Strain Fitness in Sphingobium sp. HT1-2 around GFF2261

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,288,184	-		GFF2260	0.12	-3.3
2,288,218	+		GFF2260	0.15	+1.3
2,288,226	-		GFF2260	0.16	-1.3
2,288,239	-		GFF2260	0.17	-0.4
2,288,247	-		GFF2260	0.18	+1.0
2,288,247	-		GFF2260	0.18	-1.4
2,288,252	+		GFF2260	0.18	+1.0
2,288,253	+		GFF2260	0.18	-0.2
2,288,261	-		GFF2260	0.19	-0.0
2,288,262	+		GFF2260	0.19	-1.6
2,288,262	+		GFF2260	0.19	-1.4
2,288,262	+		GFF2260	0.19	+0.2
2,288,262	+		GFF2260	0.19	-1.5
2,288,262	+		GFF2260	0.19	-0.0
2,288,262	+		GFF2260	0.19	-1.4
2,288,262	+		GFF2260	0.19	-0.1
2,288,262	+		GFF2260	0.19	+0.4
2,288,262	+		GFF2260	0.19	+0.2
2,288,262	+		GFF2260	0.19	-1.0
2,288,270	-		GFF2260	0.20	-0.4
2,288,270	-		GFF2260	0.20	-0.5
2,288,270	-		GFF2260	0.20	+0.2
2,288,270	-		GFF2260	0.20	+0.5
2,288,270	-		GFF2260	0.20	-0.0
2,288,270	-		GFF2260	0.20	-1.1
2,288,270	-		GFF2260	0.20	+0.3
2,288,270	-		GFF2260	0.20	-0.4
2,288,270	-		GFF2260	0.20	-0.2
2,288,270	-		GFF2260	0.20	+0.7
2,288,270	-		GFF2260	0.20	-0.6
2,288,270	-		GFF2260	0.20	+0.7
2,288,270	-		GFF2260	0.20	+0.7
2,288,270	-		GFF2260	0.20	-1.1
2,288,280	+		GFF2260	0.20	+0.4
2,288,280	+		GFF2260	0.20	-0.1
2,288,285	-		GFF2260	0.21	-0.3
2,288,293	-		GFF2260	0.22	-1.2
2,288,311	+		GFF2260	0.23	-0.2
2,288,311	+		GFF2260	0.23	+0.2
2,288,311	+		GFF2260	0.23	-0.5
2,288,313	+		GFF2260	0.23	-1.1
2,288,313	+		GFF2260	0.23	+0.2
2,288,313	+		GFF2260	0.23	+0.8
2,288,313	+		GFF2260	0.23	-2.2
2,288,318	+		GFF2260	0.24	-0.4
2,288,319	-		GFF2260	0.24	+1.6
2,288,319	-		GFF2260	0.24	-0.3
2,288,321	+		GFF2260	0.24	+1.3
2,288,321	-		GFF2260	0.24	-1.2
2,288,321	-		GFF2260	0.24	+0.2
2,288,321	-		GFF2260	0.24	-0.3
2,288,321	-		GFF2260	0.24	-1.6
2,288,328	+		GFF2260	0.25	-1.0
2,288,332	+		GFF2260	0.25	-1.1
2,288,333	+		GFF2260	0.25	-0.4
2,288,333	+		GFF2260	0.25	-0.3
2,288,348	-		GFF2260	0.26	-0.3
2,288,366	+		GFF2260	0.28	-0.0
2,288,399	-		GFF2260	0.31	+0.1
2,288,399	-		GFF2260	0.31	+0.2
2,288,399	-		GFF2260	0.31	+0.5
2,288,404	+		GFF2260	0.31	-0.3
2,288,407	-		GFF2260	0.32	-0.2
2,288,409	+		GFF2260	0.32	+0.3
2,288,409	+		GFF2260	0.32	+0.3
2,288,411	+		GFF2260	0.32	-0.6
2,288,423	+		GFF2260	0.33	+1.3
2,288,423	+		GFF2260	0.33	-2.7
2,288,428	+		GFF2260	0.33	+0.8
2,288,428	+		GFF2260	0.33	+1.3
2,288,428	+		GFF2260	0.33	-1.9
2,288,428	+		GFF2260	0.33	+0.2
2,288,428	+		GFF2260	0.33	-0.1
2,288,428	+		GFF2260	0.33	+0.6
2,288,428	+		GFF2260	0.33	+0.3
2,288,428	+		GFF2260	0.33	-1.5
2,288,428	+		GFF2260	0.33	+1.2
2,288,436	-		GFF2260	0.34	-1.5
2,288,436	-		GFF2260	0.34	-0.5
2,288,436	-		GFF2260	0.34	+1.2
2,288,436	-		GFF2260	0.34	-1.0
2,288,436	-		GFF2260	0.34	+0.1
2,288,436	-		GFF2260	0.34	+1.4
2,288,437	+		GFF2260	0.34	+0.8
2,288,467	-		GFF2260	0.37	+0.0
2,288,467	-		GFF2260	0.37	-2.1
2,288,475	+		GFF2260	0.38	-0.4
2,288,475	+		GFF2260	0.38	-0.8
2,288,477	-		GFF2260	0.38	-1.2
2,288,483	-		GFF2260	0.38	+0.5
2,288,502	+		GFF2260	0.40	+0.8
2,288,502	+		GFF2260	0.40	-0.5
2,288,502	+		GFF2260	0.40	+0.3
2,288,502	+		GFF2260	0.40	+0.3
2,288,502	+		GFF2260	0.40	-1.0
2,288,502	+		GFF2260	0.40	-0.2
2,288,502	+		GFF2260	0.40	-0.1
2,288,510	-		GFF2260	0.41	-1.9
2,288,510	-		GFF2260	0.41	+1.5
2,288,510	-		GFF2260	0.41	-1.3
2,288,510	-		GFF2260	0.41	-1.3
2,288,510	-		GFF2260	0.41	+0.6
2,288,514	+		GFF2260	0.41	-1.5
2,288,520	+		GFF2260	0.41	+0.4
2,288,543	-		GFF2260	0.44	+0.7
2,288,547	+		GFF2260	0.44	+0.6
2,288,547	+		GFF2260	0.44	-1.5
2,288,555	+		GFF2260	0.45	-1.1
2,288,555	-		GFF2260	0.45	-0.8
2,288,563	-		GFF2260	0.45	-1.3
2,288,568	-		GFF2260	0.46	-0.4
2,288,568	-		GFF2260	0.46	-0.1
2,288,570	-		GFF2260	0.46	-0.3
2,288,592	-		GFF2260	0.48	-1.1
2,288,612	+		GFF2260	0.50	-0.9
2,288,645	+		GFF2260	0.52	+0.0
2,288,651	+		GFF2260	0.53	+1.0
2,288,651	+		GFF2260	0.53	+0.9
2,288,659	-		GFF2260	0.54	-0.7
2,288,659	-		GFF2260	0.54	+0.2
2,288,659	-		GFF2260	0.54	-0.6
2,288,659	-		GFF2260	0.54	+0.6
2,288,659	-		GFF2260	0.54	-1.4
2,288,684	+		GFF2260	0.56	-0.4
2,288,695	+		GFF2260	0.57	+0.2
2,288,695	+		GFF2260	0.57	+0.6
2,288,745	+		GFF2260	0.61	+0.9
2,288,749	-		GFF2260	0.62	-0.7
2,288,751	+		GFF2260	0.62	-0.4
2,288,753	-		GFF2260	0.62	+0.6
2,288,753	-		GFF2260	0.62	-0.7
2,288,753	-		GFF2260	0.62	-0.1
2,288,753	-		GFF2260	0.62	+1.8
2,288,757	+		GFF2260	0.62	-0.6
2,288,757	+		GFF2260	0.62	-0.7
2,288,757	+		GFF2260	0.62	-2.5
2,288,757	+		GFF2260	0.62	+0.1
2,288,757	+		GFF2260	0.62	+0.9
2,288,760	-		GFF2260	0.63	+1.2
2,288,765	-		GFF2260	0.63	+0.1
2,288,765	-		GFF2260	0.63	+1.2
2,288,769	+		GFF2260	0.63	+0.1
2,288,787	+		GFF2260	0.65	+0.3
2,288,812	+		GFF2260	0.67	-1.8
2,288,820	-		GFF2260	0.68	-1.6
2,288,820	-		GFF2260	0.68	-0.3
2,288,827	+		GFF2260	0.68	+0.9
2,288,832	+		GFF2260	0.69	-1.5
2,288,837	+		GFF2260	0.69	-3.0
2,288,837	+		GFF2260	0.69	-2.0
2,288,837	+		GFF2260	0.69	+0.2
2,288,837	+		GFF2260	0.69	+0.2
2,288,845	-		GFF2260	0.70	-0.4
2,288,860	+		GFF2260	0.71	+1.0
2,288,860	+		GFF2260	0.71	+1.4
2,288,868	-		GFF2260	0.72	-0.5
2,288,885	-		GFF2260	0.74	-1.9
2,288,916	+		GFF2260	0.76	-1.4
2,288,919	-		GFF2260	0.76	-0.0
2,288,960	+		GFF2260	0.80	+1.4
2,288,968	-		GFF2260	0.81	+0.9
2,288,970	+		GFF2260	0.81	-0.4
2,288,970	+		GFF2260	0.81	+1.1
2,288,970	+		GFF2260	0.81	-0.6
2,288,976	-		GFF2260	0.81	-0.6
2,288,976	-		GFF2260	0.81	+1.4
2,288,978	+		GFF2260	0.82	-0.6
2,288,978	-		GFF2260	0.82	-1.8
2,288,986	-		GFF2260	0.82	-1.9
2,288,986	-		GFF2260	0.82	-0.3
2,288,993	+		GFF2260	0.83	+0.7
2,288,993	+		GFF2260	0.83	-0.4
2,289,000	-		GFF2260	0.84	-1.0
2,289,000	-		GFF2260	0.84	-0.4
2,289,000	-		GFF2260	0.84	-0.3
2,289,004	+		GFF2260	0.84	-0.0
2,289,009	+		GFF2260	0.84	-1.4
2,289,016	+		GFF2260	0.85	-2.7
2,289,017	-		GFF2260	0.85	+1.4
2,289,017	-		GFF2260	0.85	+1.3
2,289,060	+		GFF2260	0.89	-2.0
2,289,069	+		GFF2260	0.90	-1.7
2,289,070	+		GFF2260	0.90	-1.2
2,289,070	+		GFF2260	0.90	-0.6
2,289,071	+		GFF2260	0.90	-2.1
2,289,071	-		GFF2260	0.90	-1.3
2,289,085	-				-0.0
2,289,095	-				-2.7
2,289,100	+				-2.0
2,289,100	+				+0.5
2,289,108	-				+0.2
2,289,108	-				-0.1
2,289,108	-				-0.0
2,289,108	-				-0.2
2,289,108	-				-0.6
2,289,108	-				-1.4
2,289,113	+				-1.4
2,289,113	+				-0.4
2,289,125	+				-0.4
2,289,135	+				-1.2
2,289,153	+				-0.5
2,289,177	-				-0.2
2,289,180	+				-1.3
2,289,188	-				+0.6
2,289,207	+				+0.1
2,289,212	+				+0.7
2,289,251	+				-0.3
2,289,252	+				-0.5
2,289,254	-				-1.3
2,289,256	+				+0.2
2,289,259	-				-0.4
2,289,260	-				+0.8
2,289,261	+				-0.4
2,289,279	+				-2.4
2,289,279	+				-0.3
2,289,279	+				-0.3
2,289,279	+				-1.0
2,289,279	+				-1.8
2,289,287	-				-1.3
2,289,287	-				-1.6
2,289,287	-				+1.1
2,289,294	-		GFF2261	0.10	+0.8
2,289,304	-		GFF2261	0.11	-1.3
2,289,315	+		GFF2261	0.12	+0.4
2,289,315	+		GFF2261	0.12	-2.3
2,289,317	+		GFF2261	0.13	-1.4
2,289,317	+		GFF2261	0.13	+0.8
2,289,320	-		GFF2261	0.13	-0.3
2,289,325	-		GFF2261	0.13	-2.7
2,289,325	-		GFF2261	0.13	+0.7
2,289,325	-		GFF2261	0.13	-0.8
2,289,325	-		GFF2261	0.13	-2.0
2,289,325	-		GFF2261	0.13	-2.1
2,289,325	-		GFF2261	0.13	-0.2
2,289,325	-		GFF2261	0.13	+0.8
2,289,325	-		GFF2261	0.13	+0.8
2,289,330	-		GFF2261	0.14	-1.6
2,289,362	+		GFF2261	0.17	+0.5
2,289,370	-		GFF2261	0.18	+0.7
2,289,381	+		GFF2261	0.19	-2.1
2,289,383	+		GFF2261	0.19	-0.6
2,289,408	-		GFF2261	0.21	-0.3
2,289,423	-		GFF2261	0.23	-2.0
2,289,428	-		GFF2261	0.23	-0.3
2,289,442	-		GFF2261	0.24	-0.6
2,289,445	+		GFF2261	0.25	-1.5
2,289,472	-		GFF2261	0.27	-0.3
2,289,539	+		GFF2261	0.34	+0.4
2,289,542	+		GFF2261	0.34	-1.4
2,289,543	+		GFF2261	0.34	-0.4
2,289,548	-		GFF2261	0.34	-0.1
2,289,548	-		GFF2261	0.34	-1.0
2,289,562	+		GFF2261	0.36	+1.5
2,289,566	+		GFF2261	0.36	+0.0
2,289,574	-		GFF2261	0.37	-1.1
2,289,575	-		GFF2261	0.37	-1.1
2,289,584	-		GFF2261	0.38	-0.8
2,289,623	+		GFF2261	0.42	-2.0
2,289,627	-		GFF2261	0.42	-1.2
2,289,647	+		GFF2261	0.44	-0.1
2,289,652	+		GFF2261	0.44	-0.1
2,289,652	+		GFF2261	0.44	-0.4
2,289,652	+		GFF2261	0.44	-1.1
2,289,652	+		GFF2261	0.44	-0.6
2,289,652	+		GFF2261	0.44	+1.5
2,289,660	-		GFF2261	0.45	-1.4
2,289,660	-		GFF2261	0.45	-2.4
2,289,660	-		GFF2261	0.45	-1.2
2,289,660	-		GFF2261	0.45	+0.0
2,289,660	-		GFF2261	0.45	-1.3
2,289,660	-		GFF2261	0.45	+0.1
2,289,660	-		GFF2261	0.45	-0.9
2,289,688	+		GFF2261	0.48	-1.7
2,289,696	+		GFF2261	0.48	+0.3
2,289,701	+		GFF2261	0.49	+1.4
2,289,704	-		GFF2261	0.49	+0.5
2,289,704	-		GFF2261	0.49	-1.9
2,289,709	-		GFF2261	0.50	-1.3
2,289,714	+		GFF2261	0.50	+1.8
2,289,714	-		GFF2261	0.50	-0.9
2,289,719	+		GFF2261	0.51	+0.6
2,289,719	+		GFF2261	0.51	-1.3
2,289,724	+		GFF2261	0.51	-2.2
2,289,724	+		GFF2261	0.51	+0.2
2,289,732	-		GFF2261	0.52	-1.1
2,289,739	-		GFF2261	0.53	-1.8
2,289,760	-		GFF2261	0.54	+0.1
2,289,775	-		GFF2261	0.56	-0.0
2,289,802	+		GFF2261	0.58	-0.8
2,289,823	+		GFF2261	0.60	+0.4
2,289,823	+		GFF2261	0.60	-0.3
2,289,831	-		GFF2261	0.61	-0.6
2,289,831	-		GFF2261	0.61	-0.2
2,289,851	+		GFF2261	0.63	-0.7
2,289,853	+		GFF2261	0.63	-0.2
2,289,861	-		GFF2261	0.64	-0.4
2,289,872	+		GFF2261	0.65	-0.8
2,289,882	+		GFF2261	0.66	-0.6
2,289,920	+		GFF2261	0.70	-1.4
2,289,922	-		GFF2261	0.70	-0.4
2,289,952	+		GFF2261	0.73	+0.3
2,289,980	+		GFF2261	0.75	-0.7
2,289,987	-		GFF2261	0.76	+0.5
2,290,000	-		GFF2261	0.77	+0.3
2,290,004	+		GFF2261	0.78	+0.8
2,290,004	+		GFF2261	0.78	-0.7
2,290,012	-		GFF2261	0.78	+1.1
2,290,012	-		GFF2261	0.78	+0.2
2,290,036	+		GFF2261	0.81	+0.7
2,290,054	+		GFF2261	0.82	+0.3
2,290,054	+		GFF2261	0.82	-0.4
2,290,067	-		GFF2261	0.83	-0.6
2,290,099	+		GFF2261	0.86	-1.3
2,290,099	+		GFF2261	0.86	-1.4
2,290,099	+		GFF2261	0.86	+0.2
2,290,099	+		GFF2261	0.86	+1.9
2,290,105	+		GFF2261	0.87	-0.7
2,290,105	+		GFF2261	0.87	+1.0
2,290,105	+		GFF2261	0.87	-0.6
2,290,107	-		GFF2261	0.87	-0.4
2,290,107	-		GFF2261	0.87	+1.1
2,290,107	-		GFF2261	0.87	+0.2
2,290,113	-		GFF2261	0.88	+0.1
2,290,113	-		GFF2261	0.88	+1.7
2,290,113	-		GFF2261	0.88	-0.7
2,290,113	-		GFF2261	0.88	-0.6
2,290,113	-		GFF2261	0.88	-1.1
2,290,113	-		GFF2261	0.88	-0.9
2,290,118	+		GFF2261	0.88	+0.4
2,290,152	-				+0.2
2,290,170	+				-0.3
2,290,170	+				+0.8
2,290,170	+				-0.1
2,290,170	+				+0.1
2,290,170	+				-1.2
2,290,170	+				+1.0
2,290,170	+				+0.1
2,290,178	-				-0.1
2,290,178	-				-0.4
2,290,178	-				+0.3
2,290,178	-				-0.3
2,290,178	-				-2.7
2,290,178	-				-1.6
2,290,221	-				-1.5
2,290,250	-				+0.4
2,290,307	+		GFF2262	0.54	-0.5
2,290,317	-		GFF2262	0.62	+0.4
2,290,322	-		GFF2262	0.67	-0.5
2,290,324	+		GFF2262	0.68	+0.2
2,290,327	-		GFF2262	0.71	+1.9
2,290,363	-				+1.2
2,290,505	+				+0.6
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