Strain Fitness in Sphingobium sp. HT1-2 around GFF2392

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,412,580	-		GFF2391	0.20	+0.2
2,412,594	+		GFF2391	0.21	-1.2
2,412,611	+		GFF2391	0.23	-1.4
2,412,619	-		GFF2391	0.24	+0.2
2,412,621	-		GFF2391	0.24	+0.1
2,412,623	+		GFF2391	0.24	-2.1
2,412,623	+		GFF2391	0.24	-1.0
2,412,623	+		GFF2391	0.24	-0.5
2,412,631	-		GFF2391	0.25	-0.2
2,412,631	-		GFF2391	0.25	+0.4
2,412,638	+		GFF2391	0.25	+0.6
2,412,638	+		GFF2391	0.25	+0.7
2,412,638	+		GFF2391	0.25	-0.6
2,412,646	-		GFF2391	0.26	-0.8
2,412,646	-		GFF2391	0.26	-0.5
2,412,646	-		GFF2391	0.26	-0.7
2,412,646	-		GFF2391	0.26	-0.4
2,412,651	-		GFF2391	0.26	-0.5
2,412,693	+		GFF2391	0.30	-1.4
2,412,701	-		GFF2391	0.31	+0.4
2,412,703	+		GFF2391	0.31	-0.4
2,412,703	+		GFF2391	0.31	-0.2
2,412,703	+		GFF2391	0.31	-0.2
2,412,703	+		GFF2391	0.31	+1.1
2,412,703	+		GFF2391	0.31	-1.4
2,412,709	-		GFF2391	0.31	-0.1
2,412,711	-		GFF2391	0.32	-0.8
2,412,711	-		GFF2391	0.32	+0.3
2,412,716	-		GFF2391	0.32	+0.8
2,412,716	-		GFF2391	0.32	+1.3
2,412,724	+		GFF2391	0.33	-0.5
2,412,724	+		GFF2391	0.33	-0.6
2,412,724	+		GFF2391	0.33	+1.2
2,412,732	-		GFF2391	0.33	-1.1
2,412,751	+		GFF2391	0.35	-0.5
2,412,780	-		GFF2391	0.38	+1.1
2,412,795	-		GFF2391	0.39	-0.3
2,412,800	-		GFF2391	0.39	-1.4
2,412,855	+		GFF2391	0.44	+1.0
2,412,873	-		GFF2391	0.46	+0.9
2,412,889	-		GFF2391	0.47	+0.9
2,412,954	+		GFF2391	0.53	-0.2
2,412,954	+		GFF2391	0.53	+0.0
2,412,954	+		GFF2391	0.53	+0.0
2,413,038	+		GFF2391	0.60	-1.5
2,413,041	-		GFF2391	0.60	+1.6
2,413,052	+		GFF2391	0.61	+0.1
2,413,064	+		GFF2391	0.62	+0.2
2,413,064	+		GFF2391	0.62	-0.6
2,413,072	-		GFF2391	0.63	+1.0
2,413,072	-		GFF2391	0.63	-0.4
2,413,072	-		GFF2391	0.63	+1.2
2,413,094	-		GFF2391	0.65	-1.0
2,413,103	+		GFF2391	0.66	-0.4
2,413,104	+		GFF2391	0.66	-0.6
2,413,113	+		GFF2391	0.67	+0.7
2,413,113	+		GFF2391	0.67	-1.4
2,413,121	-		GFF2391	0.67	-0.1
2,413,168	-		GFF2391	0.71	-0.2
2,413,192	+		GFF2391	0.74	+0.3
2,413,197	+		GFF2391	0.74	-1.9
2,413,200	-		GFF2391	0.74	-1.6
2,413,200	-		GFF2391	0.74	-0.9
2,413,202	+		GFF2391	0.74	-2.6
2,413,203	+		GFF2391	0.75	-1.7
2,413,205	-		GFF2391	0.75	+0.7
2,413,217	-		GFF2391	0.76	+0.5
2,413,228	+		GFF2391	0.77	-0.3
2,413,236	+		GFF2391	0.77	+0.0
2,413,241	-		GFF2391	0.78	+0.4
2,413,259	+		GFF2391	0.79	+0.2
2,413,259	+		GFF2391	0.79	+0.8
2,413,259	+		GFF2391	0.79	+0.4
2,413,264	+		GFF2391	0.80	-0.9
2,413,264	+		GFF2391	0.80	-0.7
2,413,267	-		GFF2391	0.80	-0.3
2,413,281	+		GFF2391	0.81	+1.4
2,413,281	+		GFF2391	0.81	-1.1
2,413,282	-		GFF2391	0.81	-0.3
2,413,286	+		GFF2391	0.82	+0.8
2,413,286	+		GFF2391	0.82	-0.2
2,413,289	-		GFF2391	0.82	-0.6
2,413,289	-		GFF2391	0.82	+0.6
2,413,289	-		GFF2391	0.82	-2.3
2,413,291	+		GFF2391	0.82	+1.2
2,413,291	+		GFF2391	0.82	+0.3
2,413,291	+		GFF2391	0.82	-0.4
2,413,291	+		GFF2391	0.82	-0.3
2,413,294	-		GFF2391	0.82	-0.7
2,413,296	+		GFF2391	0.83	+1.0
2,413,297	+		GFF2391	0.83	+1.0
2,413,299	-		GFF2391	0.83	-0.5
2,413,299	-		GFF2391	0.83	+0.0
2,413,299	-		GFF2391	0.83	-1.7
2,413,299	-		GFF2391	0.83	-0.6
2,413,299	-		GFF2391	0.83	-2.2
2,413,299	-		GFF2391	0.83	-0.6
2,413,304	-		GFF2391	0.83	+0.6
2,413,304	-		GFF2391	0.83	+0.7
2,413,305	-		GFF2391	0.83	-0.8
2,413,318	+		GFF2391	0.85	-0.5
2,413,325	-		GFF2391	0.85	-0.9
2,413,331	-		GFF2391	0.86	-0.3
2,413,351	+		GFF2391	0.87	+0.7
2,413,376	+		GFF2391	0.90	-0.4
2,413,381	+				-1.2
2,413,384	-				-1.6
2,413,384	-				+0.2
2,413,384	-				+1.1
2,413,450	+				-1.8
2,413,450	+				+0.3
2,413,458	-				+1.1
2,413,458	-				-1.2
2,413,500	-				+0.7
2,413,503	+				-0.8
2,413,503	+				-0.6
2,413,503	+				-1.1
2,413,503	+				-0.4
2,413,511	-				+0.1
2,413,511	-				-0.6
2,413,516	+				+0.7
2,413,516	+				-2.5
2,413,516	+				+0.4
2,413,516	+				+1.3
2,413,516	+				-0.5
2,413,516	+				-0.0
2,413,516	+				-0.8
2,413,516	+				-1.8
2,413,516	+				-2.3
2,413,516	-				-1.5
2,413,523	+				+0.2
2,413,524	-				+0.1
2,413,524	-				-0.1
2,413,524	-				+0.2
2,413,524	-				+0.3
2,413,524	-				-0.1
2,413,524	-				-0.4
2,413,524	-				-0.6
2,413,524	-				+0.8
2,413,524	-				+0.6
2,413,524	-				-0.4
2,413,524	-				+0.6
2,413,524	-				-0.9
2,413,563	+				+0.4
2,413,568	-				-0.6
2,413,590	-				+1.1
2,413,595	+				-0.8
2,413,595	+				+0.9
2,413,613	-				-0.2
2,413,617	+				-0.1
2,413,627	+				-0.1
2,413,627	+				+1.2
2,413,635	-				-0.4
2,413,662	+				-2.5
2,413,667	+				-0.2
2,413,705	+		GFF2392	0.14	-0.9
2,413,743	+		GFF2392	0.19	+0.3
2,413,743	+		GFF2392	0.19	-0.2
2,413,745	+		GFF2392	0.19	+1.5
2,413,751	-		GFF2392	0.20	-1.2
2,413,756	-		GFF2392	0.20	+0.6
2,413,756	-		GFF2392	0.20	+0.5
2,413,772	-		GFF2392	0.22	+0.7
2,413,803	+		GFF2392	0.26	+1.0
2,413,803	+		GFF2392	0.26	+0.2
2,413,803	+		GFF2392	0.26	-0.5
2,413,803	+		GFF2392	0.26	-0.2
2,413,817	+		GFF2392	0.27	+0.6
2,413,853	+		GFF2392	0.31	+0.9
2,413,863	-		GFF2392	0.32	+0.4
2,413,865	+		GFF2392	0.33	-1.0
2,413,873	-		GFF2392	0.34	+0.8
2,413,904	+		GFF2392	0.37	+0.5
2,413,908	+		GFF2392	0.38	-0.4
2,413,919	+		GFF2392	0.39	-0.8
2,413,922	-		GFF2392	0.39	-1.5
2,413,925	+		GFF2392	0.40	-0.4
2,413,978	+		GFF2392	0.46	-1.1
2,413,993	+		GFF2392	0.47	+0.7
2,414,001	-		GFF2392	0.48	-0.4
2,414,003	+		GFF2392	0.48	+0.2
2,414,003	+		GFF2392	0.48	+0.2
2,414,003	+		GFF2392	0.48	+0.6
2,414,003	+		GFF2392	0.48	+0.5
2,414,003	+		GFF2392	0.48	-1.2
2,414,006	-		GFF2392	0.49	-0.6
2,414,010	+		GFF2392	0.49	+1.7
2,414,011	-		GFF2392	0.49	+0.1
2,414,011	-		GFF2392	0.49	+0.0
2,414,011	-		GFF2392	0.49	-0.0
2,414,011	-		GFF2392	0.49	-0.9
2,414,011	-		GFF2392	0.49	-1.0
2,414,022	-		GFF2392	0.51	-0.4
2,414,035	+		GFF2392	0.52	-0.4
2,414,035	+		GFF2392	0.52	+0.1
2,414,035	+		GFF2392	0.52	-0.2
2,414,043	-		GFF2392	0.53	-1.8
2,414,045	+		GFF2392	0.53	-0.5
2,414,050	+		GFF2392	0.54	-0.1
2,414,050	+		GFF2392	0.54	-1.0
2,414,050	+		GFF2392	0.54	-0.3
2,414,050	+		GFF2392	0.54	+0.2
2,414,050	+		GFF2392	0.54	-0.1
2,414,050	+		GFF2392	0.54	-0.7
2,414,050	+		GFF2392	0.54	-0.2
2,414,050	+		GFF2392	0.54	-0.5
2,414,050	+		GFF2392	0.54	+0.9
2,414,050	+		GFF2392	0.54	-1.2
2,414,050	+		GFF2392	0.54	-0.9
2,414,050	+		GFF2392	0.54	+0.4
2,414,058	-		GFF2392	0.55	+0.4
2,414,058	-		GFF2392	0.55	-1.6
2,414,058	-		GFF2392	0.55	-1.5
2,414,058	-		GFF2392	0.55	-1.4
2,414,058	-		GFF2392	0.55	-0.0
2,414,058	-		GFF2392	0.55	+0.3
2,414,058	-		GFF2392	0.55	+0.3
2,414,058	-		GFF2392	0.55	+0.2
2,414,058	-		GFF2392	0.55	-0.0
2,414,058	-		GFF2392	0.55	-1.3
2,414,058	-		GFF2392	0.55	-2.0
2,414,060	+		GFF2392	0.55	-0.2
2,414,063	-		GFF2392	0.55	+0.9
2,414,063	-		GFF2392	0.55	+0.6
2,414,067	+		GFF2392	0.56	+0.3
2,414,067	+		GFF2392	0.56	-1.6
2,414,067	+		GFF2392	0.56	+1.9
2,414,067	+		GFF2392	0.56	-0.4
2,414,067	+		GFF2392	0.56	+0.1
2,414,067	+		GFF2392	0.56	+0.9
2,414,068	-		GFF2392	0.56	+0.2
2,414,068	-		GFF2392	0.56	-0.1
2,414,068	-		GFF2392	0.56	-2.4
2,414,072	+		GFF2392	0.56	-0.6
2,414,072	+		GFF2392	0.56	-0.1
2,414,072	+		GFF2392	0.56	-2.4
2,414,073	+		GFF2392	0.56	-0.5
2,414,073	+		GFF2392	0.56	+0.6
2,414,073	+		GFF2392	0.56	+0.2
2,414,073	+		GFF2392	0.56	-0.3
2,414,073	+		GFF2392	0.56	-0.2
2,414,073	+		GFF2392	0.56	+0.0
2,414,073	+		GFF2392	0.56	-0.7
2,414,075	-		GFF2392	0.57	-0.6
2,414,075	-		GFF2392	0.57	-0.4
2,414,080	-		GFF2392	0.57	-0.4
2,414,080	-		GFF2392	0.57	-0.4
2,414,080	-		GFF2392	0.57	-0.6
2,414,081	-		GFF2392	0.57	+0.3
2,414,081	-		GFF2392	0.57	+0.2
2,414,081	-		GFF2392	0.57	-0.5
2,414,081	-		GFF2392	0.57	-1.5
2,414,081	-		GFF2392	0.57	-0.7
2,414,081	-		GFF2392	0.57	+1.3
2,414,083	+		GFF2392	0.58	-0.4
2,414,103	-		GFF2392	0.60	-0.5
2,414,106	+		GFF2392	0.60	-1.2
2,414,110	+		GFF2392	0.61	+1.1
2,414,145	+		GFF2392	0.65	-1.2
2,414,260	-		GFF2392	0.78	-0.2
2,414,274	+		GFF2392	0.79	-1.0
2,414,286	-		GFF2392	0.81	-0.6
2,414,299	+		GFF2392	0.82	+0.9
2,414,307	-		GFF2392	0.83	-0.3
2,414,330	+		GFF2392	0.86	-0.7
2,414,348	-		GFF2392	0.88	-2.3
2,414,348	-		GFF2392	0.88	+0.6
2,414,361	-		GFF2392	0.89	-0.4
2,414,368	+				-1.2
2,414,368	+				-1.4
2,414,376	-				-0.4
2,414,376	-				+0.6
2,414,385	+				-0.1
2,414,385	+				-3.0
2,414,385	+				-0.9
2,414,385	+				-0.4
2,414,385	+				-0.4
2,414,385	+				-1.3
2,414,393	-				-0.3
2,414,393	-				-0.4
2,414,393	-				+0.1
2,414,393	-				-0.4
2,414,395	+				-0.2
2,414,408	-				+0.6
2,414,411	-				-0.0
2,414,422	-				-0.6
2,414,432	-				-0.5
2,414,435	+				+1.3
2,414,446	+				+0.4
2,414,446	+				-0.4
2,414,460	-				-0.3
2,414,461	+				-0.1
2,414,462	+				-0.1
2,414,479	-				+0.6
2,414,484	+				+0.3
2,414,516	+				-0.5
2,414,524	-				-2.7
2,414,546	-		GFF2393	0.11	-0.3
2,414,583	-		GFF2393	0.16	-1.5
2,414,600	-		GFF2393	0.18	+0.3
2,414,602	-		GFF2393	0.18	-1.5
2,414,616	+		GFF2393	0.20	-0.2
2,414,634	+		GFF2393	0.22	+0.7
2,414,635	+		GFF2393	0.22	+1.4
2,414,643	-		GFF2393	0.23	-0.7
2,414,646	+		GFF2393	0.23	+0.1
2,414,681	-		GFF2393	0.27	+1.2
2,414,685	+		GFF2393	0.28	+0.1
2,414,689	-		GFF2393	0.28	+0.9
2,414,690	+		GFF2393	0.28	+0.6
2,414,690	+		GFF2393	0.28	+0.2
2,414,690	+		GFF2393	0.28	-0.3
2,414,692	+		GFF2393	0.29	-1.1
2,414,693	-		GFF2393	0.29	-0.2
2,414,693	-		GFF2393	0.29	+0.8
2,414,705	-		GFF2393	0.30	-0.5
2,414,733	-		GFF2393	0.34	+0.7
2,414,734	-		GFF2393	0.34	+0.4
2,414,744	+		GFF2393	0.35	+0.3
2,414,766	-		GFF2393	0.37	-0.6
2,414,766	-		GFF2393	0.37	+0.2
2,414,766	-		GFF2393	0.37	+0.7
2,414,766	-		GFF2393	0.37	+1.3
2,414,772	-		GFF2393	0.38	+0.1
2,414,783	+		GFF2393	0.39	-2.0
2,414,783	+		GFF2393	0.39	+0.8
2,414,791	-		GFF2393	0.40	-0.9
2,414,798	-		GFF2393	0.41	-1.9
2,414,803	-		GFF2393	0.42	+0.2
2,414,840	+		GFF2393	0.46	-1.5
2,414,914	+		GFF2393	0.55	-0.9
2,414,914	+		GFF2393	0.55	+0.8
2,414,975	+		GFF2393	0.62	+0.3
2,414,981	+		GFF2393	0.63	-0.9
2,414,985	+		GFF2393	0.63	-0.7
2,414,993	-		GFF2393	0.64	-3.1
2,415,008	-		GFF2393	0.66	+0.2
2,415,012	-		GFF2393	0.67	-0.5
2,415,016	+		GFF2393	0.67	+1.5
2,415,016	+		GFF2393	0.67	-0.4
2,415,016	+		GFF2393	0.67	+1.2
2,415,028	+		GFF2393	0.68	-0.4
2,415,034	+		GFF2393	0.69	+0.6
2,415,058	-		GFF2393	0.72	-0.4
2,415,072	+		GFF2393	0.74	-1.9
2,415,072	+		GFF2393	0.74	-0.1
2,415,079	+		GFF2393	0.74	-0.8
2,415,079	+		GFF2393	0.74	-0.2
2,415,079	+		GFF2393	0.74	+0.0
2,415,080	-		GFF2393	0.75	+0.3
2,415,087	-		GFF2393	0.75	-0.5
2,415,094	-		GFF2393	0.76	-0.9
2,415,096	+		GFF2393	0.76	-0.6
2,415,159	+		GFF2393	0.84	-0.0
2,415,195	+		GFF2393	0.88	-0.2
2,415,195	+		GFF2393	0.88	-2.4
2,415,195	+		GFF2393	0.88	-0.9
2,415,198	-		GFF2393	0.89	+0.1
2,415,203	-		GFF2393	0.89	-1.0
2,415,203	-		GFF2393	0.89	-0.2
2,415,203	-		GFF2393	0.89	-1.4
2,415,203	-		GFF2393	0.89	+0.8
2,415,203	-		GFF2393	0.89	+1.1
2,415,203	-		GFF2393	0.89	-1.2
2,415,297	-				-1.9
2,415,297	-				+1.1
2,415,302	+				-1.8
2,415,311	+				-0.4
2,415,311	+				+0.3
2,415,311	+				-1.4
2,415,323	-				+0.3
2,415,333	-				-0.2
2,415,346	+				+1.6
2,415,369	+				+0.1
2,415,376	+				-1.3
2,415,376	+				+0.3
2,415,377	+				-2.4
2,415,378	-				-0.0
2,415,378	-				+1.2
2,415,378	-				+0.0
2,415,384	-		GFF2394	0.11	-0.1
2,415,391	-		GFF2394	0.17	-1.8
2,415,391	-		GFF2394	0.17	-1.6
2,415,391	-		GFF2394	0.17	-0.8
2,415,391	-		GFF2394	0.17	-1.0
2,415,426	-		GFF2394	0.47	+0.3
2,415,431	-		GFF2394	0.52	-0.1
2,415,450	-		GFF2394	0.68	-1.5