Strain Fitness in Sphingobium sp. HT1-2 around GFF2457

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,477,537	+		GFF2455	0.51	-0.5
2,477,542	+		GFF2455	0.52	-1.1
2,477,547	+		GFF2455	0.52	+1.0
2,477,547	+		GFF2455	0.52	-0.5
2,477,547	+		GFF2455	0.52	-0.9
2,477,547	+		GFF2455	0.52	-2.2
2,477,547	+		GFF2455	0.52	-0.0
2,477,547	+		GFF2455	0.52	+0.4
2,477,547	+		GFF2455	0.52	+1.0
2,477,547	+		GFF2455	0.52	-0.1
2,477,547	+		GFF2455	0.52	+1.8
2,477,547	+		GFF2455	0.52	-0.1
2,477,547	+		GFF2455	0.52	+0.2
2,477,555	-		GFF2455	0.53	+1.0
2,477,555	-		GFF2455	0.53	-0.5
2,477,555	-		GFF2455	0.53	+0.0
2,477,555	-		GFF2455	0.53	-0.3
2,477,555	-		GFF2455	0.53	+1.4
2,477,555	-		GFF2455	0.53	-0.8
2,477,555	-		GFF2455	0.53	-0.1
2,477,565	+		GFF2455	0.54	+0.8
2,477,579	+		GFF2455	0.55	+0.4
2,477,584	+		GFF2455	0.55	-1.8
2,477,584	+		GFF2455	0.55	+1.2
2,477,584	+		GFF2455	0.55	-2.5
2,477,584	+		GFF2455	0.55	+0.7
2,477,589	+		GFF2455	0.56	+1.0
2,477,592	-		GFF2455	0.56	-1.7
2,477,602	-		GFF2455	0.57	+0.2
2,477,610	+		GFF2455	0.58	-0.4
2,477,621	+		GFF2455	0.59	+0.9
2,477,621	+		GFF2455	0.59	+0.7
2,477,629	-		GFF2455	0.60	-0.2
2,477,629	-		GFF2455	0.60	+0.5
2,477,640	+		GFF2455	0.61	-0.5
2,477,656	-		GFF2455	0.62	+0.6
2,477,660	+		GFF2455	0.62	+0.4
2,477,667	-		GFF2455	0.63	+0.3
2,477,702	+		GFF2455	0.66	+1.2
2,477,722	+		GFF2455	0.68	+0.8
2,477,743	+		GFF2455	0.70	+1.2
2,477,744	+		GFF2455	0.70	-0.2
2,477,751	-		GFF2455	0.71	+0.7
2,477,751	-		GFF2455	0.71	-0.0
2,477,757	-		GFF2455	0.71	+0.2
2,477,780	+		GFF2455	0.73	+0.3
2,477,782	+		GFF2455	0.73	-0.3
2,477,784	-		GFF2455	0.74	+1.0
2,477,790	+		GFF2455	0.74	+1.4
2,477,828	-		GFF2455	0.78	+0.6
2,477,828	-		GFF2455	0.78	-0.2
2,477,828	-		GFF2455	0.78	-1.0
2,477,837	-		GFF2455	0.78	-0.1
2,477,857	+		GFF2455	0.80	-1.6
2,477,869	-		GFF2455	0.81	+0.2
2,477,874	-		GFF2455	0.82	-2.1
2,477,897	+		GFF2455	0.84	+1.5
2,477,897	+		GFF2455	0.84	+0.4
2,477,907	+		GFF2455	0.85	-0.3
2,477,922	-		GFF2455	0.86	-0.9
2,477,944	-		GFF2455	0.88	-1.3
2,477,984	+				+0.2
2,477,996	+				-0.1
2,478,001	+				+1.6
2,478,006	+				-1.0
2,478,006	+				+0.3
2,478,006	+				-0.6
2,478,006	+				-1.2
2,478,006	+				-0.5
2,478,006	+				-0.2
2,478,006	+				-0.6
2,478,006	+				+0.0
2,478,006	+				-0.5
2,478,006	+				+0.7
2,478,006	+				+0.1
2,478,006	+				+0.5
2,478,006	+				+0.5
2,478,006	+				+0.7
2,478,006	+				+0.6
2,478,006	+				+0.4
2,478,006	+				+0.5
2,478,006	+				-0.7
2,478,006	+				+0.6
2,478,006	+				+1.4
2,478,006	+				-0.1
2,478,006	+				-0.5
2,478,006	+				+0.1
2,478,006	+				+0.9
2,478,006	+				-0.3
2,478,006	+				-0.6
2,478,006	+				-0.0
2,478,006	+				+0.5
2,478,006	+				+0.9
2,478,006	+				-0.8
2,478,006	+				-0.7
2,478,006	+				-1.4
2,478,006	+				-0.4
2,478,006	+				-1.0
2,478,006	+				+0.7
2,478,009	-				+0.4
2,478,009	-				-1.4
2,478,014	-				-1.7
2,478,014	-				+0.4
2,478,014	-				-0.9
2,478,014	-				-0.3
2,478,014	-				+0.7
2,478,014	-				-1.8
2,478,014	-				-1.0
2,478,014	-				-1.9
2,478,014	-				-1.9
2,478,014	-				-0.7
2,478,014	-				+0.5
2,478,014	-				+0.4
2,478,014	-				-0.7
2,478,014	-				-0.7
2,478,014	-				-0.7
2,478,014	-				+1.1
2,478,014	-				+0.7
2,478,014	-				+0.2
2,478,014	-				+0.6
2,478,014	-				+1.0
2,478,014	-				-0.3
2,478,014	-				+0.0
2,478,014	-				+0.1
2,478,014	-				+0.9
2,478,014	-				-0.3
2,478,014	-				+0.7
2,478,014	-				+0.6
2,478,014	-				+1.3
2,478,014	-				+0.2
2,478,016	-				+0.6
2,478,037	+				+1.0
2,478,047	+				-0.4
2,478,047	+				+0.3
2,478,051	+				-0.9
2,478,052	+				-2.0
2,478,055	-				+0.7
2,478,055	-				-0.5
2,478,057	+				-0.8
2,478,065	-				+0.2
2,478,065	-				-1.5
2,478,100	+				+1.5
2,478,100	+				-0.6
2,478,100	+				-0.5
2,478,108	-				-0.9
2,478,138	-		GFF2456	0.15	+0.5
2,478,141	-		GFF2456	0.16	+0.4
2,478,151	-		GFF2456	0.18	+0.7
2,478,157	+		GFF2456	0.20	+0.0
2,478,161	-		GFF2456	0.21	+0.0
2,478,169	+		GFF2456	0.22	+0.2
2,478,186	+		GFF2456	0.26	-0.5
2,478,191	+		GFF2456	0.28	+0.7
2,478,192	+		GFF2456	0.28	-0.5
2,478,239	+		GFF2456	0.39	+1.2
2,478,239	+		GFF2456	0.39	-1.0
2,478,240	-		GFF2456	0.39	-2.0
2,478,247	-		GFF2456	0.41	-0.3
2,478,247	-		GFF2456	0.41	-2.1
2,478,260	+		GFF2456	0.44	-0.5
2,478,265	+		GFF2456	0.45	+1.3
2,478,265	+		GFF2456	0.45	-0.5
2,478,270	+		GFF2456	0.46	-1.3
2,478,270	+		GFF2456	0.46	+2.4
2,478,270	+		GFF2456	0.46	+0.7
2,478,270	+		GFF2456	0.46	+0.7
2,478,270	+		GFF2456	0.46	-0.2
2,478,270	+		GFF2456	0.46	+0.3
2,478,270	+		GFF2456	0.46	-0.6
2,478,270	+		GFF2456	0.46	+1.0
2,478,270	+		GFF2456	0.46	+0.1
2,478,270	+		GFF2456	0.46	+0.9
2,478,270	+		GFF2456	0.46	+1.2
2,478,270	+		GFF2456	0.46	-0.6
2,478,270	+		GFF2456	0.46	+0.6
2,478,278	-		GFF2456	0.48	+0.2
2,478,278	-		GFF2456	0.48	-1.1
2,478,278	-		GFF2456	0.48	-1.1
2,478,278	-		GFF2456	0.48	-0.2
2,478,278	-		GFF2456	0.48	-0.9
2,478,278	-		GFF2456	0.48	-1.4
2,478,278	-		GFF2456	0.48	-1.0
2,478,278	-		GFF2456	0.48	-0.6
2,478,278	-		GFF2456	0.48	-0.0
2,478,278	-		GFF2456	0.48	-0.3
2,478,278	-		GFF2456	0.48	-0.3
2,478,278	-		GFF2456	0.48	-0.9
2,478,278	-		GFF2456	0.48	-0.4
2,478,278	-		GFF2456	0.48	+0.5
2,478,278	-		GFF2456	0.48	-1.3
2,478,278	-		GFF2456	0.48	+0.0
2,478,278	-		GFF2456	0.48	-1.3
2,478,278	-		GFF2456	0.48	-1.6
2,478,278	-		GFF2456	0.48	+0.6
2,478,278	-		GFF2456	0.48	+0.7
2,478,278	-		GFF2456	0.48	-1.0
2,478,278	-		GFF2456	0.48	-0.8
2,478,315	-		GFF2456	0.56	+0.1
2,478,317	+		GFF2456	0.57	+0.8
2,478,325	-		GFF2456	0.59	+0.7
2,478,325	-		GFF2456	0.59	+0.7
2,478,359	+		GFF2456	0.66	-0.4
2,478,384	+		GFF2456	0.72	-0.5
2,478,384	+		GFF2456	0.72	+0.1
2,478,384	-		GFF2456	0.72	-0.3
2,478,392	-		GFF2456	0.74	+0.3
2,478,392	-		GFF2456	0.74	-0.5
2,478,392	-		GFF2456	0.74	+0.3
2,478,392	-		GFF2456	0.74	+0.9
2,478,397	-		GFF2456	0.75	+0.2
2,478,418	+		GFF2456	0.80	-0.2
2,478,418	+		GFF2456	0.80	-1.2
2,478,418	+		GFF2456	0.80	-0.2
2,478,418	+		GFF2456	0.80	-1.2
2,478,423	+		GFF2456	0.81	-0.5
2,478,426	-		GFF2456	0.82	+0.2
2,478,426	-		GFF2456	0.82	-0.7
2,478,437	+		GFF2456	0.84	-0.7
2,478,460	+				-1.0
2,478,465	+				-0.3
2,478,468	-				+0.5
2,478,473	-				+0.1
2,478,502	+				-1.3
2,478,507	+				+0.4
2,478,511	+				+0.4
2,478,511	+				-1.2
2,478,511	+				-1.2
2,478,511	+				-0.3
2,478,511	+				-1.4
2,478,511	+				+1.8
2,478,511	+				-0.2
2,478,511	+				-0.6
2,478,511	+				-1.1
2,478,511	+				-0.5
2,478,511	+				-0.4
2,478,511	+				-0.9
2,478,511	+				-1.2
2,478,511	+				+0.4
2,478,511	+				+1.0
2,478,519	-				-1.9
2,478,519	-				-0.2
2,478,519	-				-1.4
2,478,519	-				-0.9
2,478,519	-				-0.1
2,478,519	-				-0.9
2,478,519	-				-0.5
2,478,519	-				-0.4
2,478,519	-				-0.6
2,478,519	-				-1.7
2,478,519	-				-0.2
2,478,521	+				-0.3
2,478,521	+				+1.0
2,478,526	+				-0.1
2,478,526	+				+0.9
2,478,529	-				-0.3
2,478,529	-				-0.7
2,478,529	-				-0.2
2,478,533	+				+1.1
2,478,534	-				-0.2
2,478,534	-				-0.0
2,478,539	+				-0.0
2,478,540	+				+1.1
2,478,546	+				+1.4
2,478,546	+				-1.0
2,478,578	+				-0.5
2,478,612	+				-0.6
2,478,613	-				+0.9
2,478,614	+				+0.8
2,478,614	+				+1.0
2,478,614	+				-0.2
2,478,614	+				+0.4
2,478,614	+				-0.1
2,478,614	+				+0.1
2,478,622	-				-1.6
2,478,622	-				+0.2
2,478,622	-				-0.3
2,478,628	-				+0.1
2,478,660	-		GFF2457	0.13	+0.7
2,478,667	+		GFF2457	0.14	+1.1
2,478,670	+		GFF2457	0.14	-0.7
2,478,675	-		GFF2457	0.14	+0.7
2,478,680	+		GFF2457	0.15	-1.1
2,478,688	-		GFF2457	0.16	+1.0
2,478,688	-		GFF2457	0.16	-0.4
2,478,689	-		GFF2457	0.16	+0.2
2,478,705	-		GFF2457	0.17	-0.9
2,478,715	+		GFF2457	0.18	+0.2
2,478,717	-		GFF2457	0.18	+0.4
2,478,724	+		GFF2457	0.19	+0.0
2,478,736	+		GFF2457	0.20	-1.8
2,478,736	+		GFF2457	0.20	-1.0
2,478,736	+		GFF2457	0.20	-0.2
2,478,742	-		GFF2457	0.21	-0.7
2,478,742	-		GFF2457	0.21	-1.5
2,478,744	-		GFF2457	0.21	+0.5
2,478,765	+		GFF2457	0.23	-1.2
2,478,765	+		GFF2457	0.23	-3.1
2,478,765	+		GFF2457	0.23	-1.1
2,478,765	+		GFF2457	0.23	+0.9
2,478,773	-		GFF2457	0.24	+0.7
2,478,775	-		GFF2457	0.24	-1.2
2,478,787	+		GFF2457	0.25	+1.1
2,478,812	-		GFF2457	0.28	-0.4
2,478,813	+		GFF2457	0.28	-0.2
2,478,842	+		GFF2457	0.31	-2.0
2,478,856	+		GFF2457	0.32	+0.4
2,478,880	+		GFF2457	0.34	+0.6
2,478,882	-		GFF2457	0.35	-0.3
2,478,888	-		GFF2457	0.35	-0.1
2,478,888	-		GFF2457	0.35	-0.2
2,478,893	-		GFF2457	0.36	-0.2
2,478,893	-		GFF2457	0.36	+0.2
2,478,893	-		GFF2457	0.36	-0.8
2,478,893	-		GFF2457	0.36	-1.9
2,478,906	-		GFF2457	0.37	-0.0
2,478,919	+		GFF2457	0.38	-1.0
2,478,927	-		GFF2457	0.39	-2.6
2,478,927	-		GFF2457	0.39	+0.9
2,478,927	-		GFF2457	0.39	-1.1
2,478,930	+		GFF2457	0.39	+0.5
2,478,936	+		GFF2457	0.40	-1.6
2,478,936	+		GFF2457	0.40	-0.4
2,478,936	+		GFF2457	0.40	+0.0
2,478,941	+		GFF2457	0.40	-1.1
2,478,944	-		GFF2457	0.41	-1.3
2,478,944	-		GFF2457	0.41	-0.0
2,478,946	+		GFF2457	0.41	+0.8
2,478,948	+		GFF2457	0.41	-0.6
2,478,959	-		GFF2457	0.42	+0.9
2,478,969	-		GFF2457	0.43	-0.4
2,478,985	-		GFF2457	0.45	+0.1
2,478,985	-		GFF2457	0.45	-0.1
2,478,990	+		GFF2457	0.45	+0.4
2,478,990	+		GFF2457	0.45	-1.7
2,478,990	+		GFF2457	0.45	+0.8
2,478,992	+		GFF2457	0.45	-0.7
2,478,993	-		GFF2457	0.45	+0.2
2,478,993	-		GFF2457	0.45	-0.8
2,478,998	-		GFF2457	0.46	-0.0
2,478,998	-		GFF2457	0.46	+0.6
2,479,026	-		GFF2457	0.49	-0.7
2,479,051	+		GFF2457	0.51	-1.8
2,479,062	+		GFF2457	0.52	-1.9
2,479,062	+		GFF2457	0.52	+0.8
2,479,062	+		GFF2457	0.52	+0.2
2,479,063	+		GFF2457	0.52	+0.7
2,479,063	+		GFF2457	0.52	-0.7
2,479,063	+		GFF2457	0.52	+0.4
2,479,063	+		GFF2457	0.52	+0.4
2,479,070	-		GFF2457	0.53	-2.0
2,479,071	-		GFF2457	0.53	-0.6
2,479,071	-		GFF2457	0.53	-0.3
2,479,071	-		GFF2457	0.53	+1.1
2,479,071	-		GFF2457	0.53	-0.2
2,479,091	+		GFF2457	0.55	+0.4
2,479,091	+		GFF2457	0.55	+1.6
2,479,091	+		GFF2457	0.55	+0.6
2,479,091	+		GFF2457	0.55	-2.6
2,479,091	+		GFF2457	0.55	-0.4
2,479,098	-		GFF2457	0.56	-1.7
2,479,099	-		GFF2457	0.56	+0.3
2,479,099	-		GFF2457	0.56	-1.0
2,479,099	-		GFF2457	0.56	+1.2
2,479,120	+		GFF2457	0.58	+0.7
2,479,120	+		GFF2457	0.58	-2.3
2,479,128	-		GFF2457	0.59	-0.4
2,479,134	+		GFF2457	0.59	+0.8
2,479,187	-		GFF2457	0.64	-2.2
2,479,207	+		GFF2457	0.66	+1.2
2,479,207	+		GFF2457	0.66	-1.2
2,479,207	+		GFF2457	0.66	-1.7
2,479,214	-		GFF2457	0.67	-0.7
2,479,215	-		GFF2457	0.67	+1.1
2,479,215	-		GFF2457	0.67	-0.8
2,479,215	-		GFF2457	0.67	-0.5
2,479,221	-		GFF2457	0.68	+0.3
2,479,235	+		GFF2457	0.69	+0.8
2,479,236	+		GFF2457	0.69	+0.7
2,479,271	+		GFF2457	0.73	+0.9
2,479,287	-		GFF2457	0.74	-1.7
2,479,298	+		GFF2457	0.75	-0.7
2,479,298	+		GFF2457	0.75	-1.3
2,479,298	+		GFF2457	0.75	-2.2
2,479,298	+		GFF2457	0.75	+0.6
2,479,298	+		GFF2457	0.75	-1.1
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