Strain Fitness in Sphingobium sp. HT1-2 around GFF2456

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,477,097	-		GFF2455	0.11	+0.7
2,477,097	-		GFF2455	0.11	+0.9
2,477,099	-		GFF2455	0.12	-2.2
2,477,122	-		GFF2455	0.14	-0.8
2,477,133	-		GFF2455	0.15	+0.4
2,477,136	+		GFF2455	0.15	+0.2
2,477,144	-		GFF2455	0.16	-1.3
2,477,152	-		GFF2455	0.16	+0.5
2,477,178	-		GFF2455	0.19	-1.2
2,477,186	+		GFF2455	0.19	+1.5
2,477,191	+		GFF2455	0.20	-1.8
2,477,196	+		GFF2455	0.20	+1.1
2,477,199	-		GFF2455	0.21	+1.0
2,477,211	+		GFF2455	0.22	+0.2
2,477,243	+		GFF2455	0.25	-0.5
2,477,243	+		GFF2455	0.25	-0.6
2,477,248	+		GFF2455	0.25	+1.1
2,477,251	-		GFF2455	0.25	-0.0
2,477,256	-		GFF2455	0.26	+0.4
2,477,261	-		GFF2455	0.26	-0.2
2,477,281	-		GFF2455	0.28	+0.6
2,477,282	+		GFF2455	0.28	+0.2
2,477,290	-		GFF2455	0.29	-0.5
2,477,290	-		GFF2455	0.29	-1.5
2,477,307	+		GFF2455	0.30	+0.2
2,477,312	+		GFF2455	0.31	+1.2
2,477,312	+		GFF2455	0.31	+1.0
2,477,312	+		GFF2455	0.31	-0.1
2,477,312	+		GFF2455	0.31	+0.5
2,477,315	-		GFF2455	0.31	+0.5
2,477,321	+		GFF2455	0.32	+0.2
2,477,352	-		GFF2455	0.34	+0.4
2,477,388	+		GFF2455	0.38	+0.9
2,477,388	+		GFF2455	0.38	+1.0
2,477,394	+		GFF2455	0.38	-0.0
2,477,396	-		GFF2455	0.38	+0.9
2,477,402	-		GFF2455	0.39	-0.0
2,477,434	-		GFF2455	0.42	-1.6
2,477,456	+		GFF2455	0.44	+1.2
2,477,466	+		GFF2455	0.45	+0.8
2,477,466	+		GFF2455	0.45	-0.5
2,477,466	+		GFF2455	0.45	-0.2
2,477,466	+		GFF2455	0.45	-1.3
2,477,466	+		GFF2455	0.45	+1.3
2,477,466	+		GFF2455	0.45	-1.0
2,477,466	+		GFF2455	0.45	-0.4
2,477,466	+		GFF2455	0.45	-1.3
2,477,474	-		GFF2455	0.45	-0.3
2,477,474	-		GFF2455	0.45	+2.4
2,477,474	-		GFF2455	0.45	+0.1
2,477,474	-		GFF2455	0.45	+0.8
2,477,509	-		GFF2455	0.49	+0.5
2,477,515	-		GFF2455	0.49	+0.2
2,477,516	-		GFF2455	0.49	+0.3
2,477,519	-		GFF2455	0.50	-0.3
2,477,519	-		GFF2455	0.50	+1.4
2,477,522	+		GFF2455	0.50	-0.1
2,477,526	-		GFF2455	0.50	-0.2
2,477,537	+		GFF2455	0.51	+0.0
2,477,542	+		GFF2455	0.52	-3.2
2,477,547	+		GFF2455	0.52	+0.9
2,477,547	+		GFF2455	0.52	-0.7
2,477,547	+		GFF2455	0.52	+0.0
2,477,547	+		GFF2455	0.52	-0.2
2,477,547	+		GFF2455	0.52	-1.0
2,477,547	+		GFF2455	0.52	+0.8
2,477,547	+		GFF2455	0.52	+2.2
2,477,547	+		GFF2455	0.52	-0.4
2,477,547	+		GFF2455	0.52	+0.0
2,477,547	+		GFF2455	0.52	+0.2
2,477,547	+		GFF2455	0.52	+0.2
2,477,555	-		GFF2455	0.53	+0.9
2,477,555	-		GFF2455	0.53	+0.6
2,477,555	-		GFF2455	0.53	+0.0
2,477,555	-		GFF2455	0.53	-0.1
2,477,555	-		GFF2455	0.53	-0.1
2,477,555	-		GFF2455	0.53	+0.2
2,477,555	-		GFF2455	0.53	+0.8
2,477,565	+		GFF2455	0.54	+0.6
2,477,579	+		GFF2455	0.55	-1.0
2,477,584	+		GFF2455	0.55	-0.9
2,477,584	+		GFF2455	0.55	+0.7
2,477,584	+		GFF2455	0.55	+0.5
2,477,584	+		GFF2455	0.55	-0.3
2,477,589	+		GFF2455	0.56	+0.2
2,477,592	-		GFF2455	0.56	+0.9
2,477,602	-		GFF2455	0.57	+0.5
2,477,610	+		GFF2455	0.58	+0.4
2,477,621	+		GFF2455	0.59	+0.7
2,477,621	+		GFF2455	0.59	+0.4
2,477,629	-		GFF2455	0.60	-0.8
2,477,629	-		GFF2455	0.60	+0.8
2,477,640	+		GFF2455	0.61	+0.8
2,477,656	-		GFF2455	0.62	+0.2
2,477,660	+		GFF2455	0.62	+0.4
2,477,667	-		GFF2455	0.63	-0.7
2,477,702	+		GFF2455	0.66	-0.5
2,477,722	+		GFF2455	0.68	+1.2
2,477,743	+		GFF2455	0.70	+2.2
2,477,744	+		GFF2455	0.70	+0.2
2,477,751	-		GFF2455	0.71	+0.3
2,477,751	-		GFF2455	0.71	-1.2
2,477,757	-		GFF2455	0.71	+0.5
2,477,780	+		GFF2455	0.73	-2.1
2,477,782	+		GFF2455	0.73	-0.5
2,477,784	-		GFF2455	0.74	+1.2
2,477,790	+		GFF2455	0.74	+0.8
2,477,828	-		GFF2455	0.78	+0.5
2,477,828	-		GFF2455	0.78	+0.8
2,477,828	-		GFF2455	0.78	-2.0
2,477,837	-		GFF2455	0.78	+1.4
2,477,857	+		GFF2455	0.80	-1.7
2,477,869	-		GFF2455	0.81	-0.5
2,477,874	-		GFF2455	0.82	+0.8
2,477,897	+		GFF2455	0.84	+1.8
2,477,897	+		GFF2455	0.84	+1.1
2,477,907	+		GFF2455	0.85	-0.9
2,477,922	-		GFF2455	0.86	-0.3
2,477,944	-		GFF2455	0.88	-0.3
2,477,984	+				-0.1
2,477,996	+				+1.4
2,478,001	+				+1.1
2,478,006	+				+0.6
2,478,006	+				+0.4
2,478,006	+				+0.2
2,478,006	+				+0.9
2,478,006	+				+0.0
2,478,006	+				-1.0
2,478,006	+				-0.7
2,478,006	+				+0.8
2,478,006	+				+1.1
2,478,006	+				-0.2
2,478,006	+				-0.6
2,478,006	+				-0.2
2,478,006	+				+0.5
2,478,006	+				-0.7
2,478,006	+				+0.8
2,478,006	+				-0.4
2,478,006	+				+0.8
2,478,006	+				+0.6
2,478,006	+				+0.5
2,478,006	+				-0.1
2,478,006	+				+1.3
2,478,006	+				-0.1
2,478,006	+				+0.4
2,478,006	+				-0.8
2,478,006	+				-0.3
2,478,006	+				-0.7
2,478,006	+				+0.7
2,478,006	+				+1.2
2,478,006	+				-0.8
2,478,006	+				+1.2
2,478,006	+				-0.2
2,478,006	+				+1.1
2,478,006	+				-0.2
2,478,006	+				-0.5
2,478,006	+				+0.4
2,478,009	-				+1.9
2,478,009	-				-0.8
2,478,014	-				+0.2
2,478,014	-				+0.8
2,478,014	-				+0.4
2,478,014	-				+0.7
2,478,014	-				+0.0
2,478,014	-				-0.8
2,478,014	-				-1.1
2,478,014	-				+0.7
2,478,014	-				-0.3
2,478,014	-				-0.1
2,478,014	-				-0.3
2,478,014	-				+0.4
2,478,014	-				-0.3
2,478,014	-				+0.7
2,478,014	-				+0.7
2,478,014	-				+1.8
2,478,014	-				-0.3
2,478,014	-				+1.1
2,478,014	-				-0.1
2,478,014	-				-0.1
2,478,014	-				-2.3
2,478,014	-				+1.0
2,478,014	-				+0.5
2,478,014	-				+1.1
2,478,014	-				-0.3
2,478,014	-				+1.0
2,478,014	-				-0.3
2,478,014	-				+0.9
2,478,014	-				-0.8
2,478,016	-				+0.2
2,478,037	+				+0.2
2,478,047	+				+0.2
2,478,047	+				-0.2
2,478,051	+				+0.4
2,478,052	+				-0.1
2,478,055	-				+0.1
2,478,055	-				-0.9
2,478,057	+				-0.6
2,478,065	-				+0.9
2,478,065	-				-1.2
2,478,100	+				+1.0
2,478,100	+				+0.1
2,478,100	+				+0.9
2,478,108	-				+0.0
2,478,138	-		GFF2456	0.15	-0.6
2,478,141	-		GFF2456	0.16	+0.7
2,478,151	-		GFF2456	0.18	-0.2
2,478,157	+		GFF2456	0.20	+0.2
2,478,161	-		GFF2456	0.21	-0.2
2,478,169	+		GFF2456	0.22	+0.1
2,478,186	+		GFF2456	0.26	-0.6
2,478,191	+		GFF2456	0.28	+0.9
2,478,192	+		GFF2456	0.28	-2.5
2,478,239	+		GFF2456	0.39	-1.5
2,478,239	+		GFF2456	0.39	+0.3
2,478,240	-		GFF2456	0.39	-0.4
2,478,247	-		GFF2456	0.41	-0.3
2,478,247	-		GFF2456	0.41	+0.2
2,478,260	+		GFF2456	0.44	+0.3
2,478,265	+		GFF2456	0.45	-1.6
2,478,265	+		GFF2456	0.45	-2.2
2,478,270	+		GFF2456	0.46	-0.2
2,478,270	+		GFF2456	0.46	+1.1
2,478,270	+		GFF2456	0.46	+0.4
2,478,270	+		GFF2456	0.46	-1.3
2,478,270	+		GFF2456	0.46	-0.5
2,478,270	+		GFF2456	0.46	-0.9
2,478,270	+		GFF2456	0.46	-0.0
2,478,270	+		GFF2456	0.46	-0.1
2,478,270	+		GFF2456	0.46	-0.7
2,478,270	+		GFF2456	0.46	+0.1
2,478,270	+		GFF2456	0.46	-0.1
2,478,270	+		GFF2456	0.46	+0.3
2,478,270	+		GFF2456	0.46	+1.4
2,478,278	-		GFF2456	0.48	-0.1
2,478,278	-		GFF2456	0.48	-0.7
2,478,278	-		GFF2456	0.48	+0.4
2,478,278	-		GFF2456	0.48	-0.7
2,478,278	-		GFF2456	0.48	+0.3
2,478,278	-		GFF2456	0.48	-1.5
2,478,278	-		GFF2456	0.48	+0.1
2,478,278	-		GFF2456	0.48	+0.1
2,478,278	-		GFF2456	0.48	+0.3
2,478,278	-		GFF2456	0.48	+0.2
2,478,278	-		GFF2456	0.48	-1.1
2,478,278	-		GFF2456	0.48	+0.2
2,478,278	-		GFF2456	0.48	-1.5
2,478,278	-		GFF2456	0.48	-0.8
2,478,278	-		GFF2456	0.48	+0.1
2,478,278	-		GFF2456	0.48	+0.4
2,478,278	-		GFF2456	0.48	+0.2
2,478,278	-		GFF2456	0.48	-1.7
2,478,278	-		GFF2456	0.48	+0.1
2,478,278	-		GFF2456	0.48	+1.2
2,478,278	-		GFF2456	0.48	-0.6
2,478,278	-		GFF2456	0.48	+1.2
2,478,315	-		GFF2456	0.56	-0.2
2,478,317	+		GFF2456	0.57	-0.4
2,478,325	-		GFF2456	0.59	-0.0
2,478,325	-		GFF2456	0.59	+0.3
2,478,359	+		GFF2456	0.66	-1.5
2,478,384	+		GFF2456	0.72	+0.1
2,478,384	+		GFF2456	0.72	+0.2
2,478,384	-		GFF2456	0.72	+1.2
2,478,392	-		GFF2456	0.74	-1.1
2,478,392	-		GFF2456	0.74	-0.6
2,478,392	-		GFF2456	0.74	+0.7
2,478,392	-		GFF2456	0.74	+0.1
2,478,397	-		GFF2456	0.75	+0.5
2,478,418	+		GFF2456	0.80	-1.0
2,478,418	+		GFF2456	0.80	+0.0
2,478,418	+		GFF2456	0.80	-0.2
2,478,418	+		GFF2456	0.80	+0.8
2,478,423	+		GFF2456	0.81	+0.6
2,478,426	-		GFF2456	0.82	-0.5
2,478,426	-		GFF2456	0.82	-0.3
2,478,437	+		GFF2456	0.84	-1.3
2,478,460	+				-0.4
2,478,465	+				-1.0
2,478,468	-				-0.8
2,478,473	-				-0.6
2,478,502	+				+0.8
2,478,507	+				-1.2
2,478,511	+				+0.3
2,478,511	+				+1.1
2,478,511	+				+1.1
2,478,511	+				+0.7
2,478,511	+				-0.4
2,478,511	+				+0.9
2,478,511	+				-0.0
2,478,511	+				+0.1
2,478,511	+				-0.1
2,478,511	+				+0.2
2,478,511	+				-1.5
2,478,511	+				-1.6
2,478,511	+				+0.4
2,478,511	+				+0.5
2,478,511	+				+1.3
2,478,519	-				-2.0
2,478,519	-				-1.2
2,478,519	-				+0.4
2,478,519	-				+0.0
2,478,519	-				-0.6
2,478,519	-				+0.9
2,478,519	-				+0.1
2,478,519	-				-1.4
2,478,519	-				+0.3
2,478,519	-				+0.2
2,478,519	-				-0.2
2,478,521	+				-0.6
2,478,521	+				+0.7
2,478,526	+				-1.2
2,478,526	+				-0.8
2,478,529	-				-0.3
2,478,529	-				-0.4
2,478,529	-				-1.0
2,478,533	+				+0.8
2,478,534	-				-1.2
2,478,534	-				-1.6
2,478,539	+				-1.7
2,478,540	+				+1.2
2,478,546	+				+0.6
2,478,546	+				-0.2
2,478,578	+				-1.6
2,478,612	+				-0.9
2,478,613	-				+0.2
2,478,614	+				+0.4
2,478,614	+				+0.9
2,478,614	+				-1.0
2,478,614	+				-0.4
2,478,614	+				+0.6
2,478,614	+				-0.6
2,478,622	-				-0.1
2,478,622	-				+0.7
2,478,622	-				-1.1
2,478,628	-				-1.3
2,478,660	-		GFF2457	0.13	-1.3
2,478,667	+		GFF2457	0.14	-0.6
2,478,670	+		GFF2457	0.14	-0.6
2,478,675	-		GFF2457	0.14	-0.0
2,478,680	+		GFF2457	0.15	+1.3
2,478,688	-		GFF2457	0.16	+1.0
2,478,688	-		GFF2457	0.16	-0.0
2,478,689	-		GFF2457	0.16	+0.3
2,478,705	-		GFF2457	0.17	+0.1
2,478,715	+		GFF2457	0.18	+0.8
2,478,717	-		GFF2457	0.18	-0.1
2,478,724	+		GFF2457	0.19	-0.4
2,478,736	+		GFF2457	0.20	-2.8
2,478,736	+		GFF2457	0.20	-0.1
2,478,736	+		GFF2457	0.20	-0.2
2,478,742	-		GFF2457	0.21	+0.2
2,478,742	-		GFF2457	0.21	-0.6
2,478,744	-		GFF2457	0.21	-0.8
2,478,765	+		GFF2457	0.23	+1.1
2,478,765	+		GFF2457	0.23	-3.2
2,478,765	+		GFF2457	0.23	-0.2
2,478,765	+		GFF2457	0.23	+0.7
2,478,773	-		GFF2457	0.24	+0.1
2,478,775	-		GFF2457	0.24	+0.4
2,478,787	+		GFF2457	0.25	+1.2
2,478,812	-		GFF2457	0.28	-0.0
2,478,813	+		GFF2457	0.28	-1.2
2,478,842	+		GFF2457	0.31	-0.0
2,478,856	+		GFF2457	0.32	-0.0
2,478,880	+		GFF2457	0.34	-1.6
2,478,882	-		GFF2457	0.35	+0.1
2,478,888	-		GFF2457	0.35	-2.8
2,478,888	-		GFF2457	0.35	-1.2
2,478,893	-		GFF2457	0.36	-1.6
2,478,893	-		GFF2457	0.36	-0.5
2,478,893	-		GFF2457	0.36	+0.4
2,478,893	-		GFF2457	0.36	+0.7
2,478,906	-		GFF2457	0.37	-0.5
2,478,919	+		GFF2457	0.38	+0.9
2,478,927	-		GFF2457	0.39	-0.6
2,478,927	-		GFF2457	0.39	+1.2
2,478,927	-		GFF2457	0.39	-0.0
2,478,930	+		GFF2457	0.39	-0.2
2,478,936	+		GFF2457	0.40	-0.1
2,478,936	+		GFF2457	0.40	-0.1
2,478,936	+		GFF2457	0.40	-1.3
2,478,941	+		GFF2457	0.40	-1.2
2,478,944	-		GFF2457	0.41	+1.7
2,478,944	-		GFF2457	0.41	-0.5
2,478,946	+		GFF2457	0.41	-0.6
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