Strain Fitness in Sphingobium sp. HT1-2 around GFF2397

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,417,530	+		GFF2396	0.34	+0.8
2,417,531	-		GFF2396	0.34	-0.3
2,417,531	-		GFF2396	0.34	-2.0
2,417,538	-		GFF2396	0.35	+0.0
2,417,538	-		GFF2396	0.35	+0.9
2,417,552	+		GFF2396	0.36	-0.5
2,417,589	+		GFF2396	0.38	-2.4
2,417,597	-		GFF2396	0.39	-0.2
2,417,601	-		GFF2396	0.39	-0.2
2,417,611	+		GFF2396	0.40	+1.2
2,417,614	-		GFF2396	0.40	+1.3
2,417,619	-		GFF2396	0.40	+0.3
2,417,619	-		GFF2396	0.40	+0.3
2,417,619	-		GFF2396	0.40	-0.7
2,417,622	-		GFF2396	0.40	+0.1
2,417,624	+		GFF2396	0.40	-0.3
2,417,625	+		GFF2396	0.40	-0.4
2,417,625	+		GFF2396	0.40	-0.8
2,417,625	+		GFF2396	0.40	-1.5
2,417,632	-		GFF2396	0.41	-0.1
2,417,634	-		GFF2396	0.41	-0.5
2,417,636	+		GFF2396	0.41	+1.1
2,417,641	+		GFF2396	0.42	-0.6
2,417,641	+		GFF2396	0.42	+1.0
2,417,641	+		GFF2396	0.42	+1.1
2,417,646	+		GFF2396	0.42	-0.9
2,417,649	-		GFF2396	0.42	-0.3
2,417,675	-		GFF2396	0.44	-0.6
2,417,688	+		GFF2396	0.45	+0.2
2,417,736	+		GFF2396	0.48	-0.5
2,417,736	+		GFF2396	0.48	-0.6
2,417,736	+		GFF2396	0.48	-0.3
2,417,736	+		GFF2396	0.48	+0.5
2,417,736	+		GFF2396	0.48	+0.4
2,417,736	+		GFF2396	0.48	+0.8
2,417,741	+		GFF2396	0.48	-0.8
2,417,741	+		GFF2396	0.48	+0.3
2,417,744	-		GFF2396	0.48	-1.0
2,417,744	-		GFF2396	0.48	-1.4
2,417,744	-		GFF2396	0.48	-1.4
2,417,744	-		GFF2396	0.48	-1.2
2,417,744	-		GFF2396	0.48	+0.4
2,417,745	+		GFF2396	0.48	-1.2
2,417,749	-		GFF2396	0.49	+0.3
2,417,749	-		GFF2396	0.49	+0.3
2,417,749	-		GFF2396	0.49	-0.4
2,417,750	+		GFF2396	0.49	-1.2
2,417,750	+		GFF2396	0.49	-0.2
2,417,755	+		GFF2396	0.49	+0.3
2,417,755	+		GFF2396	0.49	+0.7
2,417,755	+		GFF2396	0.49	-0.3
2,417,758	-		GFF2396	0.49	+1.1
2,417,758	-		GFF2396	0.49	-0.6
2,417,758	-		GFF2396	0.49	+1.0
2,417,758	-		GFF2396	0.49	+0.1
2,417,758	-		GFF2396	0.49	-0.9
2,417,763	-		GFF2396	0.50	-0.1
2,417,763	-		GFF2396	0.50	+0.3
2,417,763	-		GFF2396	0.50	+0.9
2,417,763	-		GFF2396	0.50	-0.7
2,417,763	-		GFF2396	0.50	+1.7
2,417,763	-		GFF2396	0.50	-0.2
2,417,763	-		GFF2396	0.50	+0.9
2,417,763	-		GFF2396	0.50	-2.1
2,417,765	+		GFF2396	0.50	-0.3
2,417,767	+		GFF2396	0.50	-0.8
2,417,773	-		GFF2396	0.50	-0.6
2,417,797	+		GFF2396	0.52	-0.1
2,417,797	+		GFF2396	0.52	-0.1
2,417,810	-		GFF2396	0.53	+0.8
2,417,825	-		GFF2396	0.54	+1.3
2,417,886	+		GFF2396	0.58	+1.0
2,417,918	+		GFF2396	0.60	-1.3
2,417,947	+		GFF2396	0.62	-0.1
2,417,952	+		GFF2396	0.62	-1.3
2,417,956	+		GFF2396	0.63	+0.8
2,417,960	-		GFF2396	0.63	-0.5
2,417,963	-		GFF2396	0.63	-1.5
2,417,974	-		GFF2396	0.64	-1.8
2,417,976	+		GFF2396	0.64	+0.3
2,417,976	+		GFF2396	0.64	+1.0
2,417,977	+		GFF2396	0.64	-1.0
2,417,982	+		GFF2396	0.64	-2.0
2,417,984	-		GFF2396	0.64	+0.3
2,418,003	+		GFF2396	0.66	+0.5
2,418,010	-		GFF2396	0.66	-0.2
2,418,013	+		GFF2396	0.66	-1.5
2,418,014	+		GFF2396	0.66	-0.8
2,418,014	+		GFF2396	0.66	-0.1
2,418,015	+		GFF2396	0.66	-0.2
2,418,015	+		GFF2396	0.66	+0.0
2,418,021	-		GFF2396	0.67	-0.7
2,418,022	-		GFF2396	0.67	-1.3
2,418,023	-		GFF2396	0.67	+0.2
2,418,023	-		GFF2396	0.67	-1.0
2,418,023	-		GFF2396	0.67	-0.5
2,418,024	+		GFF2396	0.67	-0.2
2,418,024	+		GFF2396	0.67	+0.9
2,418,024	+		GFF2396	0.67	+0.7
2,418,031	-		GFF2396	0.68	+0.4
2,418,032	-		GFF2396	0.68	-1.0
2,418,032	-		GFF2396	0.68	+0.2
2,418,054	+		GFF2396	0.69	-0.2
2,418,059	+		GFF2396	0.69	-0.1
2,418,064	+		GFF2396	0.70	+2.5
2,418,064	+		GFF2396	0.70	+0.4
2,418,067	-		GFF2396	0.70	-0.5
2,418,071	+		GFF2396	0.70	-0.5
2,418,072	-		GFF2396	0.70	-1.5
2,418,072	-		GFF2396	0.70	-0.8
2,418,072	-		GFF2396	0.70	+0.4
2,418,072	-		GFF2396	0.70	-0.6
2,418,072	-		GFF2396	0.70	-0.9
2,418,072	-		GFF2396	0.70	-1.5
2,418,072	-		GFF2396	0.70	+1.0
2,418,079	-		GFF2396	0.71	+0.1
2,418,079	-		GFF2396	0.71	-0.5
2,418,082	+		GFF2396	0.71	+0.4
2,418,093	+		GFF2396	0.72	+0.5
2,418,094	+		GFF2396	0.72	+0.4
2,418,094	+		GFF2396	0.72	-0.9
2,418,099	+		GFF2396	0.72	-1.0
2,418,099	+		GFF2396	0.72	-0.8
2,418,099	+		GFF2396	0.72	-2.5
2,418,099	+		GFF2396	0.72	-1.6
2,418,099	+		GFF2396	0.72	+0.3
2,418,099	+		GFF2396	0.72	+0.2
2,418,101	-		GFF2396	0.72	-0.3
2,418,102	-		GFF2396	0.72	-0.1
2,418,112	-		GFF2396	0.73	+0.2
2,418,114	+		GFF2396	0.73	-0.3
2,418,119	+		GFF2396	0.73	-1.6
2,418,122	-		GFF2396	0.74	-1.3
2,418,122	-		GFF2396	0.74	-1.6
2,418,124	+		GFF2396	0.74	+1.0
2,418,137	+		GFF2396	0.75	-0.7
2,418,137	+		GFF2396	0.75	+0.8
2,418,137	+		GFF2396	0.75	+1.0
2,418,144	+		GFF2396	0.75	-0.1
2,418,144	+		GFF2396	0.75	-0.5
2,418,144	+		GFF2396	0.75	+1.2
2,418,144	+		GFF2396	0.75	+0.2
2,418,144	+		GFF2396	0.75	-2.4
2,418,144	+		GFF2396	0.75	+0.3
2,418,145	-		GFF2396	0.75	-0.7
2,418,145	-		GFF2396	0.75	-1.4
2,418,149	+		GFF2396	0.75	-0.7
2,418,149	+		GFF2396	0.75	+0.2
2,418,149	+		GFF2396	0.75	+0.1
2,418,149	+		GFF2396	0.75	-1.8
2,418,149	+		GFF2396	0.75	-1.6
2,418,149	+		GFF2396	0.75	-1.9
2,418,149	+		GFF2396	0.75	+0.7
2,418,149	+		GFF2396	0.75	-0.3
2,418,152	-		GFF2396	0.76	+0.5
2,418,152	-		GFF2396	0.76	+0.7
2,418,152	-		GFF2396	0.76	-0.7
2,418,152	-		GFF2396	0.76	-0.4
2,418,152	-		GFF2396	0.76	-1.5
2,418,152	-		GFF2396	0.76	+0.6
2,418,152	-		GFF2396	0.76	+0.6
2,418,152	-		GFF2396	0.76	+1.3
2,418,152	-		GFF2396	0.76	+0.9
2,418,152	-		GFF2396	0.76	-0.5
2,418,152	-		GFF2396	0.76	-0.3
2,418,152	-		GFF2396	0.76	-0.7
2,418,155	+		GFF2396	0.76	-0.5
2,418,157	-		GFF2396	0.76	-0.5
2,418,157	-		GFF2396	0.76	-0.3
2,418,157	-		GFF2396	0.76	-0.9
2,418,161	+		GFF2396	0.76	+0.0
2,418,169	-		GFF2396	0.77	+0.3
2,418,169	-		GFF2396	0.77	-0.7
2,418,181	+		GFF2396	0.78	-0.1
2,418,204	-		GFF2396	0.79	+0.3
2,418,213	-		GFF2396	0.80	-2.1
2,418,213	-		GFF2396	0.80	-1.4
2,418,214	-		GFF2396	0.80	-1.6
2,418,224	+		GFF2396	0.80	-0.9
2,418,232	-		GFF2396	0.81	+1.3
2,418,279	+		GFF2396	0.84	-0.1
2,418,287	-		GFF2396	0.85	+0.0
2,418,287	-		GFF2396	0.85	+0.2
2,418,287	-		GFF2396	0.85	-1.9
2,418,291	-		GFF2396	0.85	-0.9
2,418,291	-		GFF2396	0.85	-0.5
2,418,313	+		GFF2396	0.86	+0.6
2,418,313	+		GFF2396	0.86	+0.6
2,418,313	+		GFF2396	0.86	-0.5
2,418,313	+		GFF2396	0.86	-0.8
2,418,313	+		GFF2396	0.86	+0.1
2,418,313	+		GFF2396	0.86	-0.2
2,418,313	+		GFF2396	0.86	-0.7
2,418,313	+		GFF2396	0.86	-1.1
2,418,313	+		GFF2396	0.86	-1.1
2,418,321	-		GFF2396	0.87	-1.2
2,418,321	-		GFF2396	0.87	-0.3
2,418,321	-		GFF2396	0.87	+0.7
2,418,321	-		GFF2396	0.87	-0.6
2,418,347	+		GFF2396	0.89	-2.5
2,418,349	+		GFF2396	0.89	-0.8
2,418,358	-		GFF2396	0.89	-0.3
2,418,368	+				-0.7
2,418,368	+				-0.9
2,418,373	+				-0.8
2,418,376	-				-1.4
2,418,381	-				+0.2
2,418,381	-				-0.4
2,418,381	-				+0.7
2,418,381	-				-0.7
2,418,390	-				-0.2
2,418,390	-				+0.3
2,418,407	+				-1.2
2,418,433	+				-2.3
2,418,433	+				+0.6
2,418,436	-				-1.8
2,418,437	+				+0.0
2,418,437	+				-1.1
2,418,443	+				+2.2
2,418,534	+				-0.8
2,418,537	-				-1.3
2,418,540	-				-0.1
2,418,547	-				-0.6
2,418,582	+				-1.1
2,418,587	+				-0.7
2,418,592	+				-0.9
2,418,592	+				-1.0
2,418,592	+				-1.3
2,418,592	+				+1.4
2,418,592	+				+0.1
2,418,599	-				-0.2
2,418,599	-				-1.2
2,418,599	-				-0.8
2,418,599	-				-1.4
2,418,599	-				-0.2
2,418,599	-				+0.9
2,418,599	-				-1.5
2,418,600	-				+0.2
2,418,600	-				-0.2
2,418,600	-				-1.0
2,418,600	-				-0.4
2,418,600	-				+0.5
2,418,600	-				+0.0
2,418,600	-				-1.0
2,418,600	-				+0.6
2,418,600	-				+0.7
2,418,605	-				-1.6
2,418,621	+				-0.7
2,418,636	-		GFF2397	0.10	+0.0
2,418,636	-		GFF2397	0.10	+0.0
2,418,636	-		GFF2397	0.10	-0.3
2,418,637	+		GFF2397	0.11	-0.8
2,418,645	-		GFF2397	0.11	+0.8
2,418,655	-		GFF2397	0.12	-0.5
2,418,756	+		GFF2397	0.22	+0.8
2,418,764	-		GFF2397	0.23	-0.2
2,418,764	-		GFF2397	0.23	+0.5
2,418,764	-		GFF2397	0.23	-1.5
2,418,793	+		GFF2397	0.26	-0.1
2,418,801	-		GFF2397	0.27	-1.9
2,418,835	+		GFF2397	0.30	-0.3
2,418,837	+		GFF2397	0.30	-1.2
2,418,850	+		GFF2397	0.31	+0.8
2,418,850	+		GFF2397	0.31	-0.3
2,418,850	+		GFF2397	0.31	+0.5
2,418,850	+		GFF2397	0.31	-2.1
2,418,850	+		GFF2397	0.31	+0.3
2,418,850	+		GFF2397	0.31	+0.8
2,418,850	+		GFF2397	0.31	-0.5
2,418,850	+		GFF2397	0.31	+0.9
2,418,850	+		GFF2397	0.31	-1.0
2,418,850	+		GFF2397	0.31	-1.5
2,418,850	+		GFF2397	0.31	-1.1
2,418,855	+		GFF2397	0.32	-0.1
2,418,855	+		GFF2397	0.32	+0.6
2,418,858	-		GFF2397	0.32	-0.4
2,418,858	-		GFF2397	0.32	-0.7
2,418,858	-		GFF2397	0.32	-2.2
2,418,858	-		GFF2397	0.32	-0.5
2,418,858	-		GFF2397	0.32	-1.9
2,418,858	-		GFF2397	0.32	+0.0
2,418,858	-		GFF2397	0.32	-1.2
2,418,860	+		GFF2397	0.32	-1.3
2,418,865	+		GFF2397	0.33	-1.3
2,418,901	-		GFF2397	0.36	-0.1
2,418,918	-		GFF2397	0.38	+1.0
2,418,920	+		GFF2397	0.38	+1.5
2,418,920	+		GFF2397	0.38	+0.5
2,418,920	+		GFF2397	0.38	-1.0
2,418,920	+		GFF2397	0.38	+0.4
2,418,928	-		GFF2397	0.39	-0.5
2,418,928	-		GFF2397	0.39	-1.6
2,418,941	+		GFF2397	0.40	-1.2
2,418,941	+		GFF2397	0.40	-0.4
2,418,947	+		GFF2397	0.41	+0.6
2,418,947	+		GFF2397	0.41	-1.8
2,418,963	-		GFF2397	0.42	-0.6
2,418,967	+		GFF2397	0.43	-0.4
2,418,968	-		GFF2397	0.43	-1.4
2,418,973	-		GFF2397	0.43	-2.4
2,418,975	-		GFF2397	0.43	-1.2
2,418,981	-		GFF2397	0.44	-0.2
2,418,981	-		GFF2397	0.44	-0.1
2,418,985	-		GFF2397	0.44	+1.2
2,418,991	-		GFF2397	0.45	+0.2
2,419,000	+		GFF2397	0.46	+1.3
2,419,000	+		GFF2397	0.46	-0.1
2,419,021	-		GFF2397	0.48	+0.5
2,419,054	+		GFF2397	0.51	-1.2
2,419,085	+		GFF2397	0.54	-0.3
2,419,093	-		GFF2397	0.55	-0.4
2,419,158	-		GFF2397	0.61	-0.4
2,419,275	+		GFF2397	0.73	-1.7
2,419,292	-		GFF2397	0.74	+0.9
2,419,309	+		GFF2397	0.76	-1.1
2,419,314	+		GFF2397	0.76	-2.1
2,419,314	+		GFF2397	0.76	-0.2
2,419,319	+		GFF2397	0.77	+1.0
2,419,322	-		GFF2397	0.77	-0.6
2,419,322	-		GFF2397	0.77	+1.1
2,419,351	+		GFF2397	0.80	+0.3
2,419,351	+		GFF2397	0.80	+1.0
2,419,351	+		GFF2397	0.80	-2.9
2,419,351	+		GFF2397	0.80	-0.3
2,419,359	-		GFF2397	0.81	+0.4
2,419,359	-		GFF2397	0.81	-1.1
2,419,359	-		GFF2397	0.81	-0.2
2,419,359	-		GFF2397	0.81	-0.4
2,419,359	-		GFF2397	0.81	-0.4
2,419,361	+		GFF2397	0.81	+0.4
2,419,389	+		GFF2397	0.84	-0.1
2,419,389	+		GFF2397	0.84	-1.4
2,419,397	-		GFF2397	0.84	-1.0
2,419,397	-		GFF2397	0.84	+0.4
2,419,397	-		GFF2397	0.84	-0.4
2,419,397	-		GFF2397	0.84	-0.1
2,419,425	+		GFF2397	0.87	+0.3
2,419,440	+		GFF2397	0.89	-2.1
2,419,441	-		GFF2397	0.89	+0.3
2,419,468	+				-2.6
2,419,510	+				-1.7
2,419,510	+				-1.6
2,419,514	-				-0.7
2,419,542	-				+1.7
2,419,544	+				-0.1
2,419,544	+				-1.6
2,419,544	+				-1.0
2,419,544	+				-1.5
2,419,544	+				-1.2
2,419,544	+				+0.3
2,419,544	+				-0.3
2,419,544	+				-0.9
2,419,544	+				-0.8
2,419,544	+				-0.3
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