Strain Fitness in Sphingobium sp. HT1-2 around GFF2894

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,953,035	+		GFF2892	0.11	+0.1
2,953,043	-		GFF2892	0.14	-0.5
2,953,043	-		GFF2892	0.14	+0.1
2,953,062	+		GFF2892	0.21	-0.1
2,953,062	+		GFF2892	0.21	-0.0
2,953,062	+		GFF2892	0.21	+0.1
2,953,062	+		GFF2892	0.21	-0.4
2,953,070	-		GFF2892	0.23	-2.3
2,953,163	+		GFF2892	0.55	-0.7
2,953,178	+		GFF2892	0.60	-0.7
2,953,178	+		GFF2892	0.60	+0.9
2,953,186	-		GFF2892	0.63	-1.7
2,953,186	-		GFF2892	0.63	-2.3
2,953,244	-		GFF2892	0.83	+1.4
2,953,298	+				-2.6
2,953,349	-				-2.2
2,953,369	-		GFF2893	0.11	-2.6
2,953,369	-		GFF2893	0.11	-3.1
2,953,396	+		GFF2893	0.14	-2.8
2,953,404	-		GFF2893	0.15	-2.7
2,953,418	-		GFF2893	0.17	-3.5
2,953,443	+		GFF2893	0.21	-1.2
2,953,463	-		GFF2893	0.24	-2.5
2,953,474	+		GFF2893	0.25	-3.1
2,953,474	+		GFF2893	0.25	-4.2
2,953,482	-		GFF2893	0.26	-2.0
2,953,486	-		GFF2893	0.27	-3.0
2,953,503	-		GFF2893	0.29	-1.2
2,953,534	+		GFF2893	0.33	-0.4
2,953,554	+		GFF2893	0.36	-3.7
2,953,575	+		GFF2893	0.39	-2.3
2,953,575	+		GFF2893	0.39	-3.1
2,953,575	+		GFF2893	0.39	-2.5
2,953,575	+		GFF2893	0.39	-2.5
2,953,583	-		GFF2893	0.40	-1.8
2,953,583	-		GFF2893	0.40	-1.0
2,953,629	+		GFF2893	0.47	-2.5
2,953,666	-		GFF2893	0.52	-2.3
2,953,690	+		GFF2893	0.55	-2.7
2,953,697	-		GFF2893	0.56	-2.2
2,953,703	-		GFF2893	0.57	-2.0
2,953,728	+		GFF2893	0.60	-1.6
2,953,731	-		GFF2893	0.61	-2.4
2,953,736	-		GFF2893	0.61	-3.9
2,953,757	+		GFF2893	0.64	-2.7
2,953,765	-		GFF2893	0.65	-0.6
2,953,765	-		GFF2893	0.65	-3.7
2,953,800	+		GFF2893	0.70	-2.3
2,953,822	+		GFF2893	0.73	-3.3
2,953,822	+		GFF2893	0.73	-2.8
2,953,830	-		GFF2893	0.74	-2.2
2,953,831	-		GFF2893	0.75	-3.0
2,953,832	+		GFF2893	0.75	-3.2
2,953,832	+		GFF2893	0.75	-1.9
2,953,832	+		GFF2893	0.75	-2.2
2,953,832	+		GFF2893	0.75	-2.7
2,953,832	+		GFF2893	0.75	-2.6
2,953,832	+		GFF2893	0.75	-3.1
2,953,835	-		GFF2893	0.75	-3.1
2,953,840	-		GFF2893	0.76	-1.7
2,953,840	-		GFF2893	0.76	-1.5
2,953,840	-		GFF2893	0.76	-2.7
2,953,840	-		GFF2893	0.76	-2.1
2,953,840	-		GFF2893	0.76	-1.2
2,953,840	-		GFF2893	0.76	-1.1
2,953,840	-		GFF2893	0.76	-1.4
2,953,840	-		GFF2893	0.76	-1.9
2,953,840	-		GFF2893	0.76	-1.5
2,953,840	-		GFF2893	0.76	-2.5
2,953,883	+		GFF2893	0.82	-3.6
2,953,884	+		GFF2893	0.82	-3.5
2,953,889	+		GFF2893	0.83	-2.3
2,953,891	-		GFF2893	0.83	-1.0
2,953,898	-		GFF2893	0.84	-2.3
2,953,898	-		GFF2893	0.84	-2.4
2,953,951	+				-2.2
2,953,951	+				-3.0
2,953,958	+				-2.5
2,953,959	-				-2.2
2,953,959	-				-2.5
2,953,959	-				-3.1
2,953,967	-				-1.1
2,953,977	-				-2.4
2,953,996	+				-3.8
2,954,012	-				-1.7
2,954,012	-				-2.9
2,954,016	+				-1.3
2,954,019	-				-2.5
2,954,019	-				-0.4
2,954,021	+				-1.1
2,954,021	+				-1.0
2,954,021	+				-2.4
2,954,021	+				-3.4
2,954,021	+				-1.9
2,954,021	+				-1.9
2,954,024	-				-0.4
2,954,024	-				+2.0
2,954,024	-				-1.5
2,954,024	-				-0.7
2,954,029	-				-0.5
2,954,029	-				+1.1
2,954,029	-				+0.4
2,954,029	-				+0.6
2,954,029	-				-2.0
2,954,029	-				-2.2
2,954,029	-				-0.3
2,954,031	+				-0.3
2,954,031	+				+0.2
2,954,031	+				-2.7
2,954,031	+				-1.2
2,954,031	+				-2.6
2,954,031	+				-1.2
2,954,034	-				-0.4
2,954,039	-				+0.8
2,954,039	-				-0.6
2,954,039	-				-0.5
2,954,039	-				+0.6
2,954,039	-				+1.1
2,954,039	-				-2.3
2,954,039	-				-0.1
2,954,039	-				-0.0
2,954,039	-				+0.1
2,954,039	-				+0.4
2,954,039	-				-0.1
2,954,039	-				-0.2
2,954,045	+				-1.1
2,954,045	+				-2.4
2,954,046	-				-2.2
2,954,053	-				-0.7
2,954,053	-				+0.4
2,954,053	-				-0.1
2,955,064	-				-0.0
2,955,100	-				-1.3
2,955,145	-				+0.5
2,955,167	-				-0.5
2,955,170	+				-0.5
2,955,175	+				+0.2
2,955,175	+				-1.0
2,955,178	-				+0.8
2,955,178	-				+0.1
2,955,178	-				+0.1
2,955,178	-				+1.2
2,955,183	-				+1.5
2,955,188	-				+0.6
2,955,273	+		GFF2895	0.10	-0.3
2,955,273	+		GFF2895	0.10	+1.0
2,955,273	+		GFF2895	0.10	+0.0
2,955,273	+		GFF2895	0.10	-2.4
2,955,333	+		GFF2895	0.13	+1.4
2,955,333	+		GFF2895	0.13	+0.8
2,955,333	+		GFF2895	0.13	-0.3
2,955,333	+		GFF2895	0.13	-0.3
2,955,348	+		GFF2895	0.14	-0.2
2,955,348	+		GFF2895	0.14	-0.5
2,955,356	-		GFF2895	0.14	-0.8
2,955,356	-		GFF2895	0.14	-0.6
2,955,356	-		GFF2895	0.14	-0.2
2,955,356	-		GFF2895	0.14	+0.7
2,955,410	+		GFF2895	0.17	-0.0
2,955,419	-		GFF2895	0.17	+0.4
2,955,450	+		GFF2895	0.18	+2.3
2,955,455	+		GFF2895	0.19	-1.2
2,955,534	+		GFF2895	0.22	+0.7
2,955,575	-		GFF2895	0.24	+2.2
2,955,575	-		GFF2895	0.24	-2.4
2,955,654	-		GFF2895	0.28	-1.9
2,955,664	-		GFF2895	0.28	+0.5
2,955,698	+		GFF2895	0.30	+2.2
2,955,698	+		GFF2895	0.30	-0.2
2,955,703	+		GFF2895	0.30	-0.3
2,955,706	-		GFF2895	0.30	-0.9
2,955,706	-		GFF2895	0.30	+0.8
2,955,706	-		GFF2895	0.30	-0.1
2,955,707	+		GFF2895	0.30	+0.0
2,955,711	-		GFF2895	0.30	+0.1
2,955,715	-		GFF2895	0.30	+0.8
2,955,716	-		GFF2895	0.30	-1.5
2,955,721	-		GFF2895	0.31	-0.4
2,955,721	-		GFF2895	0.31	+0.1
2,955,726	-		GFF2895	0.31	+0.9
2,955,809	+		GFF2895	0.35	-1.3
2,955,809	+		GFF2895	0.35	-0.6
2,955,809	+		GFF2895	0.35	-0.2
2,955,809	+		GFF2895	0.35	+1.1
2,955,809	+		GFF2895	0.35	+0.8
2,955,809	+		GFF2895	0.35	-0.6
2,955,809	+		GFF2895	0.35	+1.2
2,955,809	+		GFF2895	0.35	+0.1
2,955,812	-		GFF2895	0.35	-0.3
2,955,817	-		GFF2895	0.35	-1.0
2,955,817	-		GFF2895	0.35	+0.5
2,955,818	-		GFF2895	0.35	+0.5
2,955,839	-		GFF2895	0.36	+0.1
2,955,839	-		GFF2895	0.36	+0.8
2,955,851	+		GFF2895	0.36	+1.7
2,955,859	-		GFF2895	0.37	-1.6
2,955,860	-		GFF2895	0.37	+0.7
2,955,867	+		GFF2895	0.37	-0.5
2,955,874	-		GFF2895	0.37	-0.2
2,955,930	+		GFF2895	0.40	-1.0
2,955,960	-		GFF2895	0.41	+0.2
2,956,019	-		GFF2895	0.44	+0.3