Strain Fitness in Sphingobium sp. HT1-2 around GFF4756

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,753,718	+		GFF4754	0.12	-0.7
4,753,751	+		GFF4754	0.24	-0.4
4,753,751	+		GFF4754	0.24	-1.4
4,753,753	+		GFF4754	0.24	-2.0
4,753,769	-		GFF4754	0.30	-1.3
4,753,832	-		GFF4754	0.52	-0.4
4,753,833	-		GFF4754	0.53	+0.8
4,753,874	+		GFF4754	0.67	-0.0
4,753,884	-		GFF4754	0.71	-0.2
4,753,892	-		GFF4754	0.74	+1.0
4,753,892	-		GFF4754	0.74	+1.1
4,753,892	-		GFF4754	0.74	+0.3
4,753,904	+		GFF4754	0.78	-0.9
4,753,927	+		GFF4754	0.86	-0.1
4,753,927	-		GFF4754	0.86	-0.8
4,753,937	+				+0.5
4,753,948	+				+0.3
4,753,954	-				+0.5
4,753,989	-				-0.6
4,754,000	-				-0.2
4,754,006	-				-1.6
4,754,010	-				+0.7
4,754,016	+				-1.7
4,754,025	-				-0.8
4,754,034	+				-1.9
4,754,050	+				+0.2
4,754,050	+				-0.9
4,754,050	+				+0.9
4,754,067	+				+0.1
4,754,067	+				-0.5
4,754,067	+				-1.6
4,754,067	+				-1.7
4,754,067	+				-2.7
4,754,067	+				+0.1
4,754,075	-				+0.8
4,754,075	-				+1.2
4,754,075	-				-0.7
4,754,075	-				+0.9
4,754,075	-				-0.1
4,754,075	-				-1.2
4,754,077	+				-0.0
4,754,089	-				+1.5
4,754,094	-				-1.4
4,754,145	+		GFF4755	0.13	-0.8
4,754,145	+		GFF4755	0.13	-2.2
4,754,151	+		GFF4755	0.18	-1.7
4,754,156	-		GFF4755	0.23	+1.0
4,754,177	+		GFF4755	0.40	-1.6
4,754,193	+		GFF4755	0.53	-0.9
4,754,220	-		GFF4755	0.76	-0.9
4,754,221	-		GFF4755	0.77	+1.0
4,754,248	-				-0.8
4,754,286	+				+0.5
4,754,301	+				-0.9
4,754,358	-				+0.9
4,754,388	-				-1.0
4,754,400	+				+2.1
4,754,400	+				+0.5
4,754,408	-				-0.0
4,754,408	-				-0.6
4,754,408	-				+0.0
4,754,410	+				-0.5
4,754,410	+				-0.0
4,754,417	-				-0.5
4,754,418	-				-0.5
4,754,418	-				-1.5
4,754,418	-				-0.9
4,754,418	-				-1.7
4,754,428	+				+0.8
4,754,434	+				-0.5
4,754,476	-				-0.1
4,754,476	-				-0.3
4,754,523	+				+0.2
4,754,531	-				+0.5
4,754,531	-				+0.3
4,754,576	-				+0.5
4,754,580	+				+0.3
4,754,581	-				-1.6
4,754,581	-				+1.4
4,754,614	+				-0.1
4,754,615	+				+1.0
4,754,615	+				-0.6
4,754,621	+				+0.6
4,754,623	-				+1.3
4,754,630	-				+0.6
4,754,637	-				+0.2
4,754,653	-				-0.6
4,754,659	+				+0.6
4,754,667	-				-0.1
4,754,716	+				+0.8
4,754,718	+				-0.8
4,754,728	+				-0.1
4,754,781	-				+0.3
4,754,793	-				+0.7
4,754,823	-		GFF4756	0.11	-1.2
4,754,850	+		GFF4756	0.13	+0.1
4,754,858	+		GFF4756	0.14	-0.7
4,754,896	-		GFF4756	0.17	+0.3
4,754,910	-		GFF4756	0.18	+0.2
4,754,943	-		GFF4756	0.21	-0.0
4,754,943	-		GFF4756	0.21	+0.9
4,754,948	-		GFF4756	0.22	-1.5
4,754,948	-		GFF4756	0.22	+1.7
4,754,976	+		GFF4756	0.24	+0.8
4,755,009	-		GFF4756	0.27	-0.2
4,755,012	+		GFF4756	0.28	+0.7
4,755,018	-		GFF4756	0.28	+0.7
4,755,041	+		GFF4756	0.30	-0.3
4,755,043	+		GFF4756	0.30	+0.2
4,755,051	-		GFF4756	0.31	-1.2
4,755,095	+		GFF4756	0.35	-1.9
4,755,139	+		GFF4756	0.39	-1.4
4,755,151	+		GFF4756	0.40	+0.0
4,755,151	-		GFF4756	0.40	+0.5
4,755,159	-		GFF4756	0.41	-2.5
4,755,159	-		GFF4756	0.41	+0.1
4,755,166	-		GFF4756	0.41	-0.4
4,755,201	-		GFF4756	0.45	+0.1
4,755,218	+		GFF4756	0.46	+0.3
4,755,226	-		GFF4756	0.47	-2.1
4,755,226	-		GFF4756	0.47	-0.9
4,755,226	-		GFF4756	0.47	-0.7
4,755,259	+		GFF4756	0.50	-3.1
4,755,261	+		GFF4756	0.50	-2.1
4,755,285	-		GFF4756	0.52	-0.5
4,755,303	+		GFF4756	0.54	-1.7
4,755,311	-		GFF4756	0.54	+0.4
4,755,317	-		GFF4756	0.55	-0.8
4,755,317	-		GFF4756	0.55	+1.0
4,755,326	-		GFF4756	0.56	+0.9
4,755,333	+		GFF4756	0.56	+1.0
4,755,333	+		GFF4756	0.56	+0.6
4,755,333	+		GFF4756	0.56	+0.3
4,755,341	-		GFF4756	0.57	+0.9
4,755,342	+		GFF4756	0.57	-1.8
4,755,356	+		GFF4756	0.58	-2.0
4,755,356	+		GFF4756	0.58	+0.7
4,755,364	-		GFF4756	0.59	+1.3
4,755,377	+		GFF4756	0.60	-0.4
4,755,395	+		GFF4756	0.62	-0.5
4,755,395	+		GFF4756	0.62	-0.9
4,755,395	+		GFF4756	0.62	-0.7
4,755,395	+		GFF4756	0.62	+0.9
4,755,400	+		GFF4756	0.62	+0.9
4,755,403	-		GFF4756	0.63	-0.6
4,755,403	-		GFF4756	0.63	-0.5
4,755,403	-		GFF4756	0.63	-0.5
4,755,403	-		GFF4756	0.63	-0.1
4,755,403	-		GFF4756	0.63	-0.8
4,755,403	-		GFF4756	0.63	+0.1
4,755,405	+		GFF4756	0.63	+0.3
4,755,405	+		GFF4756	0.63	+0.1
4,755,405	+		GFF4756	0.63	+0.4
4,755,408	-		GFF4756	0.63	+0.2
4,755,413	-		GFF4756	0.64	-2.0
4,755,421	-		GFF4756	0.64	-0.1
4,755,431	-		GFF4756	0.65	+0.4
4,755,447	-		GFF4756	0.67	+1.1
4,755,447	-		GFF4756	0.67	+0.1
4,755,502	-		GFF4756	0.72	+0.8
4,755,502	-		GFF4756	0.72	+0.1
4,755,504	+		GFF4756	0.72	+0.4
4,755,504	+		GFF4756	0.72	+0.4
4,755,504	+		GFF4756	0.72	+0.1
4,755,504	+		GFF4756	0.72	-0.8
4,755,507	-		GFF4756	0.72	-0.4
4,755,512	-		GFF4756	0.72	+0.7
4,755,512	-		GFF4756	0.72	+0.9
4,755,512	-		GFF4756	0.72	-0.5
4,755,512	-		GFF4756	0.72	-0.1
4,755,519	+		GFF4756	0.73	-0.6
4,755,522	-		GFF4756	0.73	-0.3
4,755,527	-		GFF4756	0.74	-0.4
4,755,555	-		GFF4756	0.76	-0.3
4,755,558	+		GFF4756	0.77	-0.4
4,755,558	+		GFF4756	0.77	-0.3
4,755,558	+		GFF4756	0.77	+0.0
4,755,558	+		GFF4756	0.77	+0.4
4,755,558	+		GFF4756	0.77	+0.5
4,755,563	+		GFF4756	0.77	-0.7
4,755,566	-		GFF4756	0.77	+0.9
4,755,566	-		GFF4756	0.77	-0.8
4,755,566	-		GFF4756	0.77	-0.7
4,755,566	-		GFF4756	0.77	-0.2
4,755,571	-		GFF4756	0.78	-0.5
4,755,585	-		GFF4756	0.79	-0.2
4,755,590	-		GFF4756	0.79	-1.6
4,755,618	+		GFF4756	0.82	-1.7
4,755,623	+		GFF4756	0.82	+0.5
4,755,623	+		GFF4756	0.82	-0.4
4,755,626	-		GFF4756	0.83	-0.5
4,755,631	-		GFF4756	0.83	-2.5
4,755,631	-		GFF4756	0.83	-0.3
4,755,631	-		GFF4756	0.83	-0.0
4,755,631	-		GFF4756	0.83	+0.6
4,755,631	-		GFF4756	0.83	-1.3
4,755,633	+		GFF4756	0.83	-1.4
4,755,652	-		GFF4756	0.85	+0.2
4,755,676	+		GFF4756	0.87	-0.7
4,755,684	-		GFF4756	0.88	-1.7
4,755,684	-		GFF4756	0.88	-0.5
4,755,684	-		GFF4756	0.88	-0.2
4,755,693	-		GFF4756	0.89	+0.4
4,755,698	-		GFF4756	0.89	-0.9
4,755,701	+		GFF4756	0.89	-1.1
4,755,709	-				+0.8
4,755,725	+				+0.5
4,755,728	-				-1.7
4,755,728	-				+0.5
4,755,728	-				+0.3
4,755,734	-				-0.8
4,755,739	-				-1.1
4,755,740	-				-0.9
4,755,755	+				-0.3
4,755,763	-				-0.3
4,755,765	+				-0.6
4,755,765	+				-0.1
4,755,773	-				+0.7
4,755,775	+				+0.4
4,755,775	+				-0.9
4,755,780	+				+0.5
4,755,783	-				+2.1
4,755,783	-				-0.0
4,755,830	+				+0.8
4,755,831	-				+0.6
4,755,838	-				+0.2
4,755,861	+				-0.8
4,755,863	+				-2.0
4,755,863	+				-0.6
4,755,868	+				+0.1
4,755,868	+				-0.8
4,755,868	+				-1.2
4,755,868	+				-0.7
4,755,868	+				-0.8
4,755,868	+				-0.9
4,755,868	+				+1.0
4,755,868	+				-1.2
4,755,868	+				+0.3
4,755,868	+				+0.1
4,755,869	-				-0.8
4,755,871	-				+0.4
4,755,871	-				-1.3
4,755,876	-				-0.2
4,755,876	-				-1.8
4,755,876	-				+1.0
4,755,876	-				+0.2
4,755,876	-				+0.0
4,755,896	+				-0.7
4,755,899	+				-0.7
4,755,909	+				+0.1
4,755,912	-				-0.0
4,755,916	+				-0.6
4,755,916	+				-1.7
4,755,916	+				+0.7
4,755,916	+				-0.8
4,755,916	+				+0.2
4,755,916	+				-2.5
4,755,916	+				+0.3
4,755,916	+				-0.3
4,755,916	+				+0.5
4,755,916	+				+0.3
4,755,921	+				+0.3
4,755,924	-				-1.9
4,755,924	-				-1.1
4,755,924	-				-1.8
4,755,924	-				-0.5
4,755,924	-				-0.1
4,755,924	-				+0.3
4,755,924	-				-0.5
4,755,924	-				-0.8
4,755,924	-				-1.3
4,755,924	-				-0.7
4,755,926	+				-0.6
4,755,931	-				-1.1
4,755,960	+				+0.1
4,755,960	+				-0.5
4,755,960	+				+0.7
4,755,960	+				-0.4
4,755,968	-				+0.4
4,755,968	-				+0.0
4,755,968	-				+0.6
4,755,968	-				+0.1
4,755,968	-				-0.1
4,755,994	+				-1.8
4,756,006	+				+1.0
4,756,014	-				+1.3
4,756,059	+				+0.2
4,756,059	+				-0.5
4,756,060	+				+0.3
4,756,062	+				+0.7
4,756,093	+				+1.5
4,756,093	+				-0.7
4,756,093	+				-1.8
4,756,093	+				+0.8
4,756,093	+				+0.3
4,756,101	-				+0.3
4,756,102	-				-0.5
4,756,117	-				+0.8
4,756,129	-				-0.5
4,756,131	-				-0.1
4,756,139	+				+1.0
4,756,147	-				-1.4
4,756,151	+				-0.1
4,756,158	-		GFF4757	0.11	-0.6
4,756,159	-		GFF4757	0.11	+0.1
4,756,159	-		GFF4757	0.11	+0.5
4,756,199	-		GFF4757	0.25	+0.4
4,756,214	+		GFF4757	0.30	-1.0
4,756,670	-				-0.3
4,756,671	+				-0.2
4,756,684	+				+0.5
4,756,690	+				-1.1
4,756,690	+				+0.5
4,756,698	-				-0.1
4,756,724	+				-1.4
4,756,724	+				-0.1
4,756,724	+				-0.5
4,756,724	+				-1.0
4,756,732	-				-0.4
4,756,732	-				-2.0
4,756,732	-				+0.1
4,756,732	-				-0.1
4,756,732	-				-0.6
4,756,732	-				-0.6
4,756,742	-				-2.3
4,756,744	-				+0.3
4,756,744	-				+1.0
4,756,754	-				+0.6
4,756,759	+				-1.9
4,756,766	-				-1.1
4,756,767	-				-1.8
4,756,767	-				-1.7
4,756,796	-				-0.6