Strain Fitness in Sphingobium sp. HT1-2 around GFF2218

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,234,249	-		GFF2217	0.77	+0.8
2,234,249	-		GFF2217	0.77	-0.8
2,234,249	-		GFF2217	0.77	+0.7
2,234,249	-		GFF2217	0.77	-2.0
2,234,249	-		GFF2217	0.77	-3.0
2,234,249	-		GFF2217	0.77	-0.0
2,234,249	-		GFF2217	0.77	-0.1
2,234,249	-		GFF2217	0.77	+0.8
2,234,249	-		GFF2217	0.77	-0.2
2,234,249	-		GFF2217	0.77	+0.2
2,234,249	-		GFF2217	0.77	+0.6
2,234,249	-		GFF2217	0.77	-1.3
2,234,249	-		GFF2217	0.77	-0.2
2,234,249	-		GFF2217	0.77	+0.6
2,234,249	-		GFF2217	0.77	+0.1
2,234,251	+		GFF2217	0.77	+0.6
2,234,254	-		GFF2217	0.77	-0.3
2,234,259	-		GFF2217	0.77	-0.0
2,234,264	-		GFF2217	0.77	-0.1
2,234,276	-		GFF2217	0.78	+1.1
2,234,288	+		GFF2217	0.78	-0.4
2,234,296	-		GFF2217	0.78	-1.4
2,234,306	-		GFF2217	0.78	+0.4
2,234,309	-		GFF2217	0.79	-1.2
2,234,309	-		GFF2217	0.79	-1.3
2,234,309	-		GFF2217	0.79	-0.8
2,234,337	+		GFF2217	0.79	+0.6
2,234,337	+		GFF2217	0.79	-2.5
2,234,337	+		GFF2217	0.79	-1.7
2,234,337	+		GFF2217	0.79	-0.0
2,234,337	+		GFF2217	0.79	+0.4
2,234,342	+		GFF2217	0.80	+0.5
2,234,345	-		GFF2217	0.80	-0.2
2,234,345	-		GFF2217	0.80	-0.6
2,234,347	+		GFF2217	0.80	-1.4
2,234,347	+		GFF2217	0.80	+2.2
2,234,347	+		GFF2217	0.80	-0.5
2,234,355	-		GFF2217	0.80	+0.9
2,234,356	-		GFF2217	0.80	+1.1
2,234,370	-		GFF2217	0.80	+0.1
2,234,372	+		GFF2217	0.80	+0.0
2,234,372	+		GFF2217	0.80	-0.4
2,234,380	-		GFF2217	0.81	-1.5
2,234,380	-		GFF2217	0.81	+0.3
2,234,426	+		GFF2217	0.82	+0.2
2,234,426	+		GFF2217	0.82	+1.4
2,234,426	+		GFF2217	0.82	-0.3
2,234,426	+		GFF2217	0.82	+0.1
2,234,426	+		GFF2217	0.82	-1.5
2,234,427	+		GFF2217	0.82	-2.0
2,234,429	-		GFF2217	0.82	-0.1
2,234,434	-		GFF2217	0.82	-0.2
2,234,434	-		GFF2217	0.82	-1.0
2,234,434	-		GFF2217	0.82	-1.2
2,234,434	-		GFF2217	0.82	+0.2
2,234,434	-		GFF2217	0.82	-0.4
2,234,458	+		GFF2217	0.83	-1.2
2,234,483	+		GFF2217	0.84	+0.4
2,234,503	+		GFF2217	0.84	-1.8
2,234,527	-		GFF2217	0.85	+0.1
2,234,541	+		GFF2217	0.85	-0.0
2,234,541	+		GFF2217	0.85	-0.0
2,234,541	+		GFF2217	0.85	-0.6
2,234,549	-		GFF2217	0.86	-0.4
2,234,552	+		GFF2217	0.86	+0.4
2,234,560	-		GFF2217	0.86	+0.1
2,234,597	+		GFF2217	0.87	+0.1
2,234,613	-		GFF2217	0.87	+0.0
2,234,643	-		GFF2217	0.88	-0.1
2,234,643	-		GFF2217	0.88	-0.9
2,234,643	-		GFF2217	0.88	-2.1
2,234,671	+		GFF2217	0.89	+0.4
2,234,694	+		GFF2217	0.90	+0.1
2,234,715	-				-0.6
2,234,727	+				-0.9
2,234,727	+				-1.5
2,234,731	-				-0.7
2,234,735	-				-1.7
2,234,735	-				-2.1
2,234,735	-				+0.2
2,234,735	-				+0.3
2,234,735	-				+0.2
2,234,735	-				-0.2
2,234,740	-				+0.7
2,234,760	+				+0.3
2,234,782	+				-1.3
2,234,782	+				-2.2
2,234,782	+				+0.0
2,234,787	+				-0.3
2,234,790	-				+0.1
2,234,790	-				-0.4
2,234,809	+				-0.4
2,234,810	-				-0.3
2,234,812	-				-0.8
2,234,817	-				-0.2
2,234,819	+				-1.0
2,234,819	+				-0.6
2,234,824	+				-1.5
2,234,824	+				+0.2
2,234,827	-				+1.1
2,234,827	-				-1.5
2,234,832	-				+0.3
2,234,837	+				-1.6
2,234,847	+				-0.3
2,234,847	+				+0.2
2,234,847	+				-1.6
2,234,847	+				+0.3
2,234,847	+				-0.5
2,234,847	+				+0.9
2,234,847	+				+0.5
2,234,855	-				-0.3
2,234,886	-				+0.3
2,234,887	-				-0.1
2,234,892	-				+0.8
2,234,915	-				+1.0
2,234,918	+				+0.5
2,234,936	+				+0.1
2,234,936	+				-0.8
2,234,957	+				-1.5
2,234,962	+				-0.1
2,234,970	-				-1.2
2,234,981	+				-0.6
2,234,981	+				-0.7
2,234,981	+				-0.3
2,234,983	-				+1.7
2,234,994	-				-0.9
2,234,999	-				-0.3
2,235,040	+				-0.2
2,235,043	-				-0.7
2,235,071	+				+0.3
2,235,078	+				-1.4
2,235,124	+				-2.0
2,235,132	-				-1.3
2,235,132	-				+0.1
2,235,132	-				+0.5
2,235,132	-				-1.1
2,235,134	+				-0.1
2,235,134	+				-1.6
2,235,139	+				-0.4
2,235,139	+				-0.3
2,235,177	+				+0.2
2,235,185	-				-1.1
2,235,185	-				+0.6
2,235,196	+				-0.1
2,235,204	-				-1.5
2,235,204	-				+0.3
2,235,204	-				-0.0
2,235,204	-				+0.3
2,235,227	+				+0.4
2,235,235	-				+0.6
2,235,237	+				-1.0
2,235,239	-				-1.1
2,235,246	-				-0.3
2,235,273	-				-1.1
2,235,290	+				+0.5
2,235,295	+				+0.1
2,235,297	+				+0.3
2,235,303	-				+0.1
2,235,335	+				-2.4
2,235,338	+				-0.5
2,235,355	+				+0.2
2,235,361	-				+1.3
2,235,363	+				-0.6
2,235,363	-				-1.7
2,235,397	+				+0.9
2,235,397	+				-1.3
2,235,400	-				-0.1
2,235,422	+		GFF2218	0.11	-1.1
2,235,450	+		GFF2218	0.12	+0.8
2,235,454	-		GFF2218	0.12	+0.9
2,235,466	+		GFF2218	0.13	-2.3
2,235,466	+		GFF2218	0.13	-0.5
2,235,468	-		GFF2218	0.13	+0.3
2,235,471	+		GFF2218	0.13	-0.7
2,235,519	+		GFF2218	0.16	-0.9
2,235,519	+		GFF2218	0.16	+0.9
2,235,527	-		GFF2218	0.17	-0.9
2,235,527	-		GFF2218	0.17	-1.1
2,235,614	+		GFF2218	0.22	-1.0
2,235,648	-		GFF2218	0.24	-1.3
2,235,660	+		GFF2218	0.25	-0.6
2,235,660	+		GFF2218	0.25	+0.2
2,235,668	-		GFF2218	0.25	-1.4
2,235,670	+		GFF2218	0.25	+0.2
2,235,670	+		GFF2218	0.25	+0.3
2,235,673	-		GFF2218	0.26	+0.9
2,235,678	-		GFF2218	0.26	-0.3
2,235,678	-		GFF2218	0.26	-1.5
2,235,678	-		GFF2218	0.26	-1.3
2,235,678	-		GFF2218	0.26	-0.7
2,235,678	-		GFF2218	0.26	+0.8
2,235,678	-		GFF2218	0.26	+0.1
2,235,690	+		GFF2218	0.27	+0.6
2,235,690	+		GFF2218	0.27	-0.1
2,235,690	+		GFF2218	0.27	+0.3
2,235,690	+		GFF2218	0.27	-0.5
2,235,703	-		GFF2218	0.27	-0.2
2,235,703	-		GFF2218	0.27	+0.2
2,235,712	+		GFF2218	0.28	-1.5
2,235,715	+		GFF2218	0.28	-1.2
2,235,743	+		GFF2218	0.30	+0.4
2,235,743	+		GFF2218	0.30	-1.4
2,235,743	+		GFF2218	0.30	-0.6
2,235,743	+		GFF2218	0.30	-0.4
2,235,743	+		GFF2218	0.30	-2.3
2,235,743	+		GFF2218	0.30	-1.1
2,235,743	+		GFF2218	0.30	+0.3
2,235,743	+		GFF2218	0.30	-0.2
2,235,743	+		GFF2218	0.30	-2.0
2,235,743	+		GFF2218	0.30	-0.7
2,235,743	+		GFF2218	0.30	-0.1
2,235,743	+		GFF2218	0.30	-1.6
2,235,746	-		GFF2218	0.30	-0.4
2,235,748	+		GFF2218	0.30	-0.6
2,235,751	-		GFF2218	0.30	-0.6
2,235,751	-		GFF2218	0.30	-0.4
2,235,751	-		GFF2218	0.30	-0.8
2,235,751	-		GFF2218	0.30	+1.1
2,235,751	-		GFF2218	0.30	-0.2
2,235,751	-		GFF2218	0.30	-0.2
2,235,751	-		GFF2218	0.30	-1.8
2,235,751	-		GFF2218	0.30	+0.9
2,235,754	+		GFF2218	0.30	-0.1
2,235,754	+		GFF2218	0.30	-0.7
2,235,754	+		GFF2218	0.30	-0.4
2,235,754	+		GFF2218	0.30	+0.9
2,235,754	+		GFF2218	0.30	+0.6
2,235,754	+		GFF2218	0.30	-0.3
2,235,754	+		GFF2218	0.30	+1.1
2,235,754	+		GFF2218	0.30	+0.1
2,235,754	+		GFF2218	0.30	+0.8
2,235,754	+		GFF2218	0.30	+0.2
2,235,754	+		GFF2218	0.30	-0.0
2,235,754	+		GFF2218	0.30	-0.6
2,235,756	-		GFF2218	0.31	+0.6
2,235,759	+		GFF2218	0.31	-0.5
2,235,759	+		GFF2218	0.31	+0.1
2,235,759	+		GFF2218	0.31	+0.2
2,235,759	+		GFF2218	0.31	+0.1
2,235,759	+		GFF2218	0.31	+0.1
2,235,759	+		GFF2218	0.31	+0.9
2,235,759	+		GFF2218	0.31	-1.3
2,235,762	-		GFF2218	0.31	+0.3
2,235,762	-		GFF2218	0.31	+1.2
2,235,772	-		GFF2218	0.32	-0.9
2,235,772	-		GFF2218	0.32	+0.2
2,235,802	-		GFF2218	0.33	-0.3
2,235,849	-		GFF2218	0.36	-0.5
2,235,864	+		GFF2218	0.37	+0.5
2,235,870	-		GFF2218	0.37	-0.7
2,235,874	-		GFF2218	0.38	-1.6
2,235,892	-		GFF2218	0.39	+0.3
2,235,892	-		GFF2218	0.39	-0.9
2,235,901	+		GFF2218	0.39	-2.0
2,235,901	+		GFF2218	0.39	-1.3
2,235,909	-		GFF2218	0.40	-0.1
2,235,909	-		GFF2218	0.40	+0.2
2,235,919	+		GFF2218	0.40	-2.2
2,235,919	-		GFF2218	0.40	+0.1
2,235,934	-		GFF2218	0.41	+1.3
2,235,959	+		GFF2218	0.43	+0.1
2,235,963	-		GFF2218	0.43	-1.1
2,235,963	-		GFF2218	0.43	+1.0
2,235,969	+		GFF2218	0.43	-0.7
2,235,995	-		GFF2218	0.45	-2.1
2,236,001	+		GFF2218	0.45	+0.8
2,236,031	+		GFF2218	0.47	-0.7
2,236,039	+		GFF2218	0.48	-1.3
2,236,039	-		GFF2218	0.48	-0.4
2,236,039	-		GFF2218	0.48	+0.6
2,236,039	-		GFF2218	0.48	+0.6
2,236,049	-		GFF2218	0.48	+0.1
2,236,073	-		GFF2218	0.50	-1.4
2,236,087	+		GFF2218	0.50	-0.3
2,236,092	+		GFF2218	0.51	-1.0
2,236,097	+		GFF2218	0.51	+0.3
2,236,097	+		GFF2218	0.51	+0.5
2,236,097	+		GFF2218	0.51	-0.2
2,236,100	-		GFF2218	0.51	+0.3
2,236,105	-		GFF2218	0.51	-3.2
2,236,105	-		GFF2218	0.51	+0.0
2,236,106	-		GFF2218	0.52	-1.2
2,236,135	-		GFF2218	0.53	-1.6
2,236,172	-		GFF2218	0.56	-0.4
2,236,198	-		GFF2218	0.57	-1.3
2,236,200	+		GFF2218	0.57	+0.1
2,236,200	+		GFF2218	0.57	+0.7
2,236,200	+		GFF2218	0.57	-0.5
2,236,208	-		GFF2218	0.58	+0.7
2,236,212	+		GFF2218	0.58	+1.9
2,236,220	-		GFF2218	0.58	-0.6
2,236,236	+		GFF2218	0.59	-0.6
2,236,236	+		GFF2218	0.59	-2.3
2,236,244	-		GFF2218	0.60	+0.2
2,236,244	-		GFF2218	0.60	-0.1
2,236,252	+		GFF2218	0.60	-0.4
2,236,290	+		GFF2218	0.63	+0.0
2,236,310	+		GFF2218	0.64	-1.0
2,236,310	+		GFF2218	0.64	+0.0
2,236,310	+		GFF2218	0.64	-0.3
2,236,310	+		GFF2218	0.64	+0.7
2,236,310	+		GFF2218	0.64	+0.1
2,236,313	-		GFF2218	0.64	-0.5
2,236,318	-		GFF2218	0.64	-0.5
2,236,320	-		GFF2218	0.64	-0.1
2,236,347	+		GFF2218	0.66	+0.3
2,236,361	-		GFF2218	0.67	-0.3
2,236,409	+		GFF2218	0.70	-1.8
2,236,425	-		GFF2218	0.71	-0.8
2,236,428	+		GFF2218	0.71	-0.5
2,236,453	+		GFF2218	0.72	-0.1
2,236,471	+		GFF2218	0.73	-0.9
2,236,479	-		GFF2218	0.74	+0.1
2,236,479	-		GFF2218	0.74	+1.0
2,236,484	-		GFF2218	0.74	-2.1
2,236,490	+		GFF2218	0.75	-0.5
2,236,528	-		GFF2218	0.77	+0.8
2,236,549	+		GFF2218	0.78	+1.3
2,236,549	+		GFF2218	0.78	-1.7
2,236,559	+		GFF2218	0.79	-0.5
2,236,592	-		GFF2218	0.81	+1.1
2,236,612	+		GFF2218	0.82	-0.2
2,236,617	+		GFF2218	0.82	-0.2
2,236,620	+		GFF2218	0.82	-0.4
2,236,620	+		GFF2218	0.82	-2.4
2,236,622	+		GFF2218	0.82	-1.9
2,236,622	+		GFF2218	0.82	-0.2
2,236,622	+		GFF2218	0.82	-0.5
2,236,628	-		GFF2218	0.83	+1.1
2,236,630	-		GFF2218	0.83	-0.4
2,236,633	-		GFF2218	0.83	-0.7
2,236,643	+		GFF2218	0.84	-1.5
2,236,643	+		GFF2218	0.84	-0.7
2,236,643	+		GFF2218	0.84	-0.2
2,236,651	-		GFF2218	0.84	-1.6
2,236,681	+		GFF2218	0.86	-1.7
2,236,683	+		GFF2218	0.86	-2.9
2,236,695	+		GFF2218	0.87	+0.3
2,236,698	-		GFF2218	0.87	-1.0
2,236,698	-		GFF2218	0.87	+0.9
2,236,698	-		GFF2218	0.87	-1.6
2,236,811	-				+0.6
2,236,816	-				-1.2
2,236,823	-				-0.2
2,236,824	-				-0.5
2,236,835	+				-0.9
2,236,835	+				-0.0
2,236,840	+				-1.7
2,236,843	-				-1.6
2,236,843	-				-0.1
2,236,843	-				-1.3
2,236,843	-				+0.4
2,236,843	-				-1.9
2,236,871	+				+0.1
2,236,940	+		GFF2219	0.16	+0.6
2,236,970	+		GFF2219	0.23	-1.0
2,236,972	+		GFF2219	0.23	-1.4
2,236,984	-		GFF2219	0.26	-1.5
2,236,994	+		GFF2219	0.28	-0.8
2,237,013	+		GFF2219	0.32	-0.5
2,237,044	-		GFF2219	0.39	-1.5
2,237,099	+		GFF2219	0.51	+0.3
2,237,114	+		GFF2219	0.54	+0.4
2,237,193	+		GFF2219	0.71	+0.4
2,237,202	-		GFF2219	0.73	-2.0
2,237,215	-		GFF2219	0.75	-0.8
2,237,249	+		GFF2219	0.83	-0.7
2,237,267	-		GFF2219	0.87	-1.8
2,237,299	+				-0.4
2,237,299	+				-0.6
2,237,307	-				-1.3
2,237,307	-				-0.2
2,237,307	-				+0.9
2,237,307	-				-1.5
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