Strain Fitness in Sphingobium sp. HT1-2 around GFF4771

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,766,039	+				+0.9
4,766,083	-				-0.6
4,766,091	+				-1.7
4,766,099	-				-0.1
4,766,131	+				-2.2
4,766,133	+				-0.5
4,766,133	+				-0.5
4,766,133	+				+0.6
4,766,133	+				-0.1
4,766,135	-				-0.9
4,766,136	+				-1.3
4,766,141	-				-0.6
4,766,141	-				-0.1
4,766,141	-				-2.1
4,766,149	-				-2.0
4,766,157	+				-0.1
4,766,157	+				-1.6
4,766,159	+				-0.0
4,766,159	+				-0.4
4,766,159	+				-2.0
4,766,159	+				+0.8
4,766,159	+				-0.7
4,766,165	-				-0.3
4,766,167	-				+0.0
4,766,167	-				-0.5
4,766,169	+				-1.8
4,766,173	+				-0.8
4,766,174	+				-1.5
4,766,174	+				-2.6
4,766,177	-				-2.6
4,766,187	-				-2.1
4,766,219	+				+0.5
4,766,219	+				-1.8
4,766,219	+				-1.0
4,766,219	+				-0.4
4,766,219	+				-1.7
4,766,227	-				+0.3
4,766,237	-				-2.8
4,766,251	-				-0.7
4,766,259	+				-1.1
4,766,269	+				-0.2
4,766,283	-				-0.7
4,766,284	-				-1.1
4,766,296	-				-1.6
4,766,300	+				-0.6
4,766,342	+				-0.9
4,766,409	+		GFF4771	0.12	+1.2
4,766,409	+		GFF4771	0.12	-0.1
4,766,409	+		GFF4771	0.12	-1.5
4,766,417	-		GFF4771	0.13	+0.0
4,766,417	-		GFF4771	0.13	+1.1
4,766,417	-		GFF4771	0.13	-0.8
4,766,417	-		GFF4771	0.13	-0.4
4,766,423	+		GFF4771	0.13	+0.2
4,766,423	+		GFF4771	0.13	-0.5
4,766,446	-		GFF4771	0.15	-2.3
4,766,448	+		GFF4771	0.15	+0.2
4,766,456	-		GFF4771	0.15	-0.1
4,766,473	-		GFF4771	0.16	-0.7
4,766,478	+		GFF4771	0.17	-0.4
4,766,486	-		GFF4771	0.17	-0.1
4,766,504	+		GFF4771	0.18	-0.1
4,766,515	+		GFF4771	0.19	+0.7
4,766,570	+		GFF4771	0.22	-0.1
4,766,570	+		GFF4771	0.22	-0.8
4,766,578	-		GFF4771	0.23	+1.2
4,766,617	-		GFF4771	0.25	+0.4
4,766,617	-		GFF4771	0.25	-0.8
4,766,619	-		GFF4771	0.25	-0.8
4,766,646	-		GFF4771	0.27	-0.6
4,766,668	+		GFF4771	0.28	-0.6
4,766,668	+		GFF4771	0.28	-1.7
4,766,673	+		GFF4771	0.28	-1.6
4,766,673	+		GFF4771	0.28	+0.7
4,766,678	+		GFF4771	0.28	-1.7
4,766,691	+		GFF4771	0.29	+1.3
4,766,711	+		GFF4771	0.30	-0.1
4,766,767	-		GFF4771	0.34	-1.0
4,766,767	-		GFF4771	0.34	-0.5
4,766,767	-		GFF4771	0.34	-1.6
4,766,805	-		GFF4771	0.36	-0.9
4,766,820	-		GFF4771	0.37	-0.1
4,766,864	-		GFF4771	0.40	-0.5
4,766,877	-		GFF4771	0.40	-0.1
4,766,910	+		GFF4771	0.42	-0.5
4,766,917	+		GFF4771	0.43	-1.5
4,766,917	+		GFF4771	0.43	-0.7
4,766,917	+		GFF4771	0.43	-1.0
4,766,918	+		GFF4771	0.43	-0.5
4,766,918	+		GFF4771	0.43	-0.4
4,766,918	+		GFF4771	0.43	-2.3
4,766,925	-		GFF4771	0.43	+0.1
4,766,970	-		GFF4771	0.46	+0.2
4,766,986	+		GFF4771	0.47	-0.4
4,766,998	-		GFF4771	0.47	+0.5
4,767,015	-		GFF4771	0.49	+0.1
4,767,015	-		GFF4771	0.49	-0.7
4,767,023	-		GFF4771	0.49	+0.4
4,767,032	+		GFF4771	0.50	+0.5
4,767,040	-		GFF4771	0.50	-1.6
4,767,042	-		GFF4771	0.50	+0.7
4,767,089	-		GFF4771	0.53	-0.3
4,767,110	+		GFF4771	0.54	-1.1
4,767,121	+		GFF4771	0.55	-0.6
4,767,121	+		GFF4771	0.55	-0.6
4,767,162	+		GFF4771	0.57	-0.6
4,767,172	+		GFF4771	0.58	-1.2
4,767,172	+		GFF4771	0.58	-0.5
4,767,172	+		GFF4771	0.58	-0.1
4,767,172	+		GFF4771	0.58	-1.7
4,767,175	-		GFF4771	0.58	-1.2
4,767,177	+		GFF4771	0.58	+0.7
4,767,177	+		GFF4771	0.58	-0.6
4,767,177	+		GFF4771	0.58	-0.4
4,767,180	-		GFF4771	0.58	+0.3
4,767,180	-		GFF4771	0.58	+0.7
4,767,180	-		GFF4771	0.58	-0.2
4,767,180	-		GFF4771	0.58	-1.5
4,767,180	-		GFF4771	0.58	+0.3
4,767,180	-		GFF4771	0.58	-1.0
4,767,205	+		GFF4771	0.60	-1.6
4,767,210	+		GFF4771	0.60	-0.7
4,767,212	+		GFF4771	0.60	-0.7
4,767,212	+		GFF4771	0.60	-0.3
4,767,218	-		GFF4771	0.61	-0.3
4,767,218	-		GFF4771	0.61	-0.8
4,767,218	-		GFF4771	0.61	-0.0
4,767,220	-		GFF4771	0.61	-0.6
4,767,220	-		GFF4771	0.61	-0.7
4,767,220	-		GFF4771	0.61	-0.4
4,767,230	+		GFF4771	0.61	+1.3
4,767,237	-		GFF4771	0.62	-2.6
4,767,284	+		GFF4771	0.65	-0.1
4,767,310	+		GFF4771	0.66	-1.8
4,767,353	+		GFF4771	0.69	+1.4
4,767,367	-		GFF4771	0.69	-1.2
4,767,399	+		GFF4771	0.71	-1.3
4,767,410	-		GFF4771	0.72	-1.8
4,767,415	-		GFF4771	0.72	-1.0
4,767,427	+		GFF4771	0.73	-0.1
4,767,449	+		GFF4771	0.74	-1.1
4,767,498	-		GFF4771	0.77	-1.7
4,767,501	+		GFF4771	0.77	-1.4
4,767,501	+		GFF4771	0.77	-1.7
4,767,501	+		GFF4771	0.77	-1.0
4,767,543	+		GFF4771	0.80	-0.6
4,767,559	+		GFF4771	0.81	-0.7
4,767,564	+		GFF4771	0.81	-1.1
4,767,564	+		GFF4771	0.81	-1.5
4,767,567	-		GFF4771	0.81	-0.5
4,767,572	-		GFF4771	0.82	-0.8
4,767,577	+		GFF4771	0.82	-0.7
4,767,580	-		GFF4771	0.82	+0.3
4,767,585	-		GFF4771	0.82	+0.4
4,767,587	+		GFF4771	0.83	-0.8
4,767,587	+		GFF4771	0.83	-1.4
4,767,587	+		GFF4771	0.83	-0.2
4,767,587	+		GFF4771	0.83	+0.4
4,767,587	+		GFF4771	0.83	-0.4
4,767,595	-		GFF4771	0.83	-1.8
4,767,595	-		GFF4771	0.83	-0.9
4,767,595	-		GFF4771	0.83	-1.6
4,767,601	+		GFF4771	0.83	-0.2
4,767,602	+		GFF4771	0.83	-1.8
4,767,602	-		GFF4771	0.83	+0.1
4,767,610	-		GFF4771	0.84	-1.7
4,767,629	+		GFF4771	0.85	-0.1
4,767,635	-		GFF4771	0.85	-1.4
4,767,637	-		GFF4771	0.86	-1.8
4,767,637	-		GFF4771	0.86	+0.5
4,767,637	-		GFF4771	0.86	-0.4
4,767,639	+		GFF4771	0.86	-1.1
4,767,649	-		GFF4771	0.86	+0.1
4,767,654	-		GFF4771	0.87	+0.2
4,767,712	+				-0.1
4,767,717	+				+1.4
4,767,745	-				+0.9
4,767,749	-				-1.1
4,767,757	-				+0.5
4,767,765	+				-0.3
4,767,782	-				-2.6
4,767,800	+				+0.5
4,767,822	+				-1.1
4,767,830	-				-2.5
4,767,836	-				+1.0
4,767,866	-				-2.3
4,767,871	-				-0.5
4,767,874	-				-0.3
4,767,884	+				-0.9
4,767,892	+				+0.0
4,767,946	+				-0.6
4,767,946	+				-0.8
4,767,997	+		GFF4772	0.10	-1.0
4,767,997	+		GFF4772	0.10	-2.4
4,768,002	+		GFF4772	0.11	-0.7
4,768,002	+		GFF4772	0.11	+0.2
4,768,003	-		GFF4772	0.11	-0.2
4,768,005	-		GFF4772	0.11	+1.3
4,768,008	+		GFF4772	0.11	+0.6
4,768,025	+		GFF4772	0.13	-2.0
4,768,025	+		GFF4772	0.13	-0.4
4,768,038	-		GFF4772	0.14	-0.2
4,768,040	-		GFF4772	0.14	+0.1
4,768,045	+		GFF4772	0.15	+0.3
4,768,045	+		GFF4772	0.15	-1.2
4,768,050	-		GFF4772	0.15	-0.1
4,768,052	+		GFF4772	0.16	-0.3
4,768,052	+		GFF4772	0.16	+0.1
4,768,055	-		GFF4772	0.16	-0.0
4,768,060	-		GFF4772	0.16	+1.1
4,768,072	-		GFF4772	0.18	-1.0
4,768,101	-		GFF4772	0.21	-0.7
4,768,113	-		GFF4772	0.22	+0.2
4,768,113	-		GFF4772	0.22	-0.1
4,768,126	+		GFF4772	0.23	-1.8
4,768,133	+		GFF4772	0.24	-1.3
4,768,133	+		GFF4772	0.24	-0.1
4,768,133	+		GFF4772	0.24	-1.1
4,768,134	-		GFF4772	0.24	-1.0
4,768,134	-		GFF4772	0.24	-0.3
4,768,134	-		GFF4772	0.24	-2.1
4,768,138	+		GFF4772	0.24	-2.3
4,768,141	-		GFF4772	0.25	+0.5
4,768,141	-		GFF4772	0.25	-2.3
4,768,141	-		GFF4772	0.25	-0.7
4,768,151	-		GFF4772	0.25	+0.8
4,768,154	+		GFF4772	0.26	+0.7
4,768,154	+		GFF4772	0.26	-0.5
4,768,154	+		GFF4772	0.26	+0.2
4,768,162	-		GFF4772	0.27	-1.8
4,768,191	-		GFF4772	0.29	-0.1
4,768,192	+		GFF4772	0.30	-1.1
4,768,223	+		GFF4772	0.33	-0.6
4,768,226	-		GFF4772	0.33	-1.0
4,768,244	+		GFF4772	0.35	-2.1
4,768,250	-		GFF4772	0.35	-0.1
4,768,252	-		GFF4772	0.36	-1.0
4,768,267	+		GFF4772	0.37	-0.8
4,768,267	+		GFF4772	0.37	-1.8
4,768,331	-		GFF4772	0.43	+0.4
4,768,338	-		GFF4772	0.44	+0.3
4,768,340	+		GFF4772	0.44	+0.2
4,768,348	+		GFF4772	0.45	-0.1
4,768,355	+		GFF4772	0.46	-1.0
4,768,355	+		GFF4772	0.46	-0.8
4,768,355	+		GFF4772	0.46	-1.8
4,768,373	-		GFF4772	0.48	+0.9
4,768,384	+		GFF4772	0.49	+0.7
4,768,384	+		GFF4772	0.49	-2.0
4,768,384	+		GFF4772	0.49	-1.7
4,768,384	+		GFF4772	0.49	+0.4
4,768,384	+		GFF4772	0.49	-0.7
4,768,384	+		GFF4772	0.49	+1.0
4,768,384	+		GFF4772	0.49	-0.9
4,768,384	+		GFF4772	0.49	-1.0
4,768,384	+		GFF4772	0.49	-0.1
4,768,384	+		GFF4772	0.49	+0.3
4,768,384	+		GFF4772	0.49	-0.1
4,768,384	+		GFF4772	0.49	+0.3
4,768,384	+		GFF4772	0.49	-0.6
4,768,384	+		GFF4772	0.49	+1.5
4,768,384	+		GFF4772	0.49	-2.1
4,768,384	+		GFF4772	0.49	-1.2
4,768,392	-		GFF4772	0.49	+0.9
4,768,392	-		GFF4772	0.49	-1.0
4,768,392	-		GFF4772	0.49	+0.0
4,768,392	-		GFF4772	0.49	+0.5
4,768,392	-		GFF4772	0.49	-0.6
4,768,392	-		GFF4772	0.49	-0.8
4,768,392	-		GFF4772	0.49	+0.3
4,768,392	-		GFF4772	0.49	-0.5
4,768,392	-		GFF4772	0.49	-0.5
4,768,392	-		GFF4772	0.49	-1.2
4,768,392	-		GFF4772	0.49	+0.3
4,768,392	-		GFF4772	0.49	-1.1
4,768,392	-		GFF4772	0.49	+0.0
4,768,392	-		GFF4772	0.49	-0.6
4,768,392	-		GFF4772	0.49	-0.8
4,768,392	-		GFF4772	0.49	-0.3
4,768,392	-		GFF4772	0.49	-1.1
4,768,392	-		GFF4772	0.49	-1.7
4,768,392	-		GFF4772	0.49	-0.3
4,768,392	-		GFF4772	0.49	-1.1
4,768,392	-		GFF4772	0.49	+0.0
4,768,392	-		GFF4772	0.49	-2.7
4,768,392	-		GFF4772	0.49	-0.1
4,768,392	-		GFF4772	0.49	-2.3
4,768,392	-		GFF4772	0.49	-0.5
4,768,392	-		GFF4772	0.49	+0.6
4,768,392	-		GFF4772	0.49	-0.5
4,768,392	-		GFF4772	0.49	-1.3
4,768,392	-		GFF4772	0.49	-0.5
4,768,392	-		GFF4772	0.49	-0.3
4,768,392	-		GFF4772	0.49	-0.1
4,768,392	-		GFF4772	0.49	+0.9
4,768,392	-		GFF4772	0.49	+0.1
4,768,392	-		GFF4772	0.49	+0.4
4,768,392	-		GFF4772	0.49	-0.1
4,768,392	-		GFF4772	0.49	-0.7
4,768,392	-		GFF4772	0.49	-0.1
4,768,392	-		GFF4772	0.49	-0.5
4,768,392	-		GFF4772	0.49	-1.8
4,768,392	-		GFF4772	0.49	-0.1
4,768,392	-		GFF4772	0.49	-0.6
4,768,392	-		GFF4772	0.49	-0.6
4,768,392	-		GFF4772	0.49	-0.1
4,768,448	+		GFF4772	0.55	-1.8
4,768,464	-		GFF4772	0.57	-1.1
4,768,479	+		GFF4772	0.58	-0.6
4,768,485	-		GFF4772	0.59	-0.9
4,768,487	-		GFF4772	0.59	-1.3
4,768,489	+		GFF4772	0.59	-2.0
4,768,489	+		GFF4772	0.59	-0.3
4,768,489	+		GFF4772	0.59	+0.2
4,768,489	+		GFF4772	0.59	+0.2
4,768,489	-		GFF4772	0.59	+0.2
4,768,507	-		GFF4772	0.61	-2.5
4,768,513	-		GFF4772	0.61	+0.3
4,768,513	-		GFF4772	0.61	-0.7
4,768,529	+		GFF4772	0.63	-2.0
4,768,529	+		GFF4772	0.63	+0.8
4,768,529	+		GFF4772	0.63	+0.1
4,768,529	+		GFF4772	0.63	+1.2
4,768,529	+		GFF4772	0.63	-1.6
4,768,537	-		GFF4772	0.64	-1.1
4,768,537	-		GFF4772	0.64	-2.2
4,768,594	+		GFF4772	0.69	-2.1
4,768,597	-		GFF4772	0.70	-1.1
4,768,597	-		GFF4772	0.70	-0.8
4,768,598	+		GFF4772	0.70	-0.7
4,768,619	+		GFF4772	0.72	-0.3
4,768,619	+		GFF4772	0.72	+1.4
4,768,635	-		GFF4772	0.74	+0.3
4,768,654	-		GFF4772	0.75	-0.1
4,768,712	+		GFF4772	0.81	-0.5
4,768,712	+		GFF4772	0.81	-2.5
4,768,737	-		GFF4772	0.84	+0.4
4,768,737	-		GFF4772	0.84	+0.6
4,768,782	+		GFF4772	0.88	-0.0
4,768,790	-		GFF4772	0.89	-0.4
4,768,794	+		GFF4772	0.89	-0.3
4,768,810	+				-1.8
4,768,810	+				-0.8
4,768,867	+				+0.6