Strain Fitness in Sphingobium sp. HT1-2 around GFF1914

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,937,829	+		GFF1913	0.61	-1.0
1,937,836	-		GFF1913	0.62	-1.3
1,937,857	+		GFF1913	0.63	-1.2
1,937,873	+		GFF1913	0.63	+0.6
1,937,879	+		GFF1913	0.64	+0.8
1,937,879	+		GFF1913	0.64	-0.6
1,937,879	+		GFF1913	0.64	-0.3
1,937,881	-		GFF1913	0.64	-1.2
1,937,883	+		GFF1913	0.64	+0.2
1,937,883	+		GFF1913	0.64	-0.8
1,937,883	+		GFF1913	0.64	+0.7
1,937,887	-		GFF1913	0.64	-0.3
1,937,887	-		GFF1913	0.64	+0.0
1,937,891	-		GFF1913	0.64	-0.8
1,937,891	-		GFF1913	0.64	-0.6
1,937,891	-		GFF1913	0.64	-1.0
1,937,897	-		GFF1913	0.64	+0.3
1,937,897	-		GFF1913	0.64	+1.6
1,937,904	+		GFF1913	0.65	+0.9
1,937,927	+		GFF1913	0.65	-0.7
1,937,940	+		GFF1913	0.66	-0.7
1,937,946	+		GFF1913	0.66	-0.6
1,937,954	-		GFF1913	0.67	+1.6
1,937,954	-		GFF1913	0.67	+0.5
1,937,963	+		GFF1913	0.67	-0.2
1,937,963	+		GFF1913	0.67	-1.7
1,937,963	+		GFF1913	0.67	-0.3
1,937,963	+		GFF1913	0.67	+0.8
1,937,963	+		GFF1913	0.67	-0.3
1,937,963	+		GFF1913	0.67	-1.3
1,937,963	+		GFF1913	0.67	+0.3
1,937,963	+		GFF1913	0.67	-0.5
1,937,963	+		GFF1913	0.67	-0.9
1,937,963	+		GFF1913	0.67	-0.2
1,937,963	+		GFF1913	0.67	-1.7
1,937,963	+		GFF1913	0.67	-0.2
1,937,963	+		GFF1913	0.67	+0.2
1,937,963	+		GFF1913	0.67	+0.3
1,937,970	-		GFF1913	0.67	-0.5
1,937,971	-		GFF1913	0.67	+1.8
1,937,971	-		GFF1913	0.67	+0.3
1,937,971	-		GFF1913	0.67	+0.9
1,937,971	-		GFF1913	0.67	-1.8
1,937,971	-		GFF1913	0.67	-0.0
1,937,971	-		GFF1913	0.67	+0.6
1,937,971	-		GFF1913	0.67	+0.2
1,937,971	-		GFF1913	0.67	-1.6
1,937,971	-		GFF1913	0.67	-0.1
1,937,976	-		GFF1913	0.67	-0.1
1,937,976	-		GFF1913	0.67	+0.7
1,937,985	+		GFF1913	0.68	+0.2
1,937,992	-		GFF1913	0.68	+0.4
1,938,000	-		GFF1913	0.68	+1.2
1,938,015	+		GFF1913	0.69	-1.8
1,938,043	+		GFF1913	0.70	-0.3
1,938,065	+		GFF1913	0.71	+0.6
1,938,073	-		GFF1913	0.71	+0.3
1,938,073	-		GFF1913	0.71	+0.5
1,938,088	-		GFF1913	0.72	+0.4
1,938,090	+		GFF1913	0.72	+0.3
1,938,136	-		GFF1913	0.74	-0.9
1,938,143	-		GFF1913	0.74	+1.1
1,938,148	-		GFF1913	0.75	+0.4
1,938,152	-		GFF1913	0.75	-1.9
1,938,174	+		GFF1913	0.76	-1.0
1,938,182	+		GFF1913	0.76	+1.1
1,938,182	-		GFF1913	0.76	-0.6
1,938,182	-		GFF1913	0.76	-1.5
1,938,184	+		GFF1913	0.76	-0.1
1,938,184	+		GFF1913	0.76	-1.8
1,938,184	+		GFF1913	0.76	+1.0
1,938,192	+		GFF1913	0.76	+0.0
1,938,192	-		GFF1913	0.76	-0.0
1,938,192	-		GFF1913	0.76	-1.6
1,938,192	-		GFF1913	0.76	-1.2
1,938,192	-		GFF1913	0.76	-0.3
1,938,192	-		GFF1913	0.76	-0.6
1,938,200	-		GFF1913	0.77	-1.5
1,938,200	-		GFF1913	0.77	-2.6
1,938,207	+		GFF1913	0.77	+0.4
1,938,207	+		GFF1913	0.77	+0.3
1,938,207	+		GFF1913	0.77	+1.1
1,938,207	+		GFF1913	0.77	-0.2
1,938,207	+		GFF1913	0.77	-1.8
1,938,215	-		GFF1913	0.77	-1.2
1,938,215	-		GFF1913	0.77	+0.6
1,938,215	-		GFF1913	0.77	+0.2
1,938,215	-		GFF1913	0.77	+1.0
1,938,215	-		GFF1913	0.77	-0.5
1,938,217	+		GFF1913	0.77	+0.5
1,938,223	-		GFF1913	0.78	-0.7
1,938,223	-		GFF1913	0.78	-0.6
1,938,223	-		GFF1913	0.78	+0.1
1,938,223	-		GFF1913	0.78	-1.5
1,938,225	+		GFF1913	0.78	+0.2
1,938,225	+		GFF1913	0.78	-0.5
1,938,233	-		GFF1913	0.78	-0.1
1,938,233	-		GFF1913	0.78	-0.2
1,938,245	+		GFF1913	0.78	-0.1
1,938,279	-		GFF1913	0.80	-1.3
1,938,283	+		GFF1913	0.80	+0.6
1,938,283	+		GFF1913	0.80	+0.2
1,938,283	+		GFF1913	0.80	-0.2
1,938,283	+		GFF1913	0.80	-0.2
1,938,283	+		GFF1913	0.80	+0.1
1,938,283	+		GFF1913	0.80	-1.1
1,938,291	-		GFF1913	0.80	-0.2
1,938,291	-		GFF1913	0.80	-0.7
1,938,291	-		GFF1913	0.80	-0.3
1,938,293	+		GFF1913	0.80	-1.8
1,938,296	-		GFF1913	0.81	-1.2
1,938,296	-		GFF1913	0.81	+0.1
1,938,298	+		GFF1913	0.81	+1.0
1,938,301	-		GFF1913	0.81	+0.4
1,938,301	-		GFF1913	0.81	-0.8
1,938,306	-		GFF1913	0.81	-0.5
1,938,306	-		GFF1913	0.81	+1.0
1,938,352	+		GFF1913	0.83	-0.8
1,938,354	-		GFF1913	0.83	+0.2
1,938,360	-		GFF1913	0.83	-0.5
1,938,373	+		GFF1913	0.84	-0.8
1,938,373	+		GFF1913	0.84	-2.2
1,938,373	+		GFF1913	0.84	+1.1
1,938,373	+		GFF1913	0.84	-1.3
1,938,373	+		GFF1913	0.84	+0.9
1,938,373	+		GFF1913	0.84	-0.2
1,938,381	-		GFF1913	0.84	-0.7
1,938,381	-		GFF1913	0.84	+1.1
1,938,381	-		GFF1913	0.84	-1.4
1,938,400	-		GFF1913	0.85	-3.0
1,938,403	-		GFF1913	0.85	-0.7
1,938,411	+		GFF1913	0.85	-0.1
1,938,429	+		GFF1913	0.86	+0.8
1,938,432	-		GFF1913	0.86	-3.3
1,938,437	-		GFF1913	0.86	+0.7
1,938,462	+		GFF1913	0.87	-0.7
1,938,470	-		GFF1913	0.88	-1.4
1,938,470	-		GFF1913	0.88	-1.0
1,938,487	+		GFF1913	0.88	+0.4
1,938,488	+		GFF1913	0.88	+0.2
1,938,495	-		GFF1913	0.89	-0.3
1,938,496	-		GFF1913	0.89	+1.2
1,938,496	-		GFF1913	0.89	-3.4
1,938,500	-		GFF1913	0.89	+0.1
1,938,505	-		GFF1913	0.89	-0.3
1,938,537	-				+0.4
1,938,542	-				+0.4
1,938,544	+				+0.1
1,938,552	-				-0.7
1,938,552	-				+0.4
1,938,568	-				-0.3
1,938,573	+				-0.2
1,938,610	+				-1.8
1,938,619	-				+0.5
1,938,621	+				+0.2
1,938,662	-				+0.4
1,938,689	-				-0.8
1,938,697	+				-1.8
1,938,715	+				+1.1
1,938,718	-				-0.6
1,938,731	+				+0.9
1,938,741	+				-0.3
1,938,765	+				-0.8
1,938,765	+				+0.1
1,938,766	+				+0.6
1,938,766	+				+0.5
1,938,774	-				+0.0
1,938,779	-				+0.9
1,938,780	-				-1.8
1,938,826	-				-0.6
1,938,826	-				-0.5
1,938,847	-				+0.7
1,938,887	+		GFF1914	0.21	-1.6
1,938,889	+		GFF1914	0.22	-1.7
1,938,955	+		GFF1914	0.45	+0.2
1,938,956	+		GFF1914	0.46	+0.0
1,938,963	-		GFF1914	0.48	-0.7
1,939,014	+		GFF1914	0.66	+0.5
1,939,016	+		GFF1914	0.67	-1.7
1,939,022	-		GFF1914	0.69	+0.7
1,939,039	+		GFF1914	0.75	-0.6
1,939,083	+				-1.5
1,939,116	+				-0.3
1,939,130	+				-0.5
1,939,136	-				-2.3
1,939,138	-				-1.7
1,939,138	-				+1.1
1,939,145	+				+0.3
1,939,225	+				-1.5
1,939,268	+				+0.4
1,939,268	+				-1.7
1,939,492	-		GFF1915	0.89	+0.4
1,939,494	+				-1.0
1,939,502	+				+0.3
1,939,502	+				+0.4
1,939,502	+				-1.5
1,939,502	+				+1.0
1,939,502	+				+0.1
1,939,502	+				-0.5
1,939,502	+				-1.3
1,939,502	+				-1.1
1,939,510	-				+0.8
1,939,510	-				+1.2
1,939,510	-				-1.3
1,939,510	-				-1.5
1,939,512	+				-0.2
1,939,540	+				-1.3
1,939,547	+				+1.2
1,939,547	+				+1.6
1,939,553	+				+0.2
1,939,563	+				-0.3
1,939,576	+				-0.6