Strain Fitness in Sphingobium sp. HT1-2 around GFF1521

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,550,440	+		GFF1520	0.35	-0.7
1,550,448	-		GFF1520	0.35	+0.5
1,550,474	-		GFF1520	0.37	-0.6
1,550,481	+		GFF1520	0.38	-1.2
1,550,481	-		GFF1520	0.38	+1.2
1,550,481	-		GFF1520	0.38	+0.2
1,550,517	-		GFF1520	0.40	-2.4
1,550,564	-		GFF1520	0.44	-0.3
1,550,570	+		GFF1520	0.44	+0.5
1,550,570	+		GFF1520	0.44	-0.7
1,550,570	+		GFF1520	0.44	-0.5
1,550,570	+		GFF1520	0.44	-0.9
1,550,578	-		GFF1520	0.45	+0.1
1,550,578	-		GFF1520	0.45	-0.2
1,550,578	-		GFF1520	0.45	+1.7
1,550,578	-		GFF1520	0.45	-1.3
1,550,578	-		GFF1520	0.45	+0.3
1,550,578	-		GFF1520	0.45	-0.5
1,550,619	-		GFF1520	0.47	-1.1
1,550,629	+		GFF1520	0.48	-0.5
1,550,629	+		GFF1520	0.48	-0.2
1,550,629	+		GFF1520	0.48	-1.2
1,550,629	+		GFF1520	0.48	-1.3
1,550,637	-		GFF1520	0.49	+0.8
1,550,637	-		GFF1520	0.49	+0.5
1,550,639	+		GFF1520	0.49	-1.3
1,550,639	+		GFF1520	0.49	+1.1
1,550,647	-		GFF1520	0.49	-0.1
1,550,647	-		GFF1520	0.49	+1.0
1,550,647	-		GFF1520	0.49	+0.8
1,550,667	+		GFF1520	0.51	-0.9
1,550,683	+		GFF1520	0.52	+0.1
1,550,686	+		GFF1520	0.52	+0.1
1,550,686	+		GFF1520	0.52	+0.2
1,550,698	-		GFF1520	0.53	-1.3
1,550,705	-		GFF1520	0.54	-0.3
1,550,715	+		GFF1520	0.54	-0.5
1,550,715	+		GFF1520	0.54	-0.1
1,550,717	+		GFF1520	0.54	-0.2
1,550,725	-		GFF1520	0.55	-1.8
1,550,729	-		GFF1520	0.55	-0.0
1,550,746	-		GFF1520	0.56	-2.8
1,550,752	+		GFF1520	0.57	-0.9
1,550,754	+		GFF1520	0.57	-0.8
1,550,766	+		GFF1520	0.58	-0.5
1,550,769	-		GFF1520	0.58	-1.5
1,550,779	+		GFF1520	0.59	-0.5
1,550,793	-		GFF1520	0.60	+0.7
1,550,800	+		GFF1520	0.60	+0.7
1,550,800	+		GFF1520	0.60	-1.3
1,550,800	+		GFF1520	0.60	+0.3
1,550,800	+		GFF1520	0.60	-1.6
1,550,800	+		GFF1520	0.60	+0.3
1,550,800	+		GFF1520	0.60	-0.2
1,550,800	+		GFF1520	0.60	+0.8
1,550,800	+		GFF1520	0.60	-0.3
1,550,800	+		GFF1520	0.60	+1.5
1,550,800	+		GFF1520	0.60	+0.1
1,550,800	+		GFF1520	0.60	+0.6
1,550,800	+		GFF1520	0.60	-0.2
1,550,800	+		GFF1520	0.60	-1.6
1,550,800	+		GFF1520	0.60	-0.2
1,550,800	+		GFF1520	0.60	+0.0
1,550,800	+		GFF1520	0.60	-0.4
1,550,800	+		GFF1520	0.60	+1.9
1,550,800	+		GFF1520	0.60	+0.2
1,550,800	+		GFF1520	0.60	-0.3
1,550,800	+		GFF1520	0.60	-0.7
1,550,800	+		GFF1520	0.60	-0.4
1,550,800	+		GFF1520	0.60	-0.5
1,550,800	+		GFF1520	0.60	-1.1
1,550,800	+		GFF1520	0.60	-1.3
1,550,800	+		GFF1520	0.60	-0.1
1,550,800	+		GFF1520	0.60	-1.3
1,550,800	+		GFF1520	0.60	-1.6
1,550,800	+		GFF1520	0.60	+0.4
1,550,800	+		GFF1520	0.60	+2.0
1,550,800	+		GFF1520	0.60	+0.2
1,550,800	+		GFF1520	0.60	-0.0
1,550,800	+		GFF1520	0.60	-0.7
1,550,800	+		GFF1520	0.60	+1.1
1,550,800	+		GFF1520	0.60	+0.5
1,550,800	+		GFF1520	0.60	-0.3
1,550,800	+		GFF1520	0.60	+0.4
1,550,800	+		GFF1520	0.60	-0.0
1,550,800	+		GFF1520	0.60	-1.2
1,550,800	+		GFF1520	0.60	-0.3
1,550,800	+		GFF1520	0.60	+1.2
1,550,800	+		GFF1520	0.60	-1.2
1,550,800	+		GFF1520	0.60	+0.6
1,550,800	+		GFF1520	0.60	+0.5
1,550,800	+		GFF1520	0.60	-1.0
1,550,800	+		GFF1520	0.60	+1.1
1,550,800	+		GFF1520	0.60	+0.2
1,550,800	+		GFF1520	0.60	+0.4
1,550,800	+		GFF1520	0.60	-2.0
1,550,800	+		GFF1520	0.60	+2.0
1,550,800	+		GFF1520	0.60	+1.7
1,550,800	+		GFF1520	0.60	-0.3
1,550,800	+		GFF1520	0.60	-0.8
1,550,800	+		GFF1520	0.60	+0.3
1,550,800	+		GFF1520	0.60	-0.5
1,550,800	+		GFF1520	0.60	+0.3
1,550,800	+		GFF1520	0.60	-2.2
1,550,800	+		GFF1520	0.60	-0.3
1,550,800	+		GFF1520	0.60	+0.1
1,550,800	+		GFF1520	0.60	+0.2
1,550,800	+		GFF1520	0.60	+0.1
1,550,808	-		GFF1520	0.61	-0.3
1,550,808	-		GFF1520	0.61	+1.1
1,550,808	-		GFF1520	0.61	-1.6
1,550,808	-		GFF1520	0.61	-0.3
1,550,808	-		GFF1520	0.61	-0.9
1,550,808	-		GFF1520	0.61	-0.6
1,550,808	-		GFF1520	0.61	+0.3
1,550,808	-		GFF1520	0.61	-0.8
1,550,808	-		GFF1520	0.61	-0.4
1,550,808	-		GFF1520	0.61	-0.6
1,550,808	-		GFF1520	0.61	+1.3
1,550,808	-		GFF1520	0.61	-0.8
1,550,808	-		GFF1520	0.61	+0.9
1,550,808	-		GFF1520	0.61	-1.7
1,550,808	-		GFF1520	0.61	-0.9
1,550,808	-		GFF1520	0.61	-1.2
1,550,808	-		GFF1520	0.61	-0.6
1,550,808	-		GFF1520	0.61	+1.2
1,550,808	-		GFF1520	0.61	+0.2
1,550,808	-		GFF1520	0.61	+0.3
1,550,808	-		GFF1520	0.61	-0.4
1,550,808	-		GFF1520	0.61	+0.6
1,550,808	-		GFF1520	0.61	-0.3
1,550,808	-		GFF1520	0.61	+0.1
1,550,808	-		GFF1520	0.61	-0.2
1,550,808	-		GFF1520	0.61	+1.4
1,550,808	-		GFF1520	0.61	-2.1
1,550,808	-		GFF1520	0.61	-0.8
1,550,808	-		GFF1520	0.61	+0.5
1,550,808	-		GFF1520	0.61	+0.5
1,550,808	-		GFF1520	0.61	-0.2
1,550,808	-		GFF1520	0.61	-1.3
1,550,808	-		GFF1520	0.61	-0.3
1,550,808	-		GFF1520	0.61	-0.2
1,550,808	-		GFF1520	0.61	-0.5
1,550,808	-		GFF1520	0.61	+0.4
1,550,808	-		GFF1520	0.61	+0.2
1,550,808	-		GFF1520	0.61	+0.2
1,550,808	-		GFF1520	0.61	+0.5
1,550,808	-		GFF1520	0.61	+1.0
1,550,808	-		GFF1520	0.61	-0.1
1,550,808	-		GFF1520	0.61	+1.0
1,550,808	-		GFF1520	0.61	+0.2
1,550,808	-		GFF1520	0.61	+0.0
1,550,808	-		GFF1520	0.61	+0.4
1,550,808	-		GFF1520	0.61	+0.4
1,550,808	-		GFF1520	0.61	-0.4
1,550,808	-		GFF1520	0.61	-1.2
1,550,808	-		GFF1520	0.61	-0.2
1,550,808	-		GFF1520	0.61	+0.5
1,550,808	-		GFF1520	0.61	+0.4
1,550,808	-		GFF1520	0.61	-0.6
1,550,819	+		GFF1520	0.62	+0.3
1,550,819	+		GFF1520	0.62	-1.3
1,550,827	-		GFF1520	0.62	+0.1
1,550,860	+		GFF1520	0.65	+0.1
1,550,865	+		GFF1520	0.65	-0.1
1,550,868	-		GFF1520	0.65	+0.0
1,550,868	-		GFF1520	0.65	-0.8
1,550,873	-		GFF1520	0.65	+1.1
1,550,878	-		GFF1520	0.66	+1.7
1,550,878	-		GFF1520	0.66	+0.5
1,550,878	-		GFF1520	0.66	+2.0
1,550,880	-		GFF1520	0.66	-2.1
1,550,882	-		GFF1520	0.66	+1.7
1,550,901	-		GFF1520	0.67	+0.2
1,550,911	-		GFF1520	0.68	-0.3
1,550,913	+		GFF1520	0.68	-0.6
1,550,921	-		GFF1520	0.69	-0.1
1,550,925	+		GFF1520	0.69	-2.8
1,550,952	+		GFF1520	0.71	+0.0
1,550,953	+		GFF1520	0.71	-0.5
1,550,953	+		GFF1520	0.71	-0.7
1,550,953	+		GFF1520	0.71	+0.2
1,550,960	-		GFF1520	0.72	-0.2
1,550,960	-		GFF1520	0.72	+0.4
1,550,960	-		GFF1520	0.72	-0.5
1,550,961	-		GFF1520	0.72	+0.0
1,550,961	-		GFF1520	0.72	-0.4
1,550,961	-		GFF1520	0.72	+0.4
1,550,961	-		GFF1520	0.72	+0.4
1,550,961	-		GFF1520	0.72	+0.0
1,550,996	+		GFF1520	0.74	+0.2
1,551,004	-		GFF1520	0.75	+0.6
1,551,004	-		GFF1520	0.75	-0.4
1,551,014	+		GFF1520	0.75	-0.5
1,551,041	+		GFF1520	0.77	+0.2
1,551,062	+		GFF1520	0.79	-0.2
1,551,082	+		GFF1520	0.80	+0.4
1,551,085	-		GFF1520	0.80	-0.3
1,551,089	+		GFF1520	0.81	-1.7
1,551,089	-		GFF1520	0.81	+0.7
1,551,112	+		GFF1520	0.82	-0.5
1,551,112	-		GFF1520	0.82	-0.6
1,551,112	-		GFF1520	0.82	-0.9
1,551,114	+		GFF1520	0.83	-0.2
1,551,114	-		GFF1520	0.83	-2.0
1,551,116	+		GFF1520	0.83	+0.7
1,551,153	+		GFF1520	0.85	-1.3
1,551,161	+		GFF1520	0.86	-0.9
1,551,161	+		GFF1520	0.86	-1.6
1,551,169	-		GFF1520	0.86	-0.9
1,551,169	-		GFF1520	0.86	-0.1
1,551,171	+		GFF1520	0.87	-0.0
1,551,255	-				-1.0
1,551,270	+				-1.0
1,551,270	+				+0.1
1,551,270	+				-1.0
1,551,270	+				-0.3
1,551,270	+				-1.2
1,551,278	-				-0.4
1,551,278	-				-0.1
1,551,278	-				+0.6
1,551,282	-				+0.3
1,551,302	-				-0.1
1,551,315	+				-1.3
1,551,318	-				-2.5
1,551,378	+				+0.5
1,551,386	-				-0.6
1,551,386	-				-0.3
1,551,389	+				+0.1
1,551,462	+		GFF1521	0.15	+0.2
1,551,482	+		GFF1521	0.28	-2.5
1,551,522	-		GFF1521	0.55	-0.7
1,551,536	+		GFF1521	0.64	+0.2
1,551,536	+		GFF1521	0.64	-0.8
1,551,540	+		GFF1521	0.67	-0.2
1,551,548	-		GFF1521	0.72	-1.5
1,551,585	+				-0.6
1,551,585	+				+1.1
1,551,593	-				+0.0
1,551,629	+				-1.1
1,551,629	+				-1.7
1,551,629	+				+0.7
1,551,778	+				-0.8
1,551,798	-				-1.1
1,551,866	+				-1.1
1,551,866	+				-0.6
1,551,866	+				-0.0
1,551,866	+				+0.8
1,551,866	+				-0.9
1,551,866	+				+0.4
1,551,866	+				-0.5
1,551,874	-				+0.7
1,551,874	-				+0.7
1,551,876	+				+0.3
1,551,876	+				-0.7
1,551,884	-				-0.0
1,551,884	-				+1.1
1,551,903	+				-0.7
1,551,914	+				+0.1
1,551,914	+				-1.5
1,551,919	+				-0.3
1,551,922	-				-1.1
1,551,922	-				-1.1
1,551,922	-				+0.5
1,551,924	+				-0.9
1,551,924	+				-0.8
1,551,924	+				-1.8
1,551,927	-				-2.8
1,551,927	-				-1.5
1,551,932	-				+0.3
1,551,932	-				-0.4
1,551,968	-				-0.5
1,551,976	-				+0.6
1,551,987	-				+0.6
1,551,987	-				-0.3
1,552,022	-		GFF1523	0.12	-0.4
1,552,025	+		GFF1523	0.12	+2.0
1,552,030	-		GFF1523	0.12	+1.5
1,552,041	+		GFF1523	0.13	-0.3
1,552,053	+		GFF1523	0.14	-0.3
1,552,064	+		GFF1523	0.15	+0.3
1,552,077	-		GFF1523	0.16	+0.4
1,552,084	+		GFF1523	0.16	-1.3
1,552,084	+		GFF1523	0.16	-1.0
1,552,084	+		GFF1523	0.16	+0.4
1,552,084	+		GFF1523	0.16	+0.4
1,552,084	+		GFF1523	0.16	-0.2
1,552,084	+		GFF1523	0.16	-0.8
1,552,091	+		GFF1523	0.17	-1.1
1,552,091	+		GFF1523	0.17	+1.8
1,552,092	-		GFF1523	0.17	-1.6
1,552,092	-		GFF1523	0.17	-1.1
1,552,098	+		GFF1523	0.17	-0.8
1,552,098	+		GFF1523	0.17	-1.0
1,552,105	+		GFF1523	0.18	+0.5
1,552,106	+		GFF1523	0.18	-0.6
1,552,106	+		GFF1523	0.18	+0.6
1,552,109	-		GFF1523	0.18	-1.1
1,552,113	-		GFF1523	0.19	-0.1
1,552,113	-		GFF1523	0.19	-0.8
1,552,113	-		GFF1523	0.19	+0.0
1,552,113	-		GFF1523	0.19	-1.3
1,552,113	-		GFF1523	0.19	+0.8
1,552,124	+		GFF1523	0.19	+0.1
1,552,132	-		GFF1523	0.20	-0.6
1,552,170	-		GFF1523	0.23	-0.9
1,552,215	+		GFF1523	0.26	-0.7
1,552,217	-		GFF1523	0.26	+0.7
1,552,223	-		GFF1523	0.27	+0.3
1,552,227	-		GFF1523	0.27	+0.9
1,552,260	-		GFF1523	0.30	+0.1
1,552,264	+		GFF1523	0.30	-0.5
1,552,267	+		GFF1523	0.30	-2.1
1,552,267	+		GFF1523	0.30	-0.5
1,552,267	+		GFF1523	0.30	-0.4
1,552,267	+		GFF1523	0.30	+0.7
1,552,267	-		GFF1523	0.30	+0.3
1,552,272	-		GFF1523	0.31	+1.0
1,552,275	-		GFF1523	0.31	-2.0
1,552,275	-		GFF1523	0.31	-0.0
1,552,275	-		GFF1523	0.31	-0.6
1,552,288	+		GFF1523	0.32	+0.2
1,552,288	+		GFF1523	0.32	-0.9
1,552,288	+		GFF1523	0.32	+0.7
1,552,288	+		GFF1523	0.32	+0.2
1,552,288	+		GFF1523	0.32	-1.2
1,552,288	+		GFF1523	0.32	-1.9
1,552,296	-		GFF1523	0.32	-0.8
1,552,298	+		GFF1523	0.33	-0.8
1,552,298	+		GFF1523	0.33	+0.2
1,552,303	+		GFF1523	0.33	+0.1
1,552,303	+		GFF1523	0.33	-0.7
1,552,303	+		GFF1523	0.33	+0.2
1,552,306	-		GFF1523	0.33	+0.1
1,552,306	-		GFF1523	0.33	-0.0
1,552,306	-		GFF1523	0.33	+0.4
1,552,306	-		GFF1523	0.33	-0.0
1,552,308	+		GFF1523	0.33	-1.3
1,552,308	+		GFF1523	0.33	+0.5
1,552,308	+		GFF1523	0.33	+0.9
1,552,308	+		GFF1523	0.33	-1.6
1,552,308	+		GFF1523	0.33	-1.0
1,552,308	+		GFF1523	0.33	-0.9
1,552,308	+		GFF1523	0.33	-2.0
1,552,308	+		GFF1523	0.33	-0.5
1,552,308	+		GFF1523	0.33	-0.2
1,552,308	+		GFF1523	0.33	-1.2
1,552,308	+		GFF1523	0.33	-2.0
1,552,311	-		GFF1523	0.34	+0.5
1,552,311	-		GFF1523	0.34	-1.1
1,552,316	-		GFF1523	0.34	-0.3
1,552,316	-		GFF1523	0.34	-1.3
1,552,316	-		GFF1523	0.34	-0.5
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