Strain Fitness in Sphingobium sp. HT1-2 around GFF4358

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
4,357,377	+		GFF4357	0.34	-1.0
4,357,377	+		GFF4357	0.34	+0.3
4,357,377	+		GFF4357	0.34	+1.0
4,357,385	-		GFF4357	0.34	-0.1
4,357,439	+		GFF4357	0.38	+0.1
4,357,444	+		GFF4357	0.38	-0.4
4,357,445	+		GFF4357	0.38	+0.9
4,357,455	+		GFF4357	0.39	-2.4
4,357,456	+		GFF4357	0.39	-0.4
4,357,456	+		GFF4357	0.39	-1.7
4,357,470	-		GFF4357	0.40	-3.0
4,357,477	+		GFF4357	0.40	+0.2
4,357,494	-		GFF4357	0.41	-0.2
4,357,505	+		GFF4357	0.42	-1.6
4,357,505	+		GFF4357	0.42	+0.6
4,357,505	+		GFF4357	0.42	+0.2
4,357,505	+		GFF4357	0.42	-0.8
4,357,511	-		GFF4357	0.43	-0.3
4,357,513	+		GFF4357	0.43	+0.2
4,357,513	+		GFF4357	0.43	-1.7
4,357,513	-		GFF4357	0.43	-1.3
4,357,513	-		GFF4357	0.43	+1.2
4,357,513	-		GFF4357	0.43	+0.1
4,357,513	-		GFF4357	0.43	+0.1
4,357,518	+		GFF4357	0.43	+0.6
4,357,518	+		GFF4357	0.43	+0.4
4,357,523	+		GFF4357	0.43	+0.4
4,357,523	+		GFF4357	0.43	+0.8
4,357,526	-		GFF4357	0.44	-0.7
4,357,531	-		GFF4357	0.44	-1.5
4,357,531	-		GFF4357	0.44	-2.5
4,357,533	+		GFF4357	0.44	-1.3
4,357,533	+		GFF4357	0.44	-1.0
4,357,538	+		GFF4357	0.44	+0.4
4,357,546	-		GFF4357	0.45	+0.0
4,357,546	-		GFF4357	0.45	+0.7
4,357,548	-		GFF4357	0.45	-0.7
4,357,548	-		GFF4357	0.45	-0.6
4,357,548	-		GFF4357	0.45	-0.7
4,357,561	-		GFF4357	0.46	+0.2
4,357,581	+		GFF4357	0.47	-0.7
4,357,584	-		GFF4357	0.48	-0.6
4,357,589	-		GFF4357	0.48	-0.8
4,357,591	-		GFF4357	0.48	-0.7
4,357,594	+		GFF4357	0.48	+0.9
4,357,595	+		GFF4357	0.48	-0.2
4,357,595	-		GFF4357	0.48	+0.9
4,357,602	+		GFF4357	0.49	-0.4
4,357,617	-		GFF4357	0.50	+1.0
4,357,621	+		GFF4357	0.50	+1.4
4,357,621	+		GFF4357	0.50	+1.0
4,357,621	+		GFF4357	0.50	-0.3
4,357,621	+		GFF4357	0.50	+0.7
4,357,621	+		GFF4357	0.50	-0.6
4,357,626	+		GFF4357	0.50	-0.5
4,357,634	-		GFF4357	0.51	-0.5
4,357,634	-		GFF4357	0.51	-0.6
4,357,634	-		GFF4357	0.51	-0.2
4,357,658	+		GFF4357	0.52	-0.1
4,357,658	+		GFF4357	0.52	+0.0
4,357,658	+		GFF4357	0.52	-1.5
4,357,658	+		GFF4357	0.52	-0.7
4,357,666	-		GFF4357	0.53	-0.2
4,357,666	-		GFF4357	0.53	-0.1
4,357,666	-		GFF4357	0.53	-0.3
4,357,676	+		GFF4357	0.54	-1.5
4,357,683	-		GFF4357	0.54	-2.9
4,357,694	+		GFF4357	0.55	+0.0
4,357,714	-		GFF4357	0.56	-1.5
4,357,727	+		GFF4357	0.57	+0.4
4,357,728	-		GFF4357	0.57	-0.3
4,357,733	+		GFF4357	0.58	+0.0
4,357,742	-		GFF4357	0.58	-0.2
4,357,744	+		GFF4357	0.58	-0.1
4,357,766	+		GFF4357	0.60	+0.9
4,357,772	+		GFF4357	0.60	-0.9
4,357,780	-		GFF4357	0.61	+0.0
4,357,780	-		GFF4357	0.61	-0.8
4,357,780	-		GFF4357	0.61	-0.1
4,357,782	+		GFF4357	0.61	+0.2
4,357,790	-		GFF4357	0.61	+0.5
4,357,791	+		GFF4357	0.61	-0.4
4,357,799	-		GFF4357	0.62	+0.9
4,357,812	+		GFF4357	0.63	+0.4
4,357,812	+		GFF4357	0.63	-0.1
4,357,820	-		GFF4357	0.63	-0.8
4,357,830	-		GFF4357	0.64	+0.1
4,357,834	+		GFF4357	0.64	-0.7
4,357,869	+		GFF4357	0.67	-0.2
4,357,869	+		GFF4357	0.67	+0.0
4,357,869	+		GFF4357	0.67	-1.7
4,357,869	+		GFF4357	0.67	-1.2
4,357,869	+		GFF4357	0.67	-0.4
4,357,876	-		GFF4357	0.67	-0.3
4,357,877	-		GFF4357	0.67	-0.9
4,357,877	-		GFF4357	0.67	+0.6
4,357,951	+		GFF4357	0.72	+0.7
4,357,951	+		GFF4357	0.72	+1.1
4,357,954	-		GFF4357	0.72	+0.2
4,357,962	+		GFF4357	0.73	-1.9
4,357,992	+		GFF4357	0.75	-0.1
4,357,992	+		GFF4357	0.75	-1.0
4,358,000	-		GFF4357	0.75	+0.1
4,358,000	-		GFF4357	0.75	-0.7
4,358,008	+		GFF4357	0.76	+0.7
4,358,008	+		GFF4357	0.76	-0.2
4,358,008	+		GFF4357	0.76	+0.5
4,358,008	+		GFF4357	0.76	+0.3
4,358,010	-		GFF4357	0.76	+0.3
4,358,016	-		GFF4357	0.77	+0.0
4,358,055	-		GFF4357	0.79	-0.8
4,358,056	+		GFF4357	0.79	+0.7
4,358,064	-		GFF4357	0.80	-0.3
4,358,065	-		GFF4357	0.80	+0.1
4,358,072	+		GFF4357	0.80	+0.3
4,358,072	+		GFF4357	0.80	-0.4
4,358,072	+		GFF4357	0.80	-0.6
4,358,077	+		GFF4357	0.81	-0.5
4,358,077	+		GFF4357	0.81	+0.7
4,358,077	+		GFF4357	0.81	+0.3
4,358,077	+		GFF4357	0.81	-2.2
4,358,085	-		GFF4357	0.81	+0.0
4,358,085	-		GFF4357	0.81	+0.2
4,358,085	-		GFF4357	0.81	-2.1
4,358,085	-		GFF4357	0.81	-0.6
4,358,090	-		GFF4357	0.82	-1.1
4,358,118	+		GFF4357	0.83	-2.2
4,358,154	-		GFF4357	0.86	-0.9
4,358,201	+		GFF4357	0.89	-2.0
4,358,206	+		GFF4357	0.89	+0.9
4,358,206	+		GFF4357	0.89	-0.2
4,358,211	+		GFF4357	0.90	-1.2
4,358,214	-		GFF4357	0.90	-0.8
4,358,249	+				-0.6
4,358,249	+				+0.3
4,358,249	+				-2.2
4,358,249	+				-0.1
4,358,249	+				-0.5
4,358,257	-				-0.9
4,358,257	-				+0.4
4,358,257	-				+0.1
4,358,266	+				-1.7
4,358,266	+				-0.6
4,358,266	+				-0.7
4,358,266	+				+0.4
4,358,274	-				+1.0
4,358,283	+				-0.5
4,358,305	+				-2.2
4,358,317	+				-1.1
4,358,326	-				-0.9
4,358,336	-				+0.1
4,358,344	+				-1.3
4,358,373	+				-0.8
4,358,381	-				-0.5
4,358,392	+				-0.2
4,358,392	+				-0.4
4,358,393	+				-0.1
4,358,393	+				+0.1
4,358,400	-				-1.2
4,358,400	-				-0.2
4,358,401	-				+0.2
4,358,401	-				+1.0
4,358,417	-				-0.5
4,358,417	-				-2.5
4,358,443	+				+0.4
4,358,443	+				+0.3
4,358,451	-		GFF4358	0.10	-0.5
4,358,451	-		GFF4358	0.10	+0.0
4,358,451	-		GFF4358	0.10	+0.2
4,358,475	+		GFF4358	0.13	+0.4
4,358,512	+		GFF4358	0.17	-2.3
4,358,512	+		GFF4358	0.17	-1.1
4,358,519	-		GFF4358	0.18	-2.4
4,358,566	-		GFF4358	0.23	-0.2
4,358,566	-		GFF4358	0.23	+0.0
4,358,578	+		GFF4358	0.24	+1.5
4,358,586	-		GFF4358	0.25	-0.2
4,358,609	+		GFF4358	0.28	+0.3
4,358,622	-		GFF4358	0.29	-1.7
4,358,637	-		GFF4358	0.31	+0.3
4,358,639	+		GFF4358	0.31	+0.4
4,358,639	+		GFF4358	0.31	-0.2
4,358,639	+		GFF4358	0.31	-0.3
4,358,647	-		GFF4358	0.32	+1.5
4,358,649	-		GFF4358	0.32	+0.4
4,358,653	+		GFF4358	0.33	-2.0
4,358,671	+		GFF4358	0.35	-0.7
4,358,671	+		GFF4358	0.35	+0.7
4,358,679	+		GFF4358	0.36	+0.4
4,358,679	-		GFF4358	0.36	+1.1
4,358,679	-		GFF4358	0.36	-2.1
4,358,685	-		GFF4358	0.36	+0.5
4,358,712	+		GFF4358	0.39	+1.2
4,358,717	+		GFF4358	0.40	+0.7
4,358,717	+		GFF4358	0.40	+0.4
4,358,717	+		GFF4358	0.40	+0.2
4,358,717	+		GFF4358	0.40	-0.1
4,358,717	+		GFF4358	0.40	-0.9
4,358,723	-		GFF4358	0.40	+0.5
4,358,725	-		GFF4358	0.41	-1.1
4,358,725	-		GFF4358	0.41	+0.1
4,358,725	-		GFF4358	0.41	+0.1
4,358,725	-		GFF4358	0.41	-0.5
4,358,728	+		GFF4358	0.41	+0.0
4,358,730	-		GFF4358	0.41	-0.9
4,358,733	+		GFF4358	0.42	+0.7
4,358,738	+		GFF4358	0.42	-1.7
4,358,750	-		GFF4358	0.44	-0.9
4,358,756	+		GFF4358	0.44	-1.0
4,358,766	+		GFF4358	0.45	-0.1
4,358,766	+		GFF4358	0.45	-0.3
4,358,766	+		GFF4358	0.45	-0.7
4,358,766	+		GFF4358	0.45	-0.7
4,358,766	+		GFF4358	0.45	+0.5
4,358,766	+		GFF4358	0.45	-0.7
4,358,766	+		GFF4358	0.45	-0.5
4,358,766	-		GFF4358	0.45	-1.3
4,358,772	+		GFF4358	0.46	+0.8
4,358,774	-		GFF4358	0.46	-0.5
4,358,774	-		GFF4358	0.46	-0.1
4,358,779	-		GFF4358	0.47	-1.6
4,358,790	-		GFF4358	0.48	-1.6
4,358,790	-		GFF4358	0.48	-1.1
4,358,819	+		GFF4358	0.51	-1.8
4,358,830	+		GFF4358	0.52	-0.8
4,358,846	+		GFF4358	0.54	-1.9
4,358,915	+		GFF4358	0.62	+0.5
4,358,915	+		GFF4358	0.62	-0.8
4,358,920	+		GFF4358	0.63	+1.0
4,358,920	+		GFF4358	0.63	+0.5
4,358,923	-		GFF4358	0.63	-1.2
4,358,928	-		GFF4358	0.63	+0.6
4,358,928	-		GFF4358	0.63	+0.1
4,358,944	+		GFF4358	0.65	-0.2
4,358,952	-		GFF4358	0.66	-2.2
4,358,952	-		GFF4358	0.66	+1.3
4,358,954	-		GFF4358	0.66	-1.6
4,358,966	-		GFF4358	0.68	+0.6
4,358,971	-		GFF4358	0.68	-0.1
4,358,979	+		GFF4358	0.69	+0.4
4,358,995	-		GFF4358	0.71	+1.3
4,359,001	-		GFF4358	0.72	+1.1
4,359,025	+		GFF4358	0.74	-0.9
4,359,025	+		GFF4358	0.74	-0.7
4,359,033	-		GFF4358	0.75	-0.8
4,359,033	-		GFF4358	0.75	-0.7
4,359,035	+		GFF4358	0.75	-2.5
4,359,035	+		GFF4358	0.75	-2.2
4,359,043	-		GFF4358	0.76	-0.7
4,359,058	+		GFF4358	0.78	+0.6
4,359,064	-		GFF4358	0.79	-0.5
4,359,084	-		GFF4358	0.81	-2.0
4,359,088	+		GFF4358	0.81	-0.2
4,359,106	+		GFF4358	0.83	-0.2
4,359,111	+		GFF4358	0.84	+0.6
4,359,111	+		GFF4358	0.84	-0.3
4,359,111	+		GFF4358	0.84	-1.5
4,359,111	+		GFF4358	0.84	+1.0
4,359,111	+		GFF4358	0.84	-0.1
4,359,111	+		GFF4358	0.84	-1.2
4,359,111	+		GFF4358	0.84	+0.5
4,359,111	+		GFF4358	0.84	-0.9
4,359,114	-		GFF4358	0.84	-2.2
4,359,119	-		GFF4358	0.85	+0.9
4,359,119	-		GFF4358	0.85	-1.6
4,359,119	-		GFF4358	0.85	-1.6
4,359,119	-		GFF4358	0.85	+0.3
4,359,119	-		GFF4358	0.85	+0.9
4,359,119	-		GFF4358	0.85	+0.3
4,359,119	-		GFF4358	0.85	-1.9
4,359,119	-		GFF4358	0.85	+1.5
4,359,121	-		GFF4358	0.85	-0.6
4,359,121	-		GFF4358	0.85	-0.2
4,359,128	+		GFF4358	0.86	-0.1
4,359,136	-		GFF4358	0.87	+0.7
4,359,169	+				-1.5
4,359,186	+				-1.6
4,359,256	-				-2.4
4,359,267	+				-1.8
4,359,274	+				-0.8
4,359,282	-				-0.4
4,359,296	+				-0.5
4,359,298	+				-0.4
4,359,304	-				-1.8
4,359,305	-				-0.0
4,359,319	+				-1.1
4,359,319	+				-1.1
4,359,319	-				-0.6
4,359,319	-				-1.1
4,359,327	-				-1.3
4,359,327	-				-0.6
4,359,327	-				+0.1
4,359,329	+				+0.0
4,359,329	+				+0.3
4,359,350	+				-0.5
4,359,387	+				-0.3
4,359,395	-				+0.5
4,359,396	-				-3.2
4,359,399	+				-1.9
4,359,400	+				-0.1
4,359,401	-				+0.2
4,359,406	+				-1.1
4,359,418	+		GFF4359	0.10	-0.4
4,359,419	-		GFF4359	0.10	+1.2
4,359,457	+		GFF4359	0.13	-0.9
4,359,458	+		GFF4359	0.13	+0.3
4,359,477	+		GFF4359	0.14	-1.5
4,359,477	+		GFF4359	0.14	-1.5
4,359,477	+		GFF4359	0.14	-0.1
4,359,477	+		GFF4359	0.14	-1.6
4,359,477	+		GFF4359	0.14	+1.2
4,359,518	+		GFF4359	0.16	-0.5
4,359,518	+		GFF4359	0.16	-0.2
4,359,526	-		GFF4359	0.17	-0.8
4,359,527	+		GFF4359	0.17	-0.6
4,359,556	+		GFF4359	0.19	-0.1
4,359,558	+		GFF4359	0.19	-0.3
4,359,564	+		GFF4359	0.19	+0.3
4,359,568	+		GFF4359	0.19	-1.5
4,359,574	-		GFF4359	0.20	-0.7
4,359,574	-		GFF4359	0.20	-0.1
4,359,576	-		GFF4359	0.20	-0.5
4,359,593	+		GFF4359	0.21	-0.9
4,359,594	-		GFF4359	0.21	-0.5
4,359,594	-		GFF4359	0.21	+0.4
4,359,601	-		GFF4359	0.21	+0.8
4,359,601	-		GFF4359	0.21	+0.3
4,359,617	+		GFF4359	0.22	-0.0
4,359,622	+		GFF4359	0.23	-0.1
4,359,625	-		GFF4359	0.23	-0.1
4,359,626	+		GFF4359	0.23	-1.8
4,359,627	+		GFF4359	0.23	+1.4
4,359,634	+		GFF4359	0.23	+0.6
4,359,654	-		GFF4359	0.25	-1.5
4,359,659	+		GFF4359	0.25	-1.6
4,359,659	-		GFF4359	0.25	-2.8
4,359,664	+		GFF4359	0.25	+1.0
4,359,674	+		GFF4359	0.26	-0.2
4,359,740	+		GFF4359	0.30	-2.6
4,359,740	+		GFF4359	0.30	-0.3
4,359,740	+		GFF4359	0.30	-0.2
4,359,742	+		GFF4359	0.30	-1.6
4,359,748	-		GFF4359	0.30	-1.2
4,359,751	+		GFF4359	0.31	-2.0
4,359,761	+		GFF4359	0.31	+0.8
4,359,761	+		GFF4359	0.31	-1.5
4,359,761	+		GFF4359	0.31	+0.5
4,359,761	+		GFF4359	0.31	-1.1
4,359,761	+		GFF4359	0.31	-0.2
4,359,761	+		GFF4359	0.31	+0.4
4,359,761	+		GFF4359	0.31	-1.8
4,359,761	+		GFF4359	0.31	-0.0
4,359,761	+		GFF4359	0.31	-0.5
4,359,764	-		GFF4359	0.31	-1.1
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4,359,825	+		GFF4359	0.35	-1.9
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4,359,867	+		GFF4359	0.38	-1.5
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4,360,188	+		GFF4359	0.57	-1.9
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