Strain Fitness in Sphingobium sp. HT1-2 around GFF4556

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,546,938	+		GFF4555	0.47	-1.2
4,546,938	+		GFF4555	0.47	+0.0
4,546,938	+		GFF4555	0.47	-0.6
4,546,938	+		GFF4555	0.47	-0.6
4,546,938	+		GFF4555	0.47	-1.1
4,546,938	+		GFF4555	0.47	-2.8
4,546,946	-		GFF4555	0.47	+0.4
4,546,946	-		GFF4555	0.47	-1.0
4,546,946	-		GFF4555	0.47	-0.5
4,546,946	-		GFF4555	0.47	+0.1
4,546,946	-		GFF4555	0.47	-1.9
4,546,957	+		GFF4555	0.48	-1.8
4,546,957	+		GFF4555	0.48	+0.8
4,546,957	+		GFF4555	0.48	+0.6
4,546,963	+		GFF4555	0.48	+0.6
4,546,965	-		GFF4555	0.48	-0.5
4,546,971	-		GFF4555	0.49	+0.6
4,546,981	+		GFF4555	0.49	-0.0
4,546,981	-		GFF4555	0.49	-0.4
4,546,981	-		GFF4555	0.49	-0.1
4,546,998	-		GFF4555	0.50	+0.6
4,546,998	-		GFF4555	0.50	+0.6
4,547,007	-		GFF4555	0.51	-1.5
4,547,031	+		GFF4555	0.53	-0.8
4,547,031	+		GFF4555	0.53	+0.4
4,547,031	+		GFF4555	0.53	+0.2
4,547,031	+		GFF4555	0.53	-3.3
4,547,031	+		GFF4555	0.53	+1.1
4,547,031	+		GFF4555	0.53	+0.5
4,547,036	+		GFF4555	0.53	-0.7
4,547,036	+		GFF4555	0.53	-0.2
4,547,039	-		GFF4555	0.53	-0.3
4,547,039	-		GFF4555	0.53	-0.9
4,547,039	-		GFF4555	0.53	-0.1
4,547,039	-		GFF4555	0.53	+0.1
4,547,039	-		GFF4555	0.53	+0.1
4,547,039	-		GFF4555	0.53	+0.3
4,547,039	-		GFF4555	0.53	-1.7
4,547,044	-		GFF4555	0.53	+0.1
4,547,044	-		GFF4555	0.53	-0.4
4,547,044	-		GFF4555	0.53	-0.2
4,547,044	-		GFF4555	0.53	-0.4
4,547,044	-		GFF4555	0.53	-0.5
4,547,080	+		GFF4555	0.56	-0.5
4,547,083	+		GFF4555	0.56	+0.6
4,547,083	+		GFF4555	0.56	-0.5
4,547,083	-		GFF4555	0.56	-1.6
4,547,084	+		GFF4555	0.56	-0.3
4,547,091	-		GFF4555	0.56	-0.9
4,547,091	-		GFF4555	0.56	-0.5
4,547,091	-		GFF4555	0.56	-0.3
4,547,091	-		GFF4555	0.56	-0.0
4,547,098	+		GFF4555	0.57	+0.4
4,547,098	+		GFF4555	0.57	-0.8
4,547,098	+		GFF4555	0.57	+0.0
4,547,098	+		GFF4555	0.57	+0.4
4,547,098	+		GFF4555	0.57	-1.7
4,547,098	+		GFF4555	0.57	+0.3
4,547,098	+		GFF4555	0.57	+0.6
4,547,098	+		GFF4555	0.57	-1.1
4,547,098	+		GFF4555	0.57	-0.7
4,547,098	+		GFF4555	0.57	+0.8
4,547,098	+		GFF4555	0.57	-0.8
4,547,106	-		GFF4555	0.57	+1.3
4,547,106	-		GFF4555	0.57	+0.0
4,547,106	-		GFF4555	0.57	+0.6
4,547,106	-		GFF4555	0.57	-0.5
4,547,106	-		GFF4555	0.57	-1.2
4,547,106	-		GFF4555	0.57	-0.4
4,547,106	-		GFF4555	0.57	+0.2
4,547,106	-		GFF4555	0.57	-2.9
4,547,106	-		GFF4555	0.57	-1.3
4,547,106	-		GFF4555	0.57	-0.2
4,547,106	-		GFF4555	0.57	+1.1
4,547,113	-		GFF4555	0.58	+0.0
4,547,118	-		GFF4555	0.58	-0.3
4,547,120	+		GFF4555	0.58	-2.0
4,547,132	+		GFF4555	0.59	-2.0
4,547,132	+		GFF4555	0.59	-0.7
4,547,133	-		GFF4555	0.59	-1.7
4,547,140	-		GFF4555	0.60	-0.3
4,547,140	-		GFF4555	0.60	-0.8
4,547,152	+		GFF4555	0.60	-0.3
4,547,157	+		GFF4555	0.61	-2.2
4,547,157	+		GFF4555	0.61	+0.6
4,547,165	-		GFF4555	0.61	-1.2
4,547,189	-		GFF4555	0.63	-0.8
4,547,207	-		GFF4555	0.64	-1.5
4,547,208	-		GFF4555	0.64	-0.4
4,547,208	-		GFF4555	0.64	-2.1
4,547,233	+		GFF4555	0.65	-0.3
4,547,233	+		GFF4555	0.65	-0.5
4,547,233	+		GFF4555	0.65	+0.5
4,547,233	+		GFF4555	0.65	-0.3
4,547,233	+		GFF4555	0.65	+0.1
4,547,235	+		GFF4555	0.66	+1.4
4,547,235	+		GFF4555	0.66	+0.1
4,547,235	+		GFF4555	0.66	-1.1
4,547,235	+		GFF4555	0.66	-1.4
4,547,235	+		GFF4555	0.66	-0.0
4,547,235	+		GFF4555	0.66	-1.1
4,547,241	-		GFF4555	0.66	-0.3
4,547,241	-		GFF4555	0.66	+0.1
4,547,243	-		GFF4555	0.66	+0.5
4,547,243	-		GFF4555	0.66	-1.5
4,547,243	-		GFF4555	0.66	-2.1
4,547,243	-		GFF4555	0.66	-1.2
4,547,243	-		GFF4555	0.66	-0.1
4,547,243	-		GFF4555	0.66	-2.0
4,547,243	-		GFF4555	0.66	-0.4
4,547,254	+		GFF4555	0.67	+0.8
4,547,267	+		GFF4555	0.68	-0.3
4,547,267	+		GFF4555	0.68	-0.1
4,547,275	-		GFF4555	0.68	+0.7
4,547,286	-		GFF4555	0.69	-1.0
4,547,288	+		GFF4555	0.69	+0.6
4,547,288	+		GFF4555	0.69	+0.4
4,547,288	+		GFF4555	0.69	-2.0
4,547,289	-		GFF4555	0.69	-0.6
4,547,296	-		GFF4555	0.69	-0.2
4,547,312	+		GFF4555	0.70	-0.1
4,547,355	-		GFF4555	0.73	-0.3
4,547,355	-		GFF4555	0.73	+1.0
4,547,356	-		GFF4555	0.73	+1.2
4,547,376	+		GFF4555	0.75	-0.5
4,547,384	-		GFF4555	0.75	-0.1
4,547,384	-		GFF4555	0.75	+0.8
4,547,386	-		GFF4555	0.75	-0.4
4,547,386	-		GFF4555	0.75	-2.7
4,547,404	+		GFF4555	0.76	-0.1
4,547,404	+		GFF4555	0.76	-0.3
4,547,409	+		GFF4555	0.77	-1.2
4,547,412	-		GFF4555	0.77	-2.0
4,547,412	-		GFF4555	0.77	+0.2
4,547,412	-		GFF4555	0.77	-0.2
4,547,419	+		GFF4555	0.77	-0.6
4,547,419	+		GFF4555	0.77	-0.3
4,547,419	+		GFF4555	0.77	+0.6
4,547,419	+		GFF4555	0.77	+0.2
4,547,419	+		GFF4555	0.77	+1.3
4,547,419	+		GFF4555	0.77	-0.8
4,547,419	+		GFF4555	0.77	+0.1
4,547,422	-		GFF4555	0.78	-0.6
4,547,427	-		GFF4555	0.78	+1.3
4,547,427	-		GFF4555	0.78	+0.0
4,547,427	-		GFF4555	0.78	-0.9
4,547,432	-		GFF4555	0.78	-1.5
4,547,439	+		GFF4555	0.79	-0.9
4,547,439	+		GFF4555	0.79	-0.5
4,547,447	-		GFF4555	0.79	-1.7
4,547,447	-		GFF4555	0.79	+0.1
4,547,459	+		GFF4555	0.80	-2.5
4,547,459	+		GFF4555	0.80	-2.4
4,547,494	+		GFF4555	0.82	+0.2
4,547,494	+		GFF4555	0.82	-1.0
4,547,502	-		GFF4555	0.83	-0.7
4,547,504	-		GFF4555	0.83	-0.4
4,547,509	+		GFF4555	0.83	-0.2
4,547,527	+		GFF4555	0.84	-1.2
4,547,527	+		GFF4555	0.84	+0.1
4,547,527	+		GFF4555	0.84	+0.1
4,547,527	+		GFF4555	0.84	-1.4
4,547,535	-		GFF4555	0.85	+0.1
4,547,535	-		GFF4555	0.85	-1.3
4,547,535	-		GFF4555	0.85	-0.7
4,547,535	-		GFF4555	0.85	+1.3
4,547,535	-		GFF4555	0.85	-0.4
4,547,535	-		GFF4555	0.85	-1.7
4,547,535	-		GFF4555	0.85	-0.4
4,547,535	-		GFF4555	0.85	+0.6
4,547,557	+		GFF4555	0.86	-0.2
4,547,562	+		GFF4555	0.86	-1.3
4,547,565	-		GFF4555	0.87	-0.2
4,547,567	+		GFF4555	0.87	-0.1
4,547,567	+		GFF4555	0.87	-0.7
4,547,567	+		GFF4555	0.87	-1.5
4,547,567	+		GFF4555	0.87	-0.2
4,547,567	+		GFF4555	0.87	-0.1
4,547,567	+		GFF4555	0.87	+0.6
4,547,567	+		GFF4555	0.87	+0.2
4,547,570	-		GFF4555	0.87	-1.4
4,547,575	-		GFF4555	0.87	+0.7
4,547,575	-		GFF4555	0.87	-0.6
4,547,575	-		GFF4555	0.87	+0.1
4,547,575	-		GFF4555	0.87	+0.5
4,547,583	+		GFF4555	0.88	+0.4
4,547,583	+		GFF4555	0.88	-0.4
4,547,648	+				-1.5
4,547,651	-				+0.2
4,547,671	+				-0.3
4,547,671	+				-0.6
4,547,687	+				-0.6
4,547,697	-				-0.9
4,547,700	-				-0.0
4,547,702	-				-1.4
4,547,713	-				-0.1
4,547,722	+				-1.3
4,547,725	-				-1.0
4,547,735	+				+2.1
4,547,755	+				-1.1
4,547,755	+				-2.1
4,547,796	+				-1.2
4,547,796	+				-0.9
4,547,796	+				-1.1
4,547,807	+				+0.7
4,547,814	-				+0.2
4,547,814	-				-1.5
4,547,815	-				-0.9
4,547,817	+				-1.9
4,547,831	-				-2.1
4,547,833	+				+1.5
4,547,873	-				+0.2
4,547,891	+				-0.4
4,547,926	+				-1.6
4,547,926	+				-0.8
4,547,931	+				-1.4
4,547,931	+				-0.9
4,547,934	-				-0.3
4,547,934	-				-0.3
4,547,936	+				+1.2
4,547,936	+				-0.3
4,547,936	+				-0.3
4,547,939	-				-2.5
4,547,940	+				-2.6
4,547,946	+				-0.8
4,547,954	+				+0.1
4,547,971	-				+0.1
4,547,991	+				-2.2
4,547,991	+				-1.2
4,547,994	-		GFF4556	0.10	-1.0
4,547,998	-		GFF4556	0.11	-0.7
4,547,999	-		GFF4556	0.11	+0.2
4,547,999	-		GFF4556	0.11	-1.9
4,547,999	-		GFF4556	0.11	+0.2
4,548,004	-		GFF4556	0.11	-0.7
4,548,009	+		GFF4556	0.12	-1.0
4,548,009	+		GFF4556	0.12	-0.7
4,548,017	-		GFF4556	0.13	-1.7
4,548,033	+		GFF4556	0.14	+0.4
4,548,046	-		GFF4556	0.15	-0.7
4,548,071	+		GFF4556	0.18	+0.7
4,548,076	+		GFF4556	0.18	-0.8
4,548,076	+		GFF4556	0.18	-1.0
4,548,076	+		GFF4556	0.18	-0.3
4,548,076	+		GFF4556	0.18	-0.5
4,548,081	+		GFF4556	0.19	-1.7
4,548,084	-		GFF4556	0.19	-0.8
4,548,084	-		GFF4556	0.19	-0.3
4,548,084	-		GFF4556	0.19	+0.2
4,548,084	-		GFF4556	0.19	+0.3
4,548,084	-		GFF4556	0.19	-1.8
4,548,084	-		GFF4556	0.19	-0.5
4,548,084	-		GFF4556	0.19	-0.3
4,548,098	+		GFF4556	0.21	+0.3
4,548,098	+		GFF4556	0.21	-0.3
4,548,098	+		GFF4556	0.21	+0.2
4,548,098	+		GFF4556	0.21	-0.7
4,548,098	+		GFF4556	0.21	-0.1
4,548,098	+		GFF4556	0.21	+0.4
4,548,098	+		GFF4556	0.21	-0.2
4,548,098	+		GFF4556	0.21	-0.9
4,548,103	+		GFF4556	0.21	+0.8
4,548,106	-		GFF4556	0.21	-0.4
4,548,106	-		GFF4556	0.21	-0.3
4,548,106	-		GFF4556	0.21	-0.5
4,548,106	-		GFF4556	0.21	-0.3
4,548,106	-		GFF4556	0.21	+0.6
4,548,106	-		GFF4556	0.21	-2.6
4,548,106	-		GFF4556	0.21	-0.6
4,548,106	-		GFF4556	0.21	-1.6
4,548,106	-		GFF4556	0.21	-0.3
4,548,106	-		GFF4556	0.21	-0.7
4,548,106	-		GFF4556	0.21	-0.6
4,548,111	-		GFF4556	0.22	-0.9
4,548,135	-		GFF4556	0.24	+0.3
4,548,141	-		GFF4556	0.25	+0.7
4,548,154	-		GFF4556	0.26	-0.2
4,548,165	-		GFF4556	0.27	-0.5
4,548,170	+		GFF4556	0.28	-0.4
4,548,193	-		GFF4556	0.30	+1.0
4,548,226	+		GFF4556	0.33	+0.5
4,548,234	-		GFF4556	0.34	-1.0
4,548,260	-		GFF4556	0.36	-0.3
4,548,260	-		GFF4556	0.36	-0.7
4,548,291	-		GFF4556	0.40	-0.0
4,548,291	-		GFF4556	0.40	-0.2
4,548,296	-		GFF4556	0.40	+0.6
4,548,308	-		GFF4556	0.41	+0.3
4,548,317	+		GFF4556	0.42	-1.6
4,548,317	+		GFF4556	0.42	-0.4
4,548,317	+		GFF4556	0.42	+2.0
4,548,408	+		GFF4556	0.51	+0.1
4,548,433	+		GFF4556	0.54	-1.6
4,548,440	+		GFF4556	0.54	-0.7
4,548,441	-		GFF4556	0.54	-1.2
4,548,458	-		GFF4556	0.56	-1.0
4,548,481	+		GFF4556	0.58	-1.5
4,548,484	+		GFF4556	0.59	-0.9
4,548,485	+		GFF4556	0.59	-0.1
4,548,486	+		GFF4556	0.59	-0.6
4,548,492	-		GFF4556	0.59	-0.4
4,548,525	-		GFF4556	0.63	-0.3
4,548,544	-		GFF4556	0.64	+0.4
4,548,545	-		GFF4556	0.65	-0.2
4,548,561	-		GFF4556	0.66	+1.0
4,548,561	-		GFF4556	0.66	-0.7
4,548,591	+		GFF4556	0.69	+1.9
4,548,604	-		GFF4556	0.70	+0.5
4,548,622	+		GFF4556	0.72	-0.8
4,548,622	+		GFF4556	0.72	-1.3
4,548,622	+		GFF4556	0.72	+0.0
4,548,628	+		GFF4556	0.73	+0.4
4,548,630	-		GFF4556	0.73	+0.0
4,548,656	+		GFF4556	0.76	+0.4
4,548,664	-		GFF4556	0.76	-0.8
4,548,666	+		GFF4556	0.77	-1.0
4,548,666	+		GFF4556	0.77	-0.7
4,548,674	-		GFF4556	0.77	-1.5
4,548,678	+		GFF4556	0.78	+0.6
4,548,683	-		GFF4556	0.78	-0.9
4,548,712	+		GFF4556	0.81	-0.2
4,548,723	+		GFF4556	0.82	-0.6
4,548,728	+		GFF4556	0.83	-1.1
4,548,728	+		GFF4556	0.83	-0.1
4,548,741	-		GFF4556	0.84	-2.2
4,548,743	+		GFF4556	0.84	-0.6
4,548,743	+		GFF4556	0.84	+0.7
4,548,743	+		GFF4556	0.84	+1.0
4,548,743	+		GFF4556	0.84	-2.0
4,548,743	+		GFF4556	0.84	-1.5
4,548,743	+		GFF4556	0.84	-1.2
4,548,743	+		GFF4556	0.84	-0.5
4,548,743	+		GFF4556	0.84	+0.5
4,548,743	+		GFF4556	0.84	-0.2
4,548,751	-		GFF4556	0.85	-0.2
4,548,751	-		GFF4556	0.85	-0.6
4,548,751	-		GFF4556	0.85	-0.3
4,548,751	-		GFF4556	0.85	-0.7
4,548,751	-		GFF4556	0.85	+0.5
4,548,763	+		GFF4556	0.86	+0.7
4,548,763	+		GFF4556	0.86	-1.4
4,548,763	+		GFF4556	0.86	-0.5
4,548,763	+		GFF4556	0.86	+0.7
4,548,763	+		GFF4556	0.86	+0.1
4,548,771	-		GFF4556	0.87	+0.1
4,548,771	-		GFF4556	0.87	-1.3
4,548,776	-		GFF4556	0.87	-0.4
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