Strain Fitness in Sphingobium sp. HT1-2 around GFF1413

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,441,570	+		GFF1412	0.24	-0.5
1,441,575	+		GFF1412	0.25	-0.2
1,441,580	+		GFF1412	0.25	+0.5
1,441,580	+		GFF1412	0.25	+0.5
1,441,589	-		GFF1412	0.26	-0.4
1,441,596	-		GFF1412	0.27	+1.5
1,441,596	-		GFF1412	0.27	-0.4
1,441,654	-		GFF1412	0.32	-3.0
1,441,668	+		GFF1412	0.33	-0.4
1,441,684	+		GFF1412	0.34	-1.7
1,441,692	-		GFF1412	0.35	-0.6
1,441,705	+		GFF1412	0.36	-0.4
1,441,708	+		GFF1412	0.36	+0.1
1,441,708	+		GFF1412	0.36	-0.7
1,441,716	-		GFF1412	0.37	+1.0
1,441,717	+		GFF1412	0.37	-1.0
1,441,747	+		GFF1412	0.39	-1.8
1,441,762	+		GFF1412	0.41	-0.4
1,441,765	-		GFF1412	0.41	-0.7
1,441,766	-		GFF1412	0.41	-0.2
1,441,775	+		GFF1412	0.42	-0.5
1,441,780	+		GFF1412	0.42	+0.6
1,441,783	-		GFF1412	0.43	-0.3
1,441,783	-		GFF1412	0.43	-0.7
1,441,783	-		GFF1412	0.43	+0.1
1,441,798	+		GFF1412	0.44	+0.4
1,441,811	+		GFF1412	0.45	-0.0
1,441,867	-		GFF1412	0.50	-0.2
1,441,876	+		GFF1412	0.50	-0.2
1,441,877	+		GFF1412	0.51	-0.9
1,441,885	-		GFF1412	0.51	-0.8
1,441,885	-		GFF1412	0.51	-1.5
1,441,885	-		GFF1412	0.51	+0.2
1,441,889	-		GFF1412	0.52	-0.2
1,441,900	-		GFF1412	0.53	-1.1
1,441,913	+		GFF1412	0.54	-1.7
1,441,932	-		GFF1412	0.55	+0.3
1,441,932	-		GFF1412	0.55	-1.4
1,441,936	-		GFF1412	0.56	-0.6
1,441,938	+		GFF1412	0.56	-1.0
1,441,945	-		GFF1412	0.56	-0.9
1,441,958	+		GFF1412	0.57	-0.4
1,441,958	+		GFF1412	0.57	-0.6
1,441,966	-		GFF1412	0.58	-0.1
1,441,966	-		GFF1412	0.58	-0.5
1,441,966	-		GFF1412	0.58	-2.1
1,441,966	-		GFF1412	0.58	+0.5
1,441,966	-		GFF1412	0.58	+0.3
1,441,973	+		GFF1412	0.59	-1.5
1,441,973	+		GFF1412	0.59	-0.2
1,441,978	+		GFF1412	0.59	-0.2
1,442,011	+		GFF1412	0.62	-0.4
1,442,011	+		GFF1412	0.62	-0.4
1,442,011	+		GFF1412	0.62	-0.1
1,442,019	-		GFF1412	0.63	+1.2
1,442,030	+		GFF1412	0.64	-0.1
1,442,031	-		GFF1412	0.64	-2.4
1,442,034	-		GFF1412	0.64	-1.2
1,442,038	-		GFF1412	0.64	-0.4
1,442,044	-		GFF1412	0.65	-0.2
1,442,048	+		GFF1412	0.65	-1.3
1,442,066	+		GFF1412	0.67	-0.4
1,442,073	+		GFF1412	0.67	+0.6
1,442,092	+		GFF1412	0.69	+0.5
1,442,100	-		GFF1412	0.70	-1.1
1,442,117	-		GFF1412	0.71	+0.7
1,442,127	-		GFF1412	0.72	-1.9
1,442,132	-		GFF1412	0.72	-1.9
1,442,140	-		GFF1412	0.73	-2.6
1,442,146	-		GFF1412	0.73	-2.2
1,442,148	+		GFF1412	0.74	-1.1
1,442,156	-		GFF1412	0.74	+1.1
1,442,174	-		GFF1412	0.76	-0.1
1,442,190	+		GFF1412	0.77	-1.1
1,442,190	+		GFF1412	0.77	+0.2
1,442,190	+		GFF1412	0.77	-0.6
1,442,190	+		GFF1412	0.77	-0.4
1,442,190	+		GFF1412	0.77	-1.5
1,442,190	+		GFF1412	0.77	-1.0
1,442,190	+		GFF1412	0.77	-0.2
1,442,190	+		GFF1412	0.77	-1.4
1,442,190	+		GFF1412	0.77	+1.0
1,442,190	+		GFF1412	0.77	-1.3
1,442,190	+		GFF1412	0.77	+0.7
1,442,190	+		GFF1412	0.77	+1.1
1,442,198	-		GFF1412	0.78	+0.5
1,442,198	-		GFF1412	0.78	+0.9
1,442,198	-		GFF1412	0.78	-0.1
1,442,198	-		GFF1412	0.78	+0.1
1,442,198	-		GFF1412	0.78	-0.3
1,442,198	-		GFF1412	0.78	-1.3
1,442,198	-		GFF1412	0.78	+0.3
1,442,198	-		GFF1412	0.78	-0.1
1,442,198	-		GFF1412	0.78	-0.2
1,442,219	+		GFF1412	0.80	-0.3
1,442,227	-		GFF1412	0.80	-0.0
1,442,234	+		GFF1412	0.81	+0.6
1,442,238	+		GFF1412	0.81	-0.6
1,442,238	+		GFF1412	0.81	-1.2
1,442,246	-		GFF1412	0.82	-2.1
1,442,246	-		GFF1412	0.82	-0.4
1,442,248	+		GFF1412	0.82	-0.0
1,442,248	+		GFF1412	0.82	-0.7
1,442,262	+		GFF1412	0.83	-0.8
1,442,262	+		GFF1412	0.83	-0.3
1,442,262	+		GFF1412	0.83	-2.9
1,442,262	+		GFF1412	0.83	+0.0
1,442,262	+		GFF1412	0.83	-0.2
1,442,262	+		GFF1412	0.83	+1.8
1,442,262	+		GFF1412	0.83	-0.6
1,442,262	+		GFF1412	0.83	+0.4
1,442,270	-		GFF1412	0.84	-0.4
1,442,270	-		GFF1412	0.84	-0.3
1,442,270	-		GFF1412	0.84	+0.3
1,442,270	-		GFF1412	0.84	+0.1
1,442,270	-		GFF1412	0.84	-0.5
1,442,317	+		GFF1412	0.88	-1.4
1,442,317	+		GFF1412	0.88	-0.7
1,442,317	+		GFF1412	0.88	+0.7
1,442,317	+		GFF1412	0.88	-0.4
1,442,317	+		GFF1412	0.88	-1.6
1,442,321	+		GFF1412	0.88	+1.1
1,442,331	+		GFF1412	0.89	-0.9
1,442,340	-				+0.0
1,442,343	+				-2.7
1,442,372	-				-0.4
1,442,386	-				-0.6
1,442,405	-				-1.5
1,442,412	+				+1.3
1,442,412	+				+1.9
1,442,412	+				-0.1
1,442,412	+				+0.2
1,442,412	+				+0.8
1,442,412	+				+0.9
1,442,412	+				+1.0
1,442,412	+				+0.5
1,442,412	+				+0.9
1,442,412	+				-0.5
1,442,412	+				-0.5
1,442,412	+				-0.1
1,442,412	+				-0.4
1,442,412	+				-0.8
1,442,412	+				-0.3
1,442,412	+				-0.7
1,442,412	+				-0.8
1,442,412	+				-1.5
1,442,412	+				-0.3
1,442,412	+				+0.9
1,442,420	-				+0.3
1,442,420	-				-0.9
1,442,420	-				-0.3
1,442,420	-				+1.0
1,442,420	-				-1.4
1,442,420	-				-0.2
1,442,420	-				+0.1
1,442,420	-				+0.5
1,442,420	-				-0.8
1,442,420	-				+0.2
1,442,420	-				-0.3
1,442,420	-				+0.7
1,442,420	-				-1.1
1,442,420	-				-0.0
1,442,420	-				-1.2
1,442,426	+				-0.2
1,442,430	+				+0.3
1,442,438	-				-2.4
1,442,464	+				-0.2
1,442,464	+				-1.2
1,442,466	+				-1.7
1,442,466	+				+0.3
1,442,469	+				+0.9
1,442,471	+				+1.2
1,442,471	+				-2.6
1,442,474	-				-1.8
1,442,474	-				-1.4
1,442,474	-				-0.6
1,442,525	+				+0.4
1,442,537	-				+0.8
1,442,537	-				+1.4
1,442,544	-				-0.0
1,442,565	+				+0.3
1,442,565	+				-2.1
1,442,573	-				-0.3
1,442,577	+				+0.3
1,442,581	+				-1.5
1,442,581	+				+0.0
1,442,581	+				-1.5
1,442,584	-				+0.0
1,442,586	+				+0.7
1,442,589	-				-0.0
1,442,599	+				+1.6
1,442,609	+				-1.6
1,442,635	+				+0.4
1,442,635	+				-0.8
1,442,666	+		GFF1413	0.10	-0.4
1,442,666	+		GFF1413	0.10	-0.7
1,442,672	+		GFF1413	0.11	-0.5
1,442,679	+		GFF1413	0.12	+0.9
1,442,679	+		GFF1413	0.12	-0.5
1,442,679	+		GFF1413	0.12	-2.6
1,442,679	+		GFF1413	0.12	+0.3
1,442,680	-		GFF1413	0.12	+0.6
1,442,687	-		GFF1413	0.12	-1.8
1,442,687	-		GFF1413	0.12	+0.8
1,442,703	+		GFF1413	0.14	-1.9
1,442,708	+		GFF1413	0.15	+0.2
1,442,713	+		GFF1413	0.15	+1.2
1,442,721	-		GFF1413	0.16	+0.5
1,442,758	-		GFF1413	0.20	-0.5
1,442,771	+		GFF1413	0.21	-0.1
1,442,851	-		GFF1413	0.30	+0.5
1,442,864	+		GFF1413	0.31	+1.3
1,442,880	+		GFF1413	0.33	+0.9
1,442,880	+		GFF1413	0.33	-0.7
1,442,880	+		GFF1413	0.33	-0.0
1,442,882	+		GFF1413	0.33	+0.1
1,442,882	+		GFF1413	0.33	+0.6
1,442,882	+		GFF1413	0.33	-1.1
1,442,883	-		GFF1413	0.33	-0.2
1,442,888	-		GFF1413	0.33	-0.4
1,442,888	-		GFF1413	0.33	-0.2
1,442,890	-		GFF1413	0.34	-0.4
1,442,890	-		GFF1413	0.34	+0.1
1,442,890	-		GFF1413	0.34	-2.6
1,442,890	-		GFF1413	0.34	-1.9
1,442,890	-		GFF1413	0.34	-0.9
1,442,897	+		GFF1413	0.34	-0.5
1,442,900	-		GFF1413	0.35	-0.9
1,442,924	+		GFF1413	0.37	-1.4
1,443,009	-		GFF1413	0.46	-1.4
1,443,029	+		GFF1413	0.48	-0.5
1,443,052	-		GFF1413	0.51	-0.3
1,443,060	-		GFF1413	0.51	-0.5
1,443,061	+		GFF1413	0.51	+1.0
1,443,069	-		GFF1413	0.52	+0.1
1,443,071	-		GFF1413	0.53	+0.2
1,443,104	-		GFF1413	0.56	-1.2
1,443,146	-		GFF1413	0.60	+0.9
1,443,161	-		GFF1413	0.62	-0.2
1,443,161	-		GFF1413	0.62	+0.6
1,443,179	+		GFF1413	0.64	+0.0
1,443,193	+		GFF1413	0.65	-0.7
1,443,197	+		GFF1413	0.66	+0.1
1,443,205	+		GFF1413	0.66	-0.0
1,443,233	-		GFF1413	0.69	-1.2
1,443,245	-		GFF1413	0.71	-0.4
1,443,245	-		GFF1413	0.71	-0.6
1,443,252	+		GFF1413	0.71	-1.9
1,443,252	+		GFF1413	0.71	-0.5
1,443,252	+		GFF1413	0.71	+1.7
1,443,252	+		GFF1413	0.71	-1.1
1,443,252	+		GFF1413	0.71	-0.7
1,443,252	+		GFF1413	0.71	-0.2
1,443,252	+		GFF1413	0.71	+0.6
1,443,252	+		GFF1413	0.71	-1.3
1,443,252	+		GFF1413	0.71	+0.0
1,443,260	-		GFF1413	0.72	+0.8
1,443,260	-		GFF1413	0.72	+0.8
1,443,260	-		GFF1413	0.72	-1.1
1,443,260	-		GFF1413	0.72	+0.3
1,443,260	-		GFF1413	0.72	-0.0
1,443,260	-		GFF1413	0.72	+0.6
1,443,260	-		GFF1413	0.72	-0.2
1,443,260	-		GFF1413	0.72	+0.6
1,443,260	-		GFF1413	0.72	-1.3
1,443,270	-		GFF1413	0.73	-0.4
1,443,296	+		GFF1413	0.76	-0.8
1,443,296	+		GFF1413	0.76	-1.7
1,443,299	-		GFF1413	0.76	-2.4
1,443,304	-		GFF1413	0.77	+0.3
1,443,304	-		GFF1413	0.77	+1.2
1,443,333	-		GFF1413	0.80	+0.2
1,443,363	+		GFF1413	0.83	-0.2
1,443,368	+		GFF1413	0.83	+0.1
1,443,371	-		GFF1413	0.84	+0.1
1,443,371	-		GFF1413	0.84	-1.4
1,443,373	+		GFF1413	0.84	+0.4
1,443,373	+		GFF1413	0.84	-0.4
1,443,381	-		GFF1413	0.85	-0.8
1,443,384	+		GFF1413	0.85	+0.7
1,443,402	-		GFF1413	0.87	-0.5
1,443,427	-		GFF1413	0.90	-0.4
1,443,427	-		GFF1413	0.90	-0.9
1,443,427	-		GFF1413	0.90	+0.1
1,443,432	-				-2.2
1,443,432	-				-0.2
1,443,469	+				-0.1
1,443,469	+				-1.2
1,443,469	+				-2.2
1,443,477	-				-0.5
1,443,497	+				-0.9
1,443,504	+				+0.6
1,443,504	+				-0.6
1,443,504	+				-0.8
1,443,504	+				+0.2
1,443,509	+				+1.3
1,443,509	+				-0.9
1,443,512	-				-0.4
1,443,512	-				-1.3
1,443,512	-				+0.7
1,443,514	+				-1.4
1,443,514	+				+0.7
1,443,517	-				-1.8
1,443,522	-				-0.7
1,443,597	+				-0.5
1,443,597	+				-0.0
1,443,597	+				-0.5
1,443,624	-				-0.1
1,443,629	-				-0.4
1,443,638	+				-1.5
1,443,638	+				+0.9
1,443,638	+				-0.8
1,443,638	+				-0.9
1,443,646	-				-0.2
1,443,646	-				-0.6
1,443,651	-				-0.8
1,443,678	+				-0.8
1,443,686	-				+0.7
1,443,696	+				-0.6
1,443,696	+				+0.1
1,443,704	-				-0.1
1,443,704	-				-1.0
1,443,704	-				+0.6
1,443,710	-				-3.0
1,443,728	-				-1.4
1,443,729	-				+0.4
1,443,736	+				+0.7
1,443,736	+				-1.2
1,443,744	-				-0.7
1,443,744	-				+0.1
1,443,746	+				-1.2
1,443,746	+				+0.0
1,443,746	+				-1.5
1,443,746	+				-1.3
1,443,746	+				+0.5
1,443,747	+				+1.0
1,443,754	-				-1.1
1,443,754	-				-0.1
1,443,754	-				+0.1
1,443,754	-				-0.5
1,443,754	-				-1.5
1,443,754	-				-0.9
1,443,754	-				-0.7
1,443,754	-				-0.5
1,443,754	-				-0.3
1,443,754	-				-1.7
1,443,754	-				+0.9
1,443,770	+		GFF1414	0.11	-0.7
1,443,770	+		GFF1414	0.11	-1.3
1,443,770	+		GFF1414	0.11	-1.4
1,443,770	+		GFF1414	0.11	+0.3
1,443,772	+		GFF1414	0.11	-0.5
1,443,772	+		GFF1414	0.11	+0.4
1,443,774	+		GFF1414	0.11	-1.9
1,443,778	-		GFF1414	0.11	-0.7
1,443,778	-		GFF1414	0.11	+0.6
1,443,780	-		GFF1414	0.12	-2.2
1,443,780	-		GFF1414	0.12	-2.9
1,443,782	-		GFF1414	0.12	-1.8
1,443,822	+		GFF1414	0.14	+0.2
1,443,830	+		GFF1414	0.15	+0.4
1,443,830	+		GFF1414	0.15	-1.2
1,443,830	+		GFF1414	0.15	-1.6
1,443,830	+		GFF1414	0.15	+0.1
1,443,830	+		GFF1414	0.15	+0.6
1,443,830	+		GFF1414	0.15	+1.4
1,443,830	+		GFF1414	0.15	+0.6
1,443,830	+		GFF1414	0.15	+1.2
1,443,830	+		GFF1414	0.15	+0.1
1,443,830	+		GFF1414	0.15	+0.4
1,443,830	+		GFF1414	0.15	+1.2
1,443,830	+		GFF1414	0.15	+0.3
1,443,830	+		GFF1414	0.15	+0.3
1,443,830	+		GFF1414	0.15	+0.2
1,443,835	-		GFF1414	0.15	+0.0
1,443,837	+		GFF1414	0.15	+0.5
1,443,838	-		GFF1414	0.15	-1.2
1,443,838	-		GFF1414	0.15	-0.5
1,443,838	-		GFF1414	0.15	+0.3
1,443,838	-		GFF1414	0.15	-0.2
1,443,838	-		GFF1414	0.15	-1.7
1,443,838	-		GFF1414	0.15	-0.4
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