Strain Fitness in Sphingobium sp. HT1-2 around GFF2217

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,230,639	-				+0.2
2,230,640	-				+0.8
2,230,684	+				-0.1
2,230,685	+				+0.1
2,230,685	+				-0.7
2,230,687	-				+0.7
2,230,693	-				-1.4
2,230,693	-				-0.8
2,230,694	-				+1.6
2,230,698	+				-1.6
2,230,718	-				+0.7
2,230,769	+				-1.3
2,230,778	+				-1.4
2,230,782	-				-1.0
2,230,787	-				-0.9
2,230,852	+				+0.1
2,230,911	-		GFF2216	0.17	+0.3
2,230,928	+		GFF2216	0.19	-1.1
2,230,928	+		GFF2216	0.19	+0.8
2,230,936	+		GFF2216	0.20	-0.3
2,230,936	-		GFF2216	0.20	-0.9
2,230,936	-		GFF2216	0.20	+0.8
2,230,941	+		GFF2216	0.20	+0.5
2,230,949	-		GFF2216	0.21	-0.0
2,230,968	-		GFF2216	0.23	-0.6
2,230,968	-		GFF2216	0.23	+0.7
2,230,968	-		GFF2216	0.23	-0.7
2,230,968	-		GFF2216	0.23	+0.4
2,230,973	+		GFF2216	0.24	+0.4
2,230,973	+		GFF2216	0.24	+0.2
2,230,973	+		GFF2216	0.24	+0.1
2,230,973	+		GFF2216	0.24	-0.9
2,230,981	-		GFF2216	0.25	-0.1
2,230,981	-		GFF2216	0.25	-1.7
2,230,981	-		GFF2216	0.25	-2.1
2,230,981	-		GFF2216	0.25	-2.1
2,230,981	-		GFF2216	0.25	-1.6
2,230,986	+		GFF2216	0.25	-2.6
2,230,989	+		GFF2216	0.26	-1.1
2,230,990	+		GFF2216	0.26	-1.7
2,230,998	-		GFF2216	0.27	+0.8
2,231,000	+		GFF2216	0.27	-0.7
2,231,023	+		GFF2216	0.30	+1.1
2,231,023	+		GFF2216	0.30	+0.7
2,231,031	-		GFF2216	0.31	+0.4
2,231,034	+		GFF2216	0.31	-2.3
2,231,042	-		GFF2216	0.32	+0.0
2,231,072	+		GFF2216	0.35	+0.2
2,231,080	+		GFF2216	0.36	+0.8
2,231,080	-		GFF2216	0.36	+1.0
2,231,093	-		GFF2216	0.38	-1.7
2,231,100	-		GFF2216	0.39	-1.4
2,231,107	+		GFF2216	0.39	+0.7
2,231,153	-		GFF2216	0.45	+0.2
2,231,204	+		GFF2216	0.51	+0.1
2,231,208	+		GFF2216	0.51	+0.8
2,231,210	+		GFF2216	0.51	+0.7
2,231,218	+		GFF2216	0.52	+0.6
2,231,220	+		GFF2216	0.53	+0.1
2,231,220	+		GFF2216	0.53	+0.5
2,231,228	-		GFF2216	0.54	-0.9
2,231,228	-		GFF2216	0.54	-0.3
2,231,228	-		GFF2216	0.54	-1.7
2,231,228	-		GFF2216	0.54	-0.6
2,231,228	-		GFF2216	0.54	-2.8
2,231,237	+		GFF2216	0.55	-0.1
2,231,237	+		GFF2216	0.55	-0.6
2,231,237	+		GFF2216	0.55	+0.1
2,231,237	+		GFF2216	0.55	-1.8
2,231,237	+		GFF2216	0.55	+1.6
2,231,237	+		GFF2216	0.55	-0.6
2,231,246	-		GFF2216	0.56	-1.2
2,231,246	-		GFF2216	0.56	-0.2
2,231,256	+		GFF2216	0.57	-2.1
2,231,264	-		GFF2216	0.58	-1.3
2,231,295	-		GFF2216	0.61	+0.5
2,231,322	+		GFF2216	0.64	-1.5
2,231,323	+		GFF2216	0.65	+0.0
2,231,329	+		GFF2216	0.65	-2.1
2,231,331	-		GFF2216	0.66	-0.5
2,231,331	-		GFF2216	0.66	+0.3
2,231,337	-		GFF2216	0.66	+1.0
2,231,337	-		GFF2216	0.66	-0.9
2,231,337	-		GFF2216	0.66	-1.0
2,231,341	+		GFF2216	0.67	-0.4
2,231,431	-		GFF2216	0.77	-0.1
2,231,458	-		GFF2216	0.80	-0.4
2,231,464	+		GFF2216	0.81	+1.2
2,231,476	-		GFF2216	0.82	+0.0
2,231,477	-		GFF2216	0.82	-0.5
2,231,484	+		GFF2216	0.83	+0.7
2,231,488	+		GFF2216	0.84	+0.2
2,231,488	+		GFF2216	0.84	-0.3
2,231,492	-		GFF2216	0.84	+1.4
2,231,498	+		GFF2216	0.85	-0.8
2,231,503	-		GFF2216	0.85	-1.3
2,231,554	+				+0.5
2,231,585	+				+0.6
2,231,585	+				-0.3
2,231,589	+				-0.8
2,231,593	-				-1.5
2,231,628	-				+0.2
2,231,628	-				+0.3
2,231,647	+				-0.4
2,231,652	+				+0.1
2,231,655	-				-1.0
2,231,660	-				-0.5
2,231,662	-				-1.0
2,231,726	+				-1.3
2,231,767	-				+0.9
2,231,775	+				+0.1
2,231,775	+				-2.9
2,231,775	+				+0.6
2,231,775	+				-0.4
2,231,776	-				-0.1
2,231,781	-				-0.7
2,231,783	-				+0.2
2,231,783	-				-0.4
2,231,783	-				-0.2
2,231,783	-				-1.1
2,231,783	-				-0.1
2,231,783	-				-0.4
2,231,783	-				+0.8
2,231,806	+				-0.1
2,231,814	-				-1.7
2,231,850	+				-0.8
2,231,870	+				+0.1
2,231,880	+				-0.8
2,231,880	+				-0.8
2,231,903	+				-0.0
2,231,927	+				+0.4
2,231,929	+				-0.2
2,231,929	+				-0.1
2,231,929	+				+0.8
2,231,930	-				-1.1
2,231,935	-				-1.4
2,231,937	-				+0.4
2,232,055	+		GFF2217	0.13	-1.4
2,232,055	+		GFF2217	0.13	-2.5
2,232,055	+		GFF2217	0.13	+0.9
2,232,060	+		GFF2217	0.13	-0.7
2,232,060	+		GFF2217	0.13	-0.4
2,232,060	+		GFF2217	0.13	-1.8
2,232,060	+		GFF2217	0.13	-0.2
2,232,070	+		GFF2217	0.13	+1.7
2,232,078	-		GFF2217	0.13	-1.9
2,232,078	-		GFF2217	0.13	-1.6
2,232,078	-		GFF2217	0.13	-1.9
2,232,078	-		GFF2217	0.13	-0.0
2,232,087	-		GFF2217	0.13	-0.9
2,232,151	+		GFF2217	0.15	-1.3
2,232,151	+		GFF2217	0.15	-0.2
2,232,151	+		GFF2217	0.15	-1.1
2,232,151	+		GFF2217	0.15	-0.2
2,232,159	-		GFF2217	0.16	-1.4
2,232,159	-		GFF2217	0.16	-1.1
2,232,159	-		GFF2217	0.16	+0.3
2,232,159	-		GFF2217	0.16	-1.6
2,232,159	-		GFF2217	0.16	+0.2
2,232,175	+		GFF2217	0.16	+1.1
2,232,178	-		GFF2217	0.16	+0.1
2,232,181	+		GFF2217	0.16	+0.3
2,232,184	-		GFF2217	0.16	+0.1
2,232,186	+		GFF2217	0.16	+0.4
2,232,204	+		GFF2217	0.17	+0.6
2,232,204	+		GFF2217	0.17	-0.8
2,232,204	+		GFF2217	0.17	+0.3
2,232,204	+		GFF2217	0.17	+0.1
2,232,209	+		GFF2217	0.17	+0.4
2,232,212	-		GFF2217	0.17	+2.0
2,232,228	-		GFF2217	0.18	-0.8
2,232,243	+		GFF2217	0.18	+0.2
2,232,243	+		GFF2217	0.18	+0.6
2,232,252	+		GFF2217	0.18	-1.6
2,232,262	+		GFF2217	0.19	-0.4
2,232,262	+		GFF2217	0.19	-0.8
2,232,262	+		GFF2217	0.19	+1.0
2,232,270	-		GFF2217	0.19	+1.1
2,232,270	-		GFF2217	0.19	-0.7
2,232,286	+		GFF2217	0.19	-0.3
2,232,286	+		GFF2217	0.19	-0.9
2,232,290	-		GFF2217	0.19	-1.7
2,232,294	-		GFF2217	0.20	-0.6
2,232,294	-		GFF2217	0.20	-0.3
2,232,294	-		GFF2217	0.20	-0.2
2,232,294	-		GFF2217	0.20	+1.2
2,232,294	-		GFF2217	0.20	+0.2
2,232,308	+		GFF2217	0.20	-0.3
2,232,308	+		GFF2217	0.20	-0.6
2,232,316	-		GFF2217	0.20	-0.6
2,232,316	-		GFF2217	0.20	-0.5
2,232,323	+		GFF2217	0.20	-0.1
2,232,323	+		GFF2217	0.20	-0.9
2,232,331	-		GFF2217	0.21	+0.5
2,232,356	-		GFF2217	0.21	+0.9
2,232,402	+		GFF2217	0.23	-0.3
2,232,417	+		GFF2217	0.23	-0.8
2,232,430	-		GFF2217	0.24	-0.0
2,232,431	-		GFF2217	0.24	-1.0
2,232,431	-		GFF2217	0.24	-0.9
2,232,462	-		GFF2217	0.24	-1.4
2,232,462	-		GFF2217	0.24	-0.3
2,232,464	-		GFF2217	0.25	-0.0
2,232,464	-		GFF2217	0.25	-0.1
2,232,474	+		GFF2217	0.25	+0.1
2,232,491	-		GFF2217	0.25	-0.2
2,232,501	+		GFF2217	0.26	-0.4
2,232,510	+		GFF2217	0.26	+0.3
2,232,510	+		GFF2217	0.26	-2.1
2,232,518	-		GFF2217	0.26	-0.6
2,232,518	-		GFF2217	0.26	-1.0
2,232,518	-		GFF2217	0.26	-0.1
2,232,518	-		GFF2217	0.26	-2.1
2,232,527	-		GFF2217	0.26	-2.4
2,232,534	+		GFF2217	0.27	-0.1
2,232,534	+		GFF2217	0.27	-0.5
2,232,542	-		GFF2217	0.27	+0.9
2,232,542	-		GFF2217	0.27	+0.4
2,232,544	+		GFF2217	0.27	+0.1
2,232,547	-		GFF2217	0.27	+0.7
2,232,547	-		GFF2217	0.27	-0.6
2,232,547	-		GFF2217	0.27	+0.7
2,232,547	-		GFF2217	0.27	-0.2
2,232,549	+		GFF2217	0.27	+0.0
2,232,549	+		GFF2217	0.27	-0.5
2,232,557	-		GFF2217	0.27	+1.5
2,232,576	+		GFF2217	0.28	-0.2
2,232,604	-		GFF2217	0.29	+0.7
2,232,609	+		GFF2217	0.29	-0.3
2,232,624	+		GFF2217	0.29	-0.4
2,232,634	+		GFF2217	0.29	-1.6
2,232,634	+		GFF2217	0.29	+0.6
2,232,642	-		GFF2217	0.30	-1.6
2,232,648	+		GFF2217	0.30	-0.2
2,232,660	-		GFF2217	0.30	-0.6
2,232,680	-		GFF2217	0.31	+1.8
2,232,680	-		GFF2217	0.31	+0.4
2,232,717	-		GFF2217	0.32	-1.2
2,232,734	+		GFF2217	0.32	-1.1
2,232,740	+		GFF2217	0.33	-0.5
2,232,742	-		GFF2217	0.33	-1.5
2,232,745	+		GFF2217	0.33	+0.5
2,232,753	-		GFF2217	0.33	-1.3
2,232,764	-		GFF2217	0.33	-0.0
2,232,764	-		GFF2217	0.33	+1.0
2,232,773	+		GFF2217	0.34	+0.3
2,232,774	-		GFF2217	0.34	-0.2
2,232,774	-		GFF2217	0.34	-1.2
2,232,774	-		GFF2217	0.34	-2.0
2,232,774	-		GFF2217	0.34	-0.1
2,232,796	+		GFF2217	0.34	-0.2
2,232,798	+		GFF2217	0.34	+0.5
2,232,798	+		GFF2217	0.34	+0.2
2,232,826	+		GFF2217	0.35	-1.4
2,232,826	+		GFF2217	0.35	-1.2
2,232,854	-		GFF2217	0.36	+0.4
2,232,854	-		GFF2217	0.36	-1.3
2,232,883	+		GFF2217	0.37	-0.7
2,232,903	+		GFF2217	0.37	+0.1
2,232,903	+		GFF2217	0.37	-1.0
2,232,903	+		GFF2217	0.37	-0.0
2,232,911	-		GFF2217	0.38	-0.1
2,232,911	-		GFF2217	0.38	+0.1
2,232,911	-		GFF2217	0.38	-0.0
2,232,917	+		GFF2217	0.38	+0.7
2,232,921	-		GFF2217	0.38	-0.9
2,232,965	-		GFF2217	0.39	-1.4
2,232,975	+		GFF2217	0.39	-0.6
2,232,975	+		GFF2217	0.39	+0.0
2,232,975	+		GFF2217	0.39	+0.4
2,232,975	+		GFF2217	0.39	-0.3
2,232,978	-		GFF2217	0.40	-0.3
2,232,980	+		GFF2217	0.40	-0.2
2,232,980	+		GFF2217	0.40	-0.3
2,232,980	+		GFF2217	0.40	+0.0
2,232,980	+		GFF2217	0.40	-0.5
2,232,982	-		GFF2217	0.40	+0.3
2,232,983	-		GFF2217	0.40	+0.1
2,232,983	-		GFF2217	0.40	+1.1
2,232,983	-		GFF2217	0.40	-1.3
2,232,983	-		GFF2217	0.40	-0.3
2,232,983	-		GFF2217	0.40	-0.9
2,232,983	-		GFF2217	0.40	+1.3
2,232,983	-		GFF2217	0.40	-1.1
2,232,988	-		GFF2217	0.40	-0.7
2,232,988	-		GFF2217	0.40	+0.2
2,232,988	-		GFF2217	0.40	-1.3
2,232,988	-		GFF2217	0.40	-0.3
2,233,009	+		GFF2217	0.40	-0.7
2,233,017	-		GFF2217	0.41	-1.0
2,233,017	-		GFF2217	0.41	-0.2
2,233,042	+		GFF2217	0.41	+1.0
2,233,051	+		GFF2217	0.42	+0.1
2,233,051	+		GFF2217	0.42	-0.2
2,233,051	+		GFF2217	0.42	-0.4
2,233,051	+		GFF2217	0.42	+0.5
2,233,051	+		GFF2217	0.42	-0.5
2,233,051	+		GFF2217	0.42	-0.4
2,233,051	+		GFF2217	0.42	-0.4
2,233,051	+		GFF2217	0.42	+0.2
2,233,051	+		GFF2217	0.42	+0.7
2,233,057	+		GFF2217	0.42	+0.4
2,233,059	-		GFF2217	0.42	-1.2
2,233,059	-		GFF2217	0.42	-0.6
2,233,059	-		GFF2217	0.42	+0.7
2,233,072	+		GFF2217	0.42	-2.1
2,233,089	+		GFF2217	0.43	-0.1
2,233,099	+		GFF2217	0.43	-0.7
2,233,099	+		GFF2217	0.43	-1.9
2,233,107	+		GFF2217	0.43	-1.1
2,233,108	-		GFF2217	0.43	+0.9
2,233,115	-		GFF2217	0.44	-0.9
2,233,115	-		GFF2217	0.44	-1.5
2,233,129	-		GFF2217	0.44	+0.9
2,233,143	-		GFF2217	0.44	-0.2
2,233,149	+		GFF2217	0.45	-2.1
2,233,149	+		GFF2217	0.45	-1.1
2,233,149	+		GFF2217	0.45	+0.4
2,233,149	+		GFF2217	0.45	+0.9
2,233,154	+		GFF2217	0.45	+0.2
2,233,154	+		GFF2217	0.45	-1.3
2,233,154	+		GFF2217	0.45	+0.4
2,233,154	+		GFF2217	0.45	-0.7
2,233,154	+		GFF2217	0.45	+0.2
2,233,154	+		GFF2217	0.45	-2.6
2,233,154	+		GFF2217	0.45	-0.3
2,233,154	+		GFF2217	0.45	+0.3
2,233,162	-		GFF2217	0.45	-0.1
2,233,162	-		GFF2217	0.45	-1.5
2,233,162	-		GFF2217	0.45	-1.4
2,233,162	-		GFF2217	0.45	-1.2
2,233,162	-		GFF2217	0.45	-2.7
2,233,162	-		GFF2217	0.45	+0.2
2,233,162	-		GFF2217	0.45	+0.8
2,233,162	-		GFF2217	0.45	+0.2
2,233,162	-		GFF2217	0.45	+0.0
2,233,162	-		GFF2217	0.45	+0.3
2,233,162	-		GFF2217	0.45	-0.2
2,233,162	-		GFF2217	0.45	-0.0
2,233,164	-		GFF2217	0.45	-0.7
2,233,166	+		GFF2217	0.45	-0.1
2,233,166	+		GFF2217	0.45	+0.3
2,233,167	-		GFF2217	0.45	-0.1
2,233,170	-		GFF2217	0.45	-1.1
2,233,204	+		GFF2217	0.46	-0.6
2,233,209	+		GFF2217	0.46	-1.7
2,233,209	+		GFF2217	0.46	-2.3
2,233,212	-		GFF2217	0.46	-0.1
2,233,217	-		GFF2217	0.47	-0.1
2,233,217	-		GFF2217	0.47	+0.5
2,233,236	+		GFF2217	0.47	+0.7
2,233,236	+		GFF2217	0.47	-0.1
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