	+		GFF2467	0.34	+0.5
2,490,917	-		GFF2467	0.35	-0.8
2,490,917	-		GFF2467	0.35	-0.8
2,490,917	-		GFF2467	0.35	+1.2
2,490,917	-		GFF2467	0.35	+0.4
2,490,917	-		GFF2467	0.35	+0.7
2,490,920	+		GFF2467	0.35	-0.0
2,490,922	-		GFF2467	0.35	+0.2
2,490,938	-		GFF2467	0.37	-2.2
2,490,947	-		GFF2467	0.38	+0.8
2,490,964	-		GFF2467	0.40	+0.9
2,490,967	+		GFF2467	0.40	+1.1
2,490,975	-		GFF2467	0.41	+0.2
2,490,996	+		GFF2467	0.43	-1.3
2,491,004	+		GFF2467	0.44	-1.8
2,491,020	-		GFF2467	0.46	-1.8
2,491,037	-		GFF2467	0.47	-2.2
2,491,037	-		GFF2467	0.47	-1.7
2,491,041	-		GFF2467	0.48	-2.0
2,491,079	-		GFF2467	0.52	-0.3
2,491,085	-		GFF2467	0.52	-1.2
2,491,085	-		GFF2467	0.52	-1.6
2,491,085	-		GFF2467	0.52	-0.8
2,491,087	+		GFF2467	0.53	-1.3
2,491,105	+		GFF2467	0.54	-1.8
2,491,105	+		GFF2467	0.54	-1.3
2,491,115	+		GFF2467	0.56	-1.8
2,491,119	+		GFF2467	0.56	-2.0
2,491,126	-		GFF2467	0.57	-3.2
2,491,126	-		GFF2467	0.57	-3.4
2,491,126	-		GFF2467	0.57	-2.1
2,491,126	-		GFF2467	0.57	-0.2
2,491,131	-		GFF2467	0.57	-2.5
2,491,131	-		GFF2467	0.57	-2.8
2,491,131	-		GFF2467	0.57	-2.6
2,491,131	-		GFF2467	0.57	-2.5
2,491,142	+		GFF2467	0.58	-1.8
2,491,168	+		GFF2467	0.61	-2.0
2,491,168	+		GFF2467	0.61	-1.8
2,491,173	+		GFF2467	0.62	-2.3
2,491,183	-		GFF2467	0.63	-1.2
2,491,214	-		GFF2467	0.66	-0.8
2,491,236	-		GFF2467	0.68	-1.9
2,491,287	+		GFF2467	0.74	-0.3
2,491,310	-		GFF2467	0.76	-1.2
2,491,326	+		GFF2467	0.78	-2.5
2,491,328	+		GFF2467	0.78	-1.5
2,491,328	+		GFF2467	0.78	-1.6
2,491,336	+		GFF2467	0.79	-1.9
2,491,343	+		GFF2467	0.79	-1.8
2,491,343	+		GFF2467	0.79	-1.8
2,491,343	+		GFF2467	0.79	-2.4
2,491,343	+		GFF2467	0.79	-1.2
2,491,343	+		GFF2467	0.79	-1.6
2,491,343	+		GFF2467	0.79	-1.9
2,491,343	+		GFF2467	0.79	+0.0
2,491,343	+		GFF2467	0.79	-1.5
2,491,351	-		GFF2467	0.80	-1.6
2,491,351	-		GFF2467	0.80	-2.3
2,491,351	-		GFF2467	0.80	-1.9
2,491,351	-		GFF2467	0.80	-2.1
2,491,351	-		GFF2467	0.80	-1.6
2,491,351	-		GFF2467	0.80	-2.3
2,491,351	-		GFF2467	0.80	-2.6
2,491,351	-		GFF2467	0.80	-2.8
2,491,351	-		GFF2467	0.80	-2.3
2,491,352	+		GFF2467	0.80	-1.9
2,491,359	-		GFF2467	0.81	-1.8
2,491,361	-		GFF2467	0.81	-0.3
2,491,363	+		GFF2467	0.82	-3.5
2,491,379	+		GFF2467	0.83	-1.2
2,491,404	-		GFF2467	0.86	-1.7
2,491,410	-		GFF2467	0.87	-2.2
2,491,462	+				-2.0
2,491,465	+				-1.3
2,491,470	+				-1.2
2,491,475	+				-3.2
2,491,556	+				+0.4
2,491,556	+				-0.7
2,491,561	+				-0.6
2,491,566	+				-0.7
2,491,574	-				-0.4
2,491,574	-				-1.7
2,491,574	-				-1.5
2,491,612	+				-2.1
2,491,617	+				-2.2
2,491,617	+				-0.8
2,491,620	-				-0.0
2,491,625	-				-1.3
2,491,625	-				-1.8
2,491,625	-				-1.5
2,491,625	-				-0.6
2,491,627	+				-1.5
2,491,627	+				-1.2
2,491,627	+				-1.3
2,491,627	+				-1.2
2,491,635	-				-1.9
2,491,635	-				-2.2
2,491,635	-				-1.5
2,491,635	-				-3.5
2,491,640	-				-2.0
2,491,671	+				-2.6
2,491,673	-		GFF2468	0.10	-2.2
2,491,741	-		GFF2468	0.16	-1.0
2,491,751	+		GFF2468	0.17	-2.6
2,491,759	-		GFF2468	0.18	-2.7
2,491,783	+		GFF2468	0.20	-2.3
2,491,783	+		GFF2468	0.20	-2.4
2,491,789	-		GFF2468	0.21	-2.0
2,491,791	-		GFF2468	0.21	-1.8
2,491,823	+		GFF2468	0.24	-1.5
2,491,823	-		GFF2468	0.24	-0.8
2,491,831	-		GFF2468	0.24	-1.3
2,491,832	+		GFF2468	0.25	-2.8
2,491,906	+		GFF2468	0.31	-1.5
2,491,906	+		GFF2468	0.31	-2.1
2,491,906	+		GFF2468	0.31	-2.2
2,491,923	+		GFF2468	0.33	-2.2
2,491,926	-		GFF2468	0.33	+0.2
2,491,933	+		GFF2468	0.34	-2.5
2,491,933	+		GFF2468	0.34	-0.9
2,491,941	-		GFF2468	0.35	-4.2
2,491,960	+		GFF2468	0.36	-2.9
2,492,010	+		GFF2468	0.41	-2.3
2,492,043	-		GFF2468	0.44	-2.2
2,492,059	+		GFF2468	0.45	-1.6
2,492,067	-		GFF2468	0.46	-2.1
2,492,069	+		GFF2468	0.46	-1.2
2,492,069	+		GFF2468	0.46	-2.2
2,492,077	+		GFF2468	0.47	-2.8
2,492,085	-		GFF2468	0.48	-2.8
2,492,100	+		GFF2468	0.49	-2.8
2,492,108	-		GFF2468	0.50	-3.2
2,492,125	+		GFF2468	0.51	-2.0
2,492,133	-		GFF2468	0.52	+0.2
2,492,133	-		GFF2468	0.52	-1.5
2,492,133	-		GFF2468	0.52	-1.1
2,492,133	-		GFF2468	0.52	-1.5
2,492,133	-		GFF2468	0.52	-0.6
2,492,133	-		GFF2468	0.52	-1.2
2,492,133	-		GFF2468	0.52	-2.7
2,492,155	-		GFF2468	0.54	-2.2
2,492,157	+		GFF2468	0.54	-0.5
2,492,162	+		GFF2468	0.55	-2.0
2,492,162	+		GFF2468	0.55	-2.2
2,492,197	-		GFF2468	0.58	-1.2
2,492,197	-		GFF2468	0.58	-2.3
2,492,208	+		GFF2468	0.59	-1.2
2,492,216	-		GFF2468	0.60	-1.3
2,492,244	-		GFF2468	0.62	-1.6
2,492,261	+		GFF2468	0.64	-1.7
2,492,268	+		GFF2468	0.64	-1.7
2,492,268	+		GFF2468	0.64	-2.8
2,492,276	-		GFF2468	0.65	-2.9
2,492,276	-		GFF2468	0.65	-2.2
2,492,305	+		GFF2468	0.68	-3.3
2,492,309	+		GFF2468	0.68	-1.2
2,492,317	-		GFF2468	0.69	-1.5
2,492,346	-		GFF2468	0.72	-1.3
2,492,420	+		GFF2468	0.78	-2.0
2,492,439	-		GFF2468	0.80	-2.8
2,492,446	-		GFF2468	0.81	-2.0
2,492,487	+		GFF2468	0.84	-2.4
2,492,487	+		GFF2468	0.84	-1.8
2,492,487	+		GFF2468	0.84	-2.2
2,492,495	-		GFF2468	0.85	-2.2
2,492,495	-		GFF2468	0.85	-1.8
2,492,515	-		GFF2468	0.87	-2.8
2,492,563	+				-2.1
2,492,563	+				-1.8
2,492,563	+				-1.6
2,492,563	+				-1.3
2,492,563	+				-2.4
2,492,563	+				-0.7
2,492,563	+				-1.8
2,492,571	-				-0.5
2,492,571	-				-2.5
2,492,571	-				-0.8
2,492,571	-				-1.6
2,492,571	-				-1.9
2,492,571	-				-1.7
2,492,571	-				-2.9
2,492,576	-				-0.7
2,492,576	-				-1.5
2,492,588	+				-2.6
2,492,588	+				-2.7
2,492,588	+				-3.6
2,492,613	+				-1.8
2,492,613	+				-2.5
2,492,617	+				-1.3
2,492,623	+				-1.8
2,492,634	+				-2.2
2,492,659	+				-1.5
2,492,661	+				-1.7
2,492,664	+				+1.4
2,492,667	-				-1.1
2,492,667	-				-0.1
2,492,667	-				+0.7
2,492,672	-				+0.2
2,492,672	-				+0.6
2,492,683	+				-0.4
2,492,683	+				-1.6
2,492,705	+				+0.7
2,492,705	+				-1.3
2,492,705	+				-1.8
2,492,705	+				-0.1
2,492,713	-				+1.0
2,492,713	-				-1.8
2,492,727	-				-1.5
2,492,731	-				+0.3
2,492,740	+				-1.3
2,492,746	+				+0.6
2,492,747	+				+0.3
2,492,751	+				-0.4
2,492,761	-				-0.3
2,492,761	-				-1.4
2,492,763	+				+0.7
2,492,763	+				+0.3
2,492,763	+				-0.3
2,492,763	+				-0.1
2,492,763	+				+0.4
2,492,763	+				+0.6
2,492,763	+				-1.0
2,492,763	+				-1.1
2,492,763	+				+1.7
2,492,763	+				+1.1
2,492,763	+				-1.3
2,492,763	+				+0.4
2,492,763	+				-0.8
2,492,764	-				-1.3
2,492,771	-				-0.3
2,492,771	-				-1.3
2,492,771	-				-0.5
2,492,771	-				-2.0
2,492,771	-				+0.8
2,492,771	-				-0.0
2,492,771	-				-1.5
2,492,771	-				-0.7
2,492,771	-				+1.0
2,492,771	-				+0.5
2,492,771	-				+0.2
2,492,771	-				-1.3
2,492,771	-				-1.5
2,492,771	-				+0.7
2,492,771	-				+0.4
2,492,771	-				+1.2
2,492,771	-				-0.8
2,492,771	-				+0.1
2,492,771	-				-0.7
2,492,771	-				-0.4
2,492,771	-				+0.4
2,492,778	-				-2.1
2,492,794	-				+0.3
2,492,802	+				+0.5
2,492,802	-				-0.6
2,492,809	+				-1.3
2,492,812	-				-0.3
2,492,817	-				-1.7
2,492,851	+				+0.1
2,492,851	+				-0.5
2,492,909	+				-0.9
2,492,923	+				-0.9
2,492,923	+				+0.0
2,492,923	+				+0.1
2,492,928	+				-0.5
2,492,928	+				+0.4
2,492,928	+				-2.3
2,492,928	+				-1.3
2,492,970	+				-0.8
2,492,994	+		GFF2469	0.11	-0.2
2,492,994	+		GFF2469	0.11	-1.5
2,493,038	+		GFF2469	0.14	+1.1
2,493,144	+		GFF2469	0.22	-0.8
2,493,199	+		GFF2469	0.27	-1.1
2,493,199	+		GFF2469	0.27	-1.7
2,493,481	+		GFF2469	0.48	-0.2
2,493,486	+		GFF2469	0.49	-2.0
2,493,486	+		GFF2469	0.49	-1.5
2,493,486	+		GFF2469	0.49	-0.6