Strain Fitness in Sphingobium sp. HT1-2 around GFF2639

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,659,068	-		GFF2638	0.41	+0.2
2,659,072	-		GFF2638	0.41	+0.3
2,659,080	-		GFF2638	0.42	-0.9
2,659,087	+		GFF2638	0.42	+1.1
2,659,107	+		GFF2638	0.43	+0.6
2,659,107	-		GFF2638	0.43	-1.0
2,659,121	+		GFF2638	0.44	-0.0
2,659,131	+		GFF2638	0.45	+1.1
2,659,131	+		GFF2638	0.45	-0.9
2,659,131	+		GFF2638	0.45	-0.9
2,659,139	-		GFF2638	0.46	-0.5
2,659,139	-		GFF2638	0.46	-0.3
2,659,141	+		GFF2638	0.46	+0.6
2,659,144	-		GFF2638	0.46	-0.6
2,659,144	-		GFF2638	0.46	+1.0
2,659,144	-		GFF2638	0.46	+0.6
2,659,152	-		GFF2638	0.46	-1.5
2,659,178	+		GFF2638	0.48	+0.2
2,659,178	+		GFF2638	0.48	+0.0
2,659,178	+		GFF2638	0.48	-0.6
2,659,178	+		GFF2638	0.48	+0.0
2,659,178	+		GFF2638	0.48	-2.0
2,659,186	-		GFF2638	0.49	+0.0
2,659,186	-		GFF2638	0.49	-0.3
2,659,186	-		GFF2638	0.49	+0.9
2,659,191	-		GFF2638	0.49	-0.3
2,659,195	+		GFF2638	0.49	+0.1
2,659,196	+		GFF2638	0.49	-1.0
2,659,197	+		GFF2638	0.49	+0.9
2,659,221	-		GFF2638	0.51	+0.5
2,659,247	+		GFF2638	0.53	-0.4
2,659,259	+		GFF2638	0.53	+0.1
2,659,276	-		GFF2638	0.55	-0.5
2,659,286	+		GFF2638	0.55	-1.0
2,659,330	+		GFF2638	0.58	+1.7
2,659,330	+		GFF2638	0.58	-0.2
2,659,330	+		GFF2638	0.58	-1.6
2,659,330	+		GFF2638	0.58	-2.5
2,659,330	+		GFF2638	0.58	-2.1
2,659,330	+		GFF2638	0.58	+0.3
2,659,330	+		GFF2638	0.58	-1.2
2,659,330	+		GFF2638	0.58	+0.7
2,659,330	+		GFF2638	0.58	+0.6
2,659,330	+		GFF2638	0.58	-0.9
2,659,330	+		GFF2638	0.58	-0.6
2,659,330	+		GFF2638	0.58	+0.6
2,659,330	+		GFF2638	0.58	-0.9
2,659,330	+		GFF2638	0.58	+0.3
2,659,330	+		GFF2638	0.58	+0.1
2,659,330	+		GFF2638	0.58	-0.1
2,659,330	+		GFF2638	0.58	-0.4
2,659,330	+		GFF2638	0.58	+1.0
2,659,330	+		GFF2638	0.58	-1.9
2,659,330	+		GFF2638	0.58	-0.3
2,659,330	+		GFF2638	0.58	-0.2
2,659,330	+		GFF2638	0.58	-0.1
2,659,330	+		GFF2638	0.58	-2.5
2,659,330	+		GFF2638	0.58	-0.0
2,659,330	+		GFF2638	0.58	-0.1
2,659,330	+		GFF2638	0.58	+0.7
2,659,330	+		GFF2638	0.58	-1.4
2,659,330	+		GFF2638	0.58	-1.4
2,659,330	+		GFF2638	0.58	+0.8
2,659,330	+		GFF2638	0.58	+0.1
2,659,330	+		GFF2638	0.58	+0.3
2,659,330	+		GFF2638	0.58	-0.7
2,659,330	+		GFF2638	0.58	+1.1
2,659,338	-		GFF2638	0.59	+0.3
2,659,338	-		GFF2638	0.59	-0.6
2,659,338	-		GFF2638	0.59	+0.4
2,659,338	-		GFF2638	0.59	-0.5
2,659,338	-		GFF2638	0.59	-0.9
2,659,338	-		GFF2638	0.59	-0.4
2,659,338	-		GFF2638	0.59	+0.0
2,659,338	-		GFF2638	0.59	+0.8
2,659,338	-		GFF2638	0.59	-1.2
2,659,338	-		GFF2638	0.59	-0.4
2,659,338	-		GFF2638	0.59	-1.3
2,659,338	-		GFF2638	0.59	-0.3
2,659,338	-		GFF2638	0.59	-0.1
2,659,338	-		GFF2638	0.59	+0.3
2,659,338	-		GFF2638	0.59	-2.1
2,659,338	-		GFF2638	0.59	+0.6
2,659,338	-		GFF2638	0.59	-0.9
2,659,338	-		GFF2638	0.59	-0.6
2,659,338	-		GFF2638	0.59	-1.2
2,659,338	-		GFF2638	0.59	-1.2
2,659,338	-		GFF2638	0.59	+0.3
2,659,338	-		GFF2638	0.59	-0.5
2,659,338	-		GFF2638	0.59	-0.2
2,659,338	-		GFF2638	0.59	-2.2
2,659,338	-		GFF2638	0.59	+0.6
2,659,338	-		GFF2638	0.59	-0.2
2,659,338	-		GFF2638	0.59	+1.1
2,659,338	-		GFF2638	0.59	+1.3
2,659,338	-		GFF2638	0.59	-1.5
2,659,338	-		GFF2638	0.59	-0.1
2,659,338	-		GFF2638	0.59	+1.4
2,659,338	-		GFF2638	0.59	-0.4
2,659,338	-		GFF2638	0.59	-1.2
2,659,338	-		GFF2638	0.59	+0.4
2,659,338	-		GFF2638	0.59	-0.2
2,659,338	-		GFF2638	0.59	-0.5
2,659,338	-		GFF2638	0.59	+0.0
2,659,379	+		GFF2638	0.61	-0.4
2,659,379	+		GFF2638	0.61	-0.1
2,659,379	+		GFF2638	0.61	+1.1
2,659,379	+		GFF2638	0.61	+1.1
2,659,379	+		GFF2638	0.61	-0.2
2,659,387	-		GFF2638	0.62	+0.6
2,659,387	-		GFF2638	0.62	+0.9
2,659,392	+		GFF2638	0.62	-1.2
2,659,409	-		GFF2638	0.63	-1.0
2,659,409	-		GFF2638	0.63	+0.4
2,659,422	+		GFF2638	0.64	-0.1
2,659,422	+		GFF2638	0.64	-0.0
2,659,422	+		GFF2638	0.64	-1.5
2,659,430	-		GFF2638	0.65	+0.5
2,659,430	-		GFF2638	0.65	-0.5
2,659,430	-		GFF2638	0.65	-2.1
2,659,468	-		GFF2638	0.67	+0.2
2,659,502	-		GFF2638	0.70	-1.1
2,659,504	+		GFF2638	0.70	+0.0
2,659,519	+		GFF2638	0.71	-0.8
2,659,519	+		GFF2638	0.71	-0.7
2,659,519	+		GFF2638	0.71	+1.5
2,659,527	-		GFF2638	0.71	+0.3
2,659,528	-		GFF2638	0.71	-0.4
2,659,553	+		GFF2638	0.73	-2.5
2,659,579	+		GFF2638	0.75	-0.2
2,659,587	-		GFF2638	0.75	-0.4
2,659,597	+		GFF2638	0.76	-2.2
2,659,597	+		GFF2638	0.76	-0.3
2,659,602	+		GFF2638	0.76	+0.5
2,659,602	+		GFF2638	0.76	-1.0
2,659,616	+		GFF2638	0.77	-0.5
2,659,616	+		GFF2638	0.77	-0.8
2,659,624	+		GFF2638	0.78	-2.2
2,659,624	+		GFF2638	0.78	-0.3
2,659,624	+		GFF2638	0.78	+0.2
2,659,624	+		GFF2638	0.78	-0.4
2,659,624	+		GFF2638	0.78	-0.0
2,659,624	+		GFF2638	0.78	-0.5
2,659,624	+		GFF2638	0.78	+0.5
2,659,632	-		GFF2638	0.78	+0.4
2,659,632	-		GFF2638	0.78	-0.9
2,659,632	-		GFF2638	0.78	+0.3
2,659,632	-		GFF2638	0.78	-1.8
2,659,632	-		GFF2638	0.78	-0.4
2,659,632	-		GFF2638	0.78	-0.6
2,659,667	-		GFF2638	0.80	-1.7
2,659,674	+		GFF2638	0.81	-1.4
2,659,687	+		GFF2638	0.82	-0.7
2,659,696	-		GFF2638	0.82	+1.0
2,659,712	+		GFF2638	0.83	+0.4
2,659,712	+		GFF2638	0.83	+1.2
2,659,712	+		GFF2638	0.83	+0.3
2,659,712	+		GFF2638	0.83	-1.4
2,659,712	+		GFF2638	0.83	-0.7
2,659,712	+		GFF2638	0.83	-0.1
2,659,712	+		GFF2638	0.83	-0.4
2,659,712	+		GFF2638	0.83	-0.2
2,659,712	+		GFF2638	0.83	-2.9
2,659,712	+		GFF2638	0.83	-1.2
2,659,712	+		GFF2638	0.83	-0.8
2,659,712	+		GFF2638	0.83	-3.0
2,659,720	-		GFF2638	0.84	-0.5
2,659,720	-		GFF2638	0.84	-1.4
2,659,720	-		GFF2638	0.84	-0.8
2,659,720	-		GFF2638	0.84	-1.9
2,659,720	-		GFF2638	0.84	+1.1
2,659,720	-		GFF2638	0.84	+0.1
2,659,720	-		GFF2638	0.84	-1.1
2,659,722	+		GFF2638	0.84	-0.2
2,659,728	+		GFF2638	0.84	-0.7
2,659,728	+		GFF2638	0.84	-0.4
2,659,741	-		GFF2638	0.85	+0.6
2,659,746	-		GFF2638	0.86	+0.0
2,659,751	+		GFF2638	0.86	+1.3
2,659,764	+		GFF2638	0.87	+0.2
2,659,772	-		GFF2638	0.87	-0.4
2,659,772	-		GFF2638	0.87	-0.4
2,659,772	-		GFF2638	0.87	-0.0
2,659,786	+		GFF2638	0.88	-0.2
2,659,786	+		GFF2638	0.88	+0.6
2,659,791	+		GFF2638	0.89	-2.2
2,659,794	-		GFF2638	0.89	+0.4
2,659,795	-		GFF2638	0.89	+0.4
2,659,799	-		GFF2638	0.89	+0.9
2,659,808	+		GFF2638	0.90	+0.1
2,659,810	+		GFF2638	0.90	+0.4
2,659,834	+				-0.3
2,659,861	+				-0.0
2,659,897	-				+0.3
2,659,903	-				+0.3
2,659,903	-				-2.1
2,659,908	+				-1.9
2,659,945	-				-0.1
2,659,951	-				-0.3
2,659,961	-				-1.8
2,660,039	+				+0.7
2,660,044	+				-1.2
2,660,044	+				-1.2
2,660,044	+				+0.4
2,660,044	+				-0.4
2,660,044	+				-2.3
2,660,044	+				+1.7
2,660,044	+				-0.0
2,660,044	+				+0.1
2,660,047	-				-0.4
2,660,049	+				-1.4
2,660,052	-				-0.6
2,660,052	-				-0.2
2,660,059	+		GFF2639	0.11	-0.2
2,660,066	-		GFF2639	0.14	-1.4
2,660,082	+		GFF2639	0.20	+0.1
2,660,090	-		GFF2639	0.24	+0.2
2,660,090	-		GFF2639	0.24	-2.0
2,660,090	-		GFF2639	0.24	-0.7
2,660,090	-		GFF2639	0.24	-1.3
2,660,090	-		GFF2639	0.24	-0.6
2,660,090	-		GFF2639	0.24	-1.2
2,660,090	-		GFF2639	0.24	+1.0
2,660,116	+		GFF2639	0.34	+0.1
2,660,124	-		GFF2639	0.37	+0.0
2,660,129	-		GFF2639	0.39	-0.9
2,660,129	-		GFF2639	0.39	+1.3
2,660,140	+		GFF2639	0.44	-1.2
2,660,238	-		GFF2639	0.84	+0.0
2,660,280	+				+1.0
2,660,297	+				-0.5
2,660,297	+				-1.2
2,660,316	-		GFF2640	0.14	-0.3
2,660,339	+		GFF2640	0.22	-0.2
2,660,339	+		GFF2640	0.22	-1.1
2,660,339	+		GFF2640	0.22	+0.1
2,660,339	+		GFF2640	0.22	-0.2
2,660,347	-		GFF2640	0.25	-0.7
2,660,347	-		GFF2640	0.25	-1.6
2,660,347	-		GFF2640	0.25	-1.8
2,660,365	-		GFF2640	0.31	-0.2
2,660,391	-		GFF2640	0.39	+0.4
2,660,415	+		GFF2640	0.47	+0.1
2,660,434	-		GFF2640	0.54	-0.3
2,660,434	-		GFF2640	0.54	+0.4
2,660,435	-		GFF2640	0.54	-0.5
2,660,435	-		GFF2640	0.54	-1.7
2,660,437	+		GFF2640	0.55	-0.2
2,660,442	+		GFF2640	0.57	-0.5
2,660,445	-		GFF2640	0.58	-0.6
2,660,445	-		GFF2640	0.58	-0.0
2,660,447	+		GFF2640	0.58	-0.7
2,660,483	+		GFF2640	0.70	-0.5
2,660,492	+		GFF2640	0.73	-0.7
2,660,553	-				-0.7
2,660,553	-				-0.9
2,660,558	-				+0.7
2,660,572	-				-0.4
2,660,579	-				+0.1
2,660,579	-				-0.1
2,660,579	-				+1.6
2,660,583	+				+1.7
2,660,590	-				-1.1
2,660,626	-				+0.3
2,660,665	+				-0.7
2,660,665	+				+0.7
2,660,673	-				-1.0
2,660,691	-				-0.2
2,660,711	+				-0.5
2,660,738	-				-0.5
2,660,751	+				-0.7
2,660,757	+				-1.4
2,660,757	+				-1.5
2,660,757	+				-0.8
2,660,759	-				-1.3
2,660,765	-				+1.4
2,660,765	-				-0.1
2,660,765	-				-1.2
2,660,801	+		GFF2641	0.11	+0.4
2,660,805	+		GFF2641	0.11	+0.2
2,660,810	-		GFF2641	0.11	-0.7
2,660,811	-		GFF2641	0.11	-2.3
2,660,814	+		GFF2641	0.12	-0.1
2,660,823	+		GFF2641	0.12	+1.8
2,660,828	+		GFF2641	0.13	-1.2
2,660,828	+		GFF2641	0.13	+0.8
2,660,828	+		GFF2641	0.13	-0.7
2,660,828	+		GFF2641	0.13	-1.0
2,660,828	+		GFF2641	0.13	-0.0
2,660,828	+		GFF2641	0.13	+1.2
2,660,836	-		GFF2641	0.13	+0.2
2,660,836	-		GFF2641	0.13	+1.4
2,660,836	-		GFF2641	0.13	-0.7
2,660,836	-		GFF2641	0.13	-0.3
2,660,836	-		GFF2641	0.13	-0.7
2,660,836	-		GFF2641	0.13	-0.7
2,660,844	-		GFF2641	0.14	-0.0
2,660,866	+		GFF2641	0.15	+1.0
2,660,868	+		GFF2641	0.16	-0.2
2,660,868	+		GFF2641	0.16	-0.1
2,660,868	+		GFF2641	0.16	-1.5
2,660,868	+		GFF2641	0.16	-1.2
2,660,876	-		GFF2641	0.16	+1.1
2,660,876	-		GFF2641	0.16	-1.6
2,660,876	-		GFF2641	0.16	+1.4
2,660,889	+		GFF2641	0.17	+0.3
2,660,921	-		GFF2641	0.19	+0.1
2,660,939	-		GFF2641	0.21	-0.9
2,660,948	+		GFF2641	0.21	-1.4
2,660,983	-		GFF2641	0.24	-2.0
2,660,983	-		GFF2641	0.24	-2.1
2,660,991	-		GFF2641	0.25	+1.2
2,660,998	+		GFF2641	0.25	+0.5
2,661,012	+		GFF2641	0.26	-0.2
2,661,012	+		GFF2641	0.26	+0.2
2,661,020	-		GFF2641	0.27	-1.4
2,661,020	-		GFF2641	0.27	-0.4
2,661,022	+		GFF2641	0.27	+0.4
2,661,025	-		GFF2641	0.27	-2.0
2,661,025	-		GFF2641	0.27	-2.1
2,661,027	+		GFF2641	0.27	+1.0
2,661,027	-		GFF2641	0.27	-2.0
2,661,030	-		GFF2641	0.27	-2.7
2,661,031	+		GFF2641	0.27	+0.7
2,661,031	+		GFF2641	0.27	-0.3
2,661,039	+		GFF2641	0.28	-0.2
2,661,039	-		GFF2641	0.28	+0.1
2,661,044	+		GFF2641	0.28	-0.1
2,661,052	+		GFF2641	0.29	-0.3
2,661,060	-		GFF2641	0.30	-0.7
2,661,065	-		GFF2641	0.30	+0.2
2,661,075	+		GFF2641	0.31	+0.1
2,661,076	+		GFF2641	0.31	-0.5
2,661,076	+		GFF2641	0.31	-1.0
2,661,076	+		GFF2641	0.31	-1.4
2,661,076	+		GFF2641	0.31	+0.9
2,661,084	-		GFF2641	0.31	+0.6
2,661,084	-		GFF2641	0.31	+0.4
2,661,084	-		GFF2641	0.31	-1.2
2,661,091	+		GFF2641	0.32	-1.0
2,661,096	+		GFF2641	0.32	+0.0
2,661,099	-		GFF2641	0.32	-1.0
2,661,103	+		GFF2641	0.33	+0.2
2,661,122	-		GFF2641	0.34	-0.0
2,661,125	+		GFF2641	0.34	-0.2
2,661,129	+		GFF2641	0.35	-1.4
2,661,133	-		GFF2641	0.35	-1.3
2,661,143	+		GFF2641	0.36	-1.0
2,661,168	+		GFF2641	0.37	+0.6
2,661,168	+		GFF2641	0.37	-1.6
2,661,183	+		GFF2641	0.38	+1.3
2,661,183	+		GFF2641	0.38	-1.3
2,661,191	+		GFF2641	0.39	-2.4
2,661,191	-		GFF2641	0.39	-0.3
2,661,191	-		GFF2641	0.39	-1.6
2,661,192	-		GFF2641	0.39	-1.0
2,661,195	-		GFF2641	0.39	+0.1
2,661,211	-		GFF2641	0.41	-1.0
2,661,213	+		GFF2641	0.41	-0.8
2,661,213	+		GFF2641	0.41	+1.4
2,661,213	+		GFF2641	0.41	+0.1
2,661,213	+		GFF2641	0.41	-0.2
2,661,213	+		GFF2641	0.41	+1.3
2,661,213	+		GFF2641	0.41	-2.2
2,661,213	+		GFF2641	0.41	+0.7
2,661,221	-		GFF2641	0.41	-1.4
2,661,221	-		GFF2641	0.41	-1.3
2,661,221	-		GFF2641	0.41	+2.3
2,661,247	+		GFF2641	0.43	-1.2
2,661,247	+		GFF2641	0.43	-0.7
2,661,247	+		GFF2641	0.43	+0.7
2,661,247	+		GFF2641	0.43	-1.9
2,661,247	+		GFF2641	0.43	-0.5
2,661,247	+		GFF2641	0.43	-0.7
2,661,247	+		GFF2641	0.43	-1.3
2,661,247	+		GFF2641	0.43	-1.0
2,661,247	+		GFF2641	0.43	-0.2
2,661,247	+		GFF2641	0.43	-0.2
2,661,254	+		GFF2641	0.44	-1.5
2,661,255	-		GFF2641	0.44	+0.4
2,661,255	-		GFF2641	0.44	+0.1
2,661,255	-		GFF2641	0.44	-0.0
2,661,255	-		GFF2641	0.44	+0.0
2,661,255	-		GFF2641	0.44	-2.1
2,661,265	+		GFF2641	0.44	-1.2
2,661,271	+		GFF2641	0.45	-0.7
2,661,271	+		GFF2641	0.45	-0.3