Strain Fitness in Sphingobium sp. HT1-2 around GFF2503

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,526,027	-				-1.3
2,526,053	+				-0.6
2,526,060	+				-0.0
2,526,060	+				-1.2
2,526,060	+				+0.3
2,526,062	+				-2.5
2,526,062	+				-0.0
2,526,068	-				+0.7
2,526,068	-				-0.1
2,526,091	+				-0.3
2,526,099	-				-0.5
2,526,101	+				+0.4
2,526,101	+				+0.1
2,526,104	-				+0.5
2,526,109	-				-0.9
2,526,113	+				-1.6
2,526,119	-				-0.4
2,526,121	-				-0.6
2,526,121	-				-0.6
2,526,128	+				-0.6
2,526,131	-				+1.3
2,526,133	+				-0.0
2,526,141	-		GFF2502	0.11	+0.3
2,526,148	-		GFF2502	0.12	+0.1
2,526,148	-		GFF2502	0.12	+0.4
2,526,161	+		GFF2502	0.14	+0.2
2,526,174	+		GFF2502	0.15	-0.0
2,526,193	+		GFF2502	0.18	-0.4
2,526,201	-		GFF2502	0.19	-0.2
2,526,201	-		GFF2502	0.19	+0.3
2,526,236	+		GFF2502	0.24	-0.1
2,526,269	+		GFF2502	0.29	+0.1
2,526,271	+		GFF2502	0.29	-1.0
2,526,277	-		GFF2502	0.30	-0.5
2,526,277	-		GFF2502	0.30	-0.6
2,526,279	+		GFF2502	0.30	+1.7
2,526,279	-		GFF2502	0.30	-0.5
2,526,279	-		GFF2502	0.30	+0.6
2,526,290	+		GFF2502	0.32	-1.9
2,526,307	+		GFF2502	0.34	+0.0
2,526,352	+		GFF2502	0.41	-0.2
2,526,403	-		GFF2502	0.48	+0.7
2,526,416	-		GFF2502	0.50	-1.5
2,526,418	+		GFF2502	0.50	+0.0
2,526,418	+		GFF2502	0.50	-2.2
2,526,418	+		GFF2502	0.50	-0.4
2,526,418	+		GFF2502	0.50	+0.2
2,526,426	-		GFF2502	0.51	+0.3
2,526,426	-		GFF2502	0.51	-0.2
2,526,426	-		GFF2502	0.51	-0.0
2,526,426	-		GFF2502	0.51	+2.0
2,526,426	-		GFF2502	0.51	+0.5
2,526,426	-		GFF2502	0.51	+0.5
2,526,464	+		GFF2502	0.56	-0.0
2,526,472	-		GFF2502	0.57	+0.6
2,526,487	+		GFF2502	0.59	-1.9
2,526,492	+		GFF2502	0.60	+0.9
2,526,492	+		GFF2502	0.60	-0.6
2,526,492	+		GFF2502	0.60	-0.5
2,526,515	+		GFF2502	0.63	-0.8
2,526,523	-		GFF2502	0.65	-0.6
2,526,525	+		GFF2502	0.65	-3.0
2,526,525	+		GFF2502	0.65	+1.5
2,526,533	-		GFF2502	0.66	+0.4
2,526,535	+		GFF2502	0.66	+0.0
2,526,535	+		GFF2502	0.66	+0.1
2,526,543	-		GFF2502	0.67	-0.9
2,526,567	-		GFF2502	0.71	-1.0
2,526,568	+		GFF2502	0.71	-1.0
2,526,582	+		GFF2502	0.73	+0.3
2,526,582	+		GFF2502	0.73	+0.7
2,526,585	-		GFF2502	0.73	-1.2
2,526,596	+		GFF2502	0.75	+1.5
2,526,596	+		GFF2502	0.75	-0.2
2,526,596	+		GFF2502	0.75	-0.2
2,526,596	+		GFF2502	0.75	+1.3
2,526,612	+		GFF2502	0.77	-0.9
2,526,630	-		GFF2502	0.80	+0.9
2,526,635	-		GFF2502	0.80	-0.2
2,526,644	-		GFF2502	0.82	+0.3
2,526,651	-		GFF2502	0.83	+0.8
2,526,688	-		GFF2502	0.88	-0.4
2,526,695	-		GFF2502	0.89	-0.8
2,526,695	-		GFF2502	0.89	-0.4
2,526,695	-		GFF2502	0.89	-0.4
2,526,710	-				-1.2
2,526,730	-				+0.3
2,526,742	+				-1.8
2,526,765	-				+0.5
2,526,765	-				+1.3
2,526,773	-				+0.4
2,526,778	-				+0.4
2,526,778	-				-1.0
2,526,780	+				+0.8
2,526,785	+				+0.3
2,526,785	+				+0.1
2,526,785	+				-0.5
2,526,788	-				-0.2
2,526,788	-				+1.1
2,526,788	-				-0.2
2,526,788	-				-1.4
2,526,793	-				-0.5
2,526,793	-				+0.4
2,526,793	-				-1.8
2,526,793	-				-0.6
2,526,793	-				-1.2
2,526,793	-				+0.4
2,526,795	+				+0.0
2,526,795	+				+0.6
2,526,803	-				-0.6
2,526,804	+				-1.6
2,526,809	+				+0.5
2,526,812	-				+0.6
2,526,812	-				+1.1
2,526,817	-				-0.4
2,526,825	+				+0.5
2,526,829	-				-0.5
2,526,831	-				+0.3
2,526,873	+				-0.5
2,526,900	+				-0.4
2,526,905	+				+0.9
2,526,913	-				-0.1
2,526,932	+				-0.4
2,526,940	-				-0.4
2,526,940	-				+1.1
2,526,940	-				-0.2
2,526,942	+				-2.3
2,526,942	+				-1.4
2,526,951	+				+0.4
2,526,951	+				+0.2
2,526,951	+				+1.3
2,526,951	+				-1.0
2,526,959	-				-0.6
2,526,994	+				-0.3
2,526,996	+				-0.3
2,527,004	-				-0.2
2,527,088	+		GFF2503	0.14	+1.3
2,527,138	+		GFF2503	0.20	+0.8
2,527,138	+		GFF2503	0.20	-0.2
2,527,138	+		GFF2503	0.20	-1.5
2,527,138	+		GFF2503	0.20	-1.9
2,527,138	+		GFF2503	0.20	-0.9
2,527,138	+		GFF2503	0.20	-0.9
2,527,138	+		GFF2503	0.20	-1.3
2,527,138	+		GFF2503	0.20	+0.5
2,527,138	+		GFF2503	0.20	+0.7
2,527,138	+		GFF2503	0.20	-2.0
2,527,143	+		GFF2503	0.21	-0.8
2,527,143	+		GFF2503	0.21	-0.2
2,527,146	-		GFF2503	0.21	+0.9
2,527,146	-		GFF2503	0.21	-0.4
2,527,146	-		GFF2503	0.21	-0.4
2,527,146	-		GFF2503	0.21	+0.2
2,527,146	-		GFF2503	0.21	+0.4
2,527,146	-		GFF2503	0.21	+0.3
2,527,146	-		GFF2503	0.21	-1.7
2,527,146	-		GFF2503	0.21	-0.1
2,527,146	-		GFF2503	0.21	+0.3
2,527,146	-		GFF2503	0.21	-0.2
2,527,155	-		GFF2503	0.22	-0.6
2,527,155	-		GFF2503	0.22	+1.0
2,527,198	+		GFF2503	0.27	+0.9
2,527,201	-		GFF2503	0.28	-0.4
2,527,206	-		GFF2503	0.28	+0.2
2,527,206	-		GFF2503	0.28	+0.9
2,527,226	+		GFF2503	0.31	-0.3
2,527,226	+		GFF2503	0.31	+1.0
2,527,226	+		GFF2503	0.31	+0.8
2,527,226	+		GFF2503	0.31	-1.6
2,527,226	+		GFF2503	0.31	+0.6
2,527,226	+		GFF2503	0.31	+0.3
2,527,226	+		GFF2503	0.31	+0.1
2,527,226	+		GFF2503	0.31	+0.1
2,527,229	-		GFF2503	0.31	-0.8
2,527,229	-		GFF2503	0.31	-1.4
2,527,234	-		GFF2503	0.32	-0.0
2,527,234	-		GFF2503	0.32	+0.2
2,527,234	-		GFF2503	0.32	-0.7
2,527,234	-		GFF2503	0.32	+1.8
2,527,234	-		GFF2503	0.32	-1.6
2,527,234	-		GFF2503	0.32	-0.5
2,527,234	-		GFF2503	0.32	-0.6
2,527,237	+		GFF2503	0.32	-0.8
2,527,237	+		GFF2503	0.32	+0.1
2,527,237	+		GFF2503	0.32	+0.3
2,527,237	+		GFF2503	0.32	+0.2
2,527,245	-		GFF2503	0.33	-0.9
2,527,245	-		GFF2503	0.33	+1.0
2,527,245	-		GFF2503	0.33	-2.0
2,527,245	-		GFF2503	0.33	-0.7
2,527,245	-		GFF2503	0.33	-0.6
2,527,246	+		GFF2503	0.33	-0.1
2,527,248	+		GFF2503	0.33	-0.8
2,527,255	-		GFF2503	0.34	-1.2
2,527,256	+		GFF2503	0.34	-1.5
2,527,256	+		GFF2503	0.34	+0.5
2,527,261	+		GFF2503	0.35	-0.3
2,527,261	+		GFF2503	0.35	+0.1
2,527,261	+		GFF2503	0.35	+0.3
2,527,261	+		GFF2503	0.35	+0.9
2,527,262	-		GFF2503	0.35	+0.2
2,527,266	+		GFF2503	0.35	-0.5
2,527,277	-		GFF2503	0.37	-2.1
2,527,281	+		GFF2503	0.37	-0.3
2,527,314	+		GFF2503	0.41	+0.5
2,527,322	-		GFF2503	0.42	-0.1
2,527,326	+		GFF2503	0.42	-1.0
2,527,338	+		GFF2503	0.44	+0.4
2,527,346	-		GFF2503	0.45	-1.4
2,527,349	-		GFF2503	0.45	+0.2
2,527,360	+		GFF2503	0.47	-0.3
2,527,373	+		GFF2503	0.48	-0.0
2,527,373	+		GFF2503	0.48	+0.2
2,527,374	-		GFF2503	0.48	+0.3
2,527,381	-		GFF2503	0.49	-0.3
2,527,381	-		GFF2503	0.49	-1.9
2,527,388	+		GFF2503	0.50	-0.9
2,527,388	+		GFF2503	0.50	+0.9
2,527,388	+		GFF2503	0.50	-0.1
2,527,388	+		GFF2503	0.50	-0.9
2,527,388	+		GFF2503	0.50	-0.5
2,527,388	+		GFF2503	0.50	+1.0
2,527,388	+		GFF2503	0.50	-0.9
2,527,388	+		GFF2503	0.50	+0.8
2,527,388	+		GFF2503	0.50	-0.1
2,527,388	+		GFF2503	0.50	-0.6
2,527,388	+		GFF2503	0.50	-0.4
2,527,394	+		GFF2503	0.51	-2.2
2,527,394	+		GFF2503	0.51	+0.0
2,527,394	+		GFF2503	0.51	+0.5
2,527,395	+		GFF2503	0.51	-1.3
2,527,395	+		GFF2503	0.51	-1.7
2,527,395	+		GFF2503	0.51	-0.7
2,527,395	+		GFF2503	0.51	+1.3
2,527,396	-		GFF2503	0.51	-1.2
2,527,396	-		GFF2503	0.51	-0.5
2,527,396	-		GFF2503	0.51	-1.2
2,527,396	-		GFF2503	0.51	-0.2
2,527,396	-		GFF2503	0.51	-2.5
2,527,402	-		GFF2503	0.51	-1.4
2,527,402	-		GFF2503	0.51	-1.0
2,527,402	-		GFF2503	0.51	+0.5
2,527,402	-		GFF2503	0.51	-1.3
2,527,402	-		GFF2503	0.51	-2.2
2,527,403	-		GFF2503	0.52	+1.0
2,527,403	-		GFF2503	0.52	-0.4
2,527,403	-		GFF2503	0.52	-0.2
2,527,404	+		GFF2503	0.52	+2.0
2,527,412	-		GFF2503	0.53	+0.3
2,527,417	-		GFF2503	0.53	+1.7
2,527,418	+		GFF2503	0.53	+0.8
2,527,423	+		GFF2503	0.54	+0.0
2,527,423	+		GFF2503	0.54	-1.8
2,527,423	+		GFF2503	0.54	-2.2
2,527,428	+		GFF2503	0.55	-0.6
2,527,429	+		GFF2503	0.55	-1.8
2,527,431	-		GFF2503	0.55	-0.6
2,527,431	-		GFF2503	0.55	-1.0
2,527,431	-		GFF2503	0.55	+0.4
2,527,433	+		GFF2503	0.55	-1.0
2,527,468	+		GFF2503	0.59	+0.3
2,527,472	+		GFF2503	0.60	+0.0
2,527,480	-		GFF2503	0.61	-0.7
2,527,486	+		GFF2503	0.61	+0.1
2,527,489	-		GFF2503	0.62	-0.3
2,527,501	-		GFF2503	0.63	-1.4
2,527,501	-		GFF2503	0.63	+1.3
2,527,516	-		GFF2503	0.65	-2.1
2,527,517	-		GFF2503	0.65	+0.6
2,527,526	+		GFF2503	0.66	+0.2
2,527,526	+		GFF2503	0.66	+0.1
2,527,533	+		GFF2503	0.67	-0.6
2,527,533	+		GFF2503	0.67	+0.1
2,527,534	-		GFF2503	0.67	-1.1
2,527,541	-		GFF2503	0.68	+0.3
2,527,541	-		GFF2503	0.68	-0.2
2,527,543	+		GFF2503	0.68	+0.4
2,527,551	-		GFF2503	0.69	-1.0
2,527,551	-		GFF2503	0.69	+1.5
2,527,552	-		GFF2503	0.69	-0.6
2,527,574	+		GFF2503	0.72	-1.8
2,527,588	+		GFF2503	0.74	-0.9
2,527,588	+		GFF2503	0.74	+0.1
2,527,588	+		GFF2503	0.74	-0.2
2,527,594	+		GFF2503	0.74	-0.5
2,527,596	-		GFF2503	0.74	-0.6
2,527,596	-		GFF2503	0.74	+1.2
2,527,596	-		GFF2503	0.74	-1.5
2,527,629	+		GFF2503	0.78	-1.6
2,527,636	-		GFF2503	0.79	-2.6
2,527,639	+		GFF2503	0.80	+0.1
2,527,639	+		GFF2503	0.80	-0.9
2,527,639	+		GFF2503	0.80	+0.1
2,527,643	+		GFF2503	0.80	-0.7
2,527,643	+		GFF2503	0.80	+0.2
2,527,644	+		GFF2503	0.80	-0.3
2,527,644	+		GFF2503	0.80	+0.2
2,527,688	-		GFF2503	0.85	+0.4
2,527,717	+		GFF2503	0.89	+0.0
2,527,717	+		GFF2503	0.89	-2.0
2,527,718	+		GFF2503	0.89	-0.3
2,527,727	+				-1.0
2,527,735	-				+0.2
2,527,735	-				-0.1
2,527,735	-				-2.5
2,527,735	-				-1.0
2,527,735	-				+0.5
2,527,740	+				+0.4
2,527,740	+				-0.7
2,527,757	+				-0.0
2,527,772	+				-0.5
2,527,773	+				+1.2
2,527,891	+				+0.2
2,527,904	+				-0.6
2,527,907	-				-1.1
2,527,917	-				-1.1
2,527,917	-				-0.6
2,527,917	-				+0.5
2,527,933	+				-0.8
2,527,940	-				+0.5
2,527,945	+				+0.6
2,527,956	+				+0.9
2,527,961	-				-0.6
2,527,963	-				-0.1
2,527,971	+				+0.3
2,527,971	+				-0.9
2,527,971	+				+0.1
2,527,979	-				-0.5
2,527,979	-				-1.5
2,527,979	-				+0.6
2,528,001	-				-1.3
2,528,094	+				+0.2
2,528,094	-				+0.6
2,528,105	+				-0.4
2,528,133	+				-0.3
2,528,133	+				-0.2
2,528,143	+				+0.1
2,528,143	+				-0.2
2,528,146	-				+0.8
2,528,151	-				-0.4
2,528,151	-				-0.1
2,528,151	-				-1.1
2,528,151	-				+0.8
2,528,191	+				-0.3
2,528,204	+				-1.9
2,528,204	+				-1.5
2,528,204	+				-1.2
2,528,204	+				-2.6
2,528,204	+				-0.6
2,528,204	+				+0.5
2,528,204	+				+0.5
2,528,204	+				+0.6
2,528,209	+				+0.8
2,528,211	-				-0.3
2,528,212	-				+0.7
2,528,212	-				+1.0
2,528,212	-				-1.2
2,528,212	-				-0.2
2,528,212	-				-1.2
2,528,212	-				-2.0
2,528,212	-				-0.8
2,528,212	-				+1.5
2,528,212	-				-1.3
2,528,232	+				+0.4
2,528,232	+				-0.3
2,528,284	+		GFF2504	0.12	-0.8
2,528,285	-		GFF2504	0.12	-1.2
2,528,290	-		GFF2504	0.13	+0.1
2,528,291	-		GFF2504	0.13	-0.5
2,528,293	+		GFF2504	0.13	+0.1
2,528,293	+		GFF2504	0.13	-0.2
2,528,293	+		GFF2504	0.13	-1.8
2,528,301	-		GFF2504	0.13	+0.1
2,528,301	-		GFF2504	0.13	-1.3
2,528,301	-		GFF2504	0.13	-0.5
2,528,301	-		GFF2504	0.13	-0.6
2,528,301	-		GFF2504	0.13	-0.6
2,528,310	+		GFF2504	0.14	-0.9
2,528,311	-		GFF2504	0.14	+0.1
2,528,318	-		GFF2504	0.14	+0.6
2,528,320	+		GFF2504	0.15	-0.7
2,528,320	+		GFF2504	0.15	-1.3
2,528,323	-		GFF2504	0.15	-0.4
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