Strain Fitness in Sphingobium sp. HT1-2 around GFF1844

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,867,533	-		GFF1843	0.32	-1.8
1,867,550	+		GFF1843	0.33	-1.0
1,867,559	-		GFF1843	0.34	+0.4
1,867,561	-		GFF1843	0.34	+0.4
1,867,592	-		GFF1843	0.37	-0.7
1,867,616	+		GFF1843	0.38	-0.2
1,867,626	+		GFF1843	0.39	-0.8
1,867,634	-		GFF1843	0.40	-1.2
1,867,642	-		GFF1843	0.40	+0.7
1,867,674	+		GFF1843	0.43	-0.1
1,867,682	-		GFF1843	0.43	+0.1
1,867,682	-		GFF1843	0.43	+0.3
1,867,699	-		GFF1843	0.45	+0.7
1,867,705	+		GFF1843	0.45	-2.1
1,867,705	+		GFF1843	0.45	-1.3
1,867,706	+		GFF1843	0.45	-1.3
1,867,706	+		GFF1843	0.45	+0.5
1,867,728	-		GFF1843	0.47	-0.4
1,867,733	-		GFF1843	0.47	-1.4
1,867,739	+		GFF1843	0.48	+0.1
1,867,777	+		GFF1843	0.51	-0.6
1,867,795	-		GFF1843	0.52	-2.2
1,867,805	+		GFF1843	0.53	-1.5
1,867,834	+		GFF1843	0.55	-1.3
1,867,837	-		GFF1843	0.55	-0.3
1,867,873	+		GFF1843	0.58	+0.3
1,867,873	+		GFF1843	0.58	+1.1
1,867,899	-		GFF1843	0.60	-0.7
1,867,922	+		GFF1843	0.62	-0.6
1,867,922	+		GFF1843	0.62	-2.0
1,867,928	+		GFF1843	0.62	+0.0
1,867,930	-		GFF1843	0.63	+0.5
1,867,930	-		GFF1843	0.63	+0.1
1,867,947	-		GFF1843	0.64	-0.7
1,867,958	+		GFF1843	0.65	-1.3
1,867,980	-		GFF1843	0.66	-0.2
1,867,982	+		GFF1843	0.67	+0.5
1,867,982	+		GFF1843	0.67	-0.7
1,867,990	-		GFF1843	0.67	-0.2
1,868,003	-		GFF1843	0.68	+0.3
1,868,041	+		GFF1843	0.71	-1.0
1,868,054	-		GFF1843	0.72	-0.7
1,868,059	-		GFF1843	0.72	-0.9
1,868,082	+		GFF1843	0.74	-1.3
1,868,084	-		GFF1843	0.74	-0.3
1,868,105	-		GFF1843	0.76	-0.4
1,868,131	+		GFF1843	0.78	-0.5
1,868,135	+		GFF1843	0.78	-1.2
1,868,135	+		GFF1843	0.78	-0.2
1,868,135	+		GFF1843	0.78	+1.5
1,868,135	+		GFF1843	0.78	-0.7
1,868,135	+		GFF1843	0.78	-0.1
1,868,135	+		GFF1843	0.78	+1.2
1,868,135	+		GFF1843	0.78	+0.5
1,868,135	+		GFF1843	0.78	+0.5
1,868,135	+		GFF1843	0.78	-1.0
1,868,135	+		GFF1843	0.78	-0.3
1,868,135	+		GFF1843	0.78	-0.6
1,868,135	+		GFF1843	0.78	+0.1
1,868,136	+		GFF1843	0.78	-1.7
1,868,143	+		GFF1843	0.79	-0.4
1,868,143	-		GFF1843	0.79	-0.1
1,868,143	-		GFF1843	0.79	+0.5
1,868,143	-		GFF1843	0.79	-1.5
1,868,143	-		GFF1843	0.79	-0.8
1,868,143	-		GFF1843	0.79	+0.7
1,868,143	-		GFF1843	0.79	+0.1
1,868,143	-		GFF1843	0.79	-0.4
1,868,143	-		GFF1843	0.79	-0.7
1,868,143	-		GFF1843	0.79	+0.5
1,868,143	-		GFF1843	0.79	-0.9
1,868,143	-		GFF1843	0.79	-0.5
1,868,144	-		GFF1843	0.79	+0.5
1,868,146	+		GFF1843	0.79	-0.4
1,868,149	-		GFF1843	0.79	-2.3
1,868,154	-		GFF1843	0.80	+0.0
1,868,165	+		GFF1843	0.81	-1.2
1,868,170	-		GFF1843	0.81	-0.0
1,868,175	-		GFF1843	0.81	+0.2
1,868,175	-		GFF1843	0.81	+0.3
1,868,183	+		GFF1843	0.82	-1.6
1,868,251	+		GFF1843	0.87	-2.4
1,868,251	+		GFF1843	0.87	-1.3
1,868,251	+		GFF1843	0.87	-1.2
1,868,251	+		GFF1843	0.87	-1.4
1,868,253	+		GFF1843	0.87	+0.2
1,868,254	-		GFF1843	0.87	-0.5
1,868,254	-		GFF1843	0.87	-1.1
1,868,268	+		GFF1843	0.88	-3.0
1,868,279	+		GFF1843	0.89	-0.4
1,868,287	-				-2.9
1,868,287	-				-0.6
1,868,289	-				+0.1
1,868,310	-				+1.2
1,868,314	-				-2.5
1,868,386	-				+1.3
1,868,400	-				-1.5
1,868,402	+				-0.1
1,868,435	+				+0.4
1,868,443	-				+0.2
1,868,458	-				-0.3
1,868,479	-				-2.4
1,868,505	-				-1.1
1,868,514	+				-1.2
1,868,514	+				+0.6
1,868,514	+				-0.5
1,868,514	+				+0.4
1,868,522	-				+0.4
1,868,524	+				-1.7
1,868,524	+				-0.4
1,868,524	+				-0.5
1,868,524	+				+0.2
1,868,532	-				-0.4
1,868,532	-				-0.0
1,868,532	-				-0.8
1,868,532	-				-0.1
1,868,532	-				+0.5
1,868,570	+				-0.3
1,868,570	+				-0.4
1,868,570	+				-1.9
1,868,570	+				+0.1
1,868,570	+				+1.1
1,868,570	+				-0.1
1,868,570	+				-0.0
1,868,578	-				+0.8
1,868,578	-				-1.4
1,868,578	-				-0.9
1,868,630	+		GFF1844	0.10	+0.6
1,868,641	+		GFF1844	0.11	-3.5
1,868,689	-		GFF1844	0.16	+0.8
1,868,694	-		GFF1844	0.17	-2.0
1,868,700	-		GFF1844	0.17	-0.8
1,868,708	+		GFF1844	0.18	-0.1
1,868,714	+		GFF1844	0.19	+0.4
1,868,714	+		GFF1844	0.19	-1.6
1,868,714	-		GFF1844	0.19	+0.4
1,868,716	+		GFF1844	0.19	+0.4
1,868,748	+		GFF1844	0.22	-0.6
1,868,750	-		GFF1844	0.22	+0.1
1,868,756	-		GFF1844	0.23	-0.5
1,868,757	+		GFF1844	0.23	-0.8
1,868,757	+		GFF1844	0.23	-0.4
1,868,757	+		GFF1844	0.23	+0.5
1,868,767	+		GFF1844	0.24	+0.1
1,868,767	+		GFF1844	0.24	+1.2
1,868,775	-		GFF1844	0.25	+0.1
1,868,775	-		GFF1844	0.25	-0.4
1,868,780	-		GFF1844	0.25	-1.4
1,868,790	-		GFF1844	0.26	-0.4
1,868,797	+		GFF1844	0.27	-0.2
1,868,797	+		GFF1844	0.27	-0.9
1,868,807	+		GFF1844	0.28	-0.8
1,868,828	+		GFF1844	0.30	+0.6
1,868,828	+		GFF1844	0.30	-1.8
1,868,833	+		GFF1844	0.30	-2.0
1,868,836	-		GFF1844	0.31	-0.2
1,868,841	-		GFF1844	0.31	-1.2
1,868,841	-		GFF1844	0.31	+1.8
1,868,841	-		GFF1844	0.31	-2.4
1,868,943	-		GFF1844	0.41	+0.3
1,868,943	-		GFF1844	0.41	+0.1
1,868,948	-		GFF1844	0.42	+0.3
1,868,963	+		GFF1844	0.43	+0.4
1,868,966	+		GFF1844	0.44	-1.7
1,868,968	+		GFF1844	0.44	+0.1
1,868,969	-		GFF1844	0.44	-2.1
1,868,974	-		GFF1844	0.45	-1.4
1,869,018	+		GFF1844	0.49	+0.4
1,869,026	-		GFF1844	0.50	+0.4
1,869,026	-		GFF1844	0.50	-1.3
1,869,026	-		GFF1844	0.50	+0.5
1,869,026	-		GFF1844	0.50	-0.3
1,869,036	+		GFF1844	0.51	+0.1
1,869,036	+		GFF1844	0.51	-2.0
1,869,036	+		GFF1844	0.51	-1.8
1,869,036	+		GFF1844	0.51	+0.5
1,869,036	+		GFF1844	0.51	+0.2
1,869,036	+		GFF1844	0.51	-2.6
1,869,044	-		GFF1844	0.51	+0.0
1,869,044	-		GFF1844	0.51	-0.6
1,869,044	-		GFF1844	0.51	+0.6
1,869,044	-		GFF1844	0.51	-0.0
1,869,044	-		GFF1844	0.51	-2.2
1,869,044	-		GFF1844	0.51	-0.2
1,869,044	-		GFF1844	0.51	+1.0
1,869,044	-		GFF1844	0.51	-0.2
1,869,044	-		GFF1844	0.51	-1.8
1,869,044	-		GFF1844	0.51	-0.9
1,869,044	-		GFF1844	0.51	-0.6
1,869,046	+		GFF1844	0.52	-1.7
1,869,046	-		GFF1844	0.52	-0.3
1,869,055	+		GFF1844	0.53	-2.0
1,869,062	+		GFF1844	0.53	-0.4
1,869,063	+		GFF1844	0.53	+1.5
1,869,063	-		GFF1844	0.53	-0.0
1,869,068	+		GFF1844	0.54	-3.2
1,869,068	+		GFF1844	0.54	-0.0
1,869,081	-		GFF1844	0.55	+0.2
1,869,081	-		GFF1844	0.55	+0.2
1,869,084	+		GFF1844	0.55	-1.4
1,869,090	-		GFF1844	0.56	-0.2
1,869,096	-		GFF1844	0.57	+0.5
1,869,098	+		GFF1844	0.57	+0.9
1,869,135	-		GFF1844	0.61	-1.5
1,869,146	+		GFF1844	0.62	-0.2
1,869,146	+		GFF1844	0.62	+1.8
1,869,146	+		GFF1844	0.62	-0.3
1,869,146	+		GFF1844	0.62	+0.1
1,869,146	+		GFF1844	0.62	+1.0
1,869,146	+		GFF1844	0.62	-0.2
1,869,146	+		GFF1844	0.62	-1.8
1,869,148	-		GFF1844	0.62	-1.4
1,869,154	-		GFF1844	0.62	-1.3
1,869,154	-		GFF1844	0.62	+0.5
1,869,154	-		GFF1844	0.62	-0.0
1,869,154	-		GFF1844	0.62	-1.4
1,869,154	-		GFF1844	0.62	-0.7
1,869,180	+		GFF1844	0.65	-0.4
1,869,182	-		GFF1844	0.65	+0.4
1,869,202	+		GFF1844	0.67	-0.2
1,869,205	-		GFF1844	0.68	-0.7
1,869,242	+		GFF1844	0.71	+0.1
1,869,250	-		GFF1844	0.72	+0.8
1,869,331	+		GFF1844	0.80	+1.4
1,869,336	+		GFF1844	0.81	-1.2
1,869,336	+		GFF1844	0.81	-0.3
1,869,339	-		GFF1844	0.81	-0.5
1,869,363	+		GFF1844	0.83	-0.0
1,869,382	+		GFF1844	0.85	+1.1
1,869,382	+		GFF1844	0.85	-0.2
1,869,382	+		GFF1844	0.85	-0.8
1,869,382	+		GFF1844	0.85	-0.9
1,869,382	+		GFF1844	0.85	-0.3
1,869,382	+		GFF1844	0.85	+1.8
1,869,384	-		GFF1844	0.85	+0.2
1,869,390	-		GFF1844	0.86	+0.4
1,869,390	-		GFF1844	0.86	-1.1
1,869,390	-		GFF1844	0.86	-1.0
1,869,390	-		GFF1844	0.86	-0.2
1,869,390	-		GFF1844	0.86	+0.8
1,869,393	+		GFF1844	0.86	+0.5
1,869,417	+		GFF1844	0.89	-0.9
1,869,428	+		GFF1844	0.90	-0.5
1,869,428	+		GFF1844	0.90	-1.8
1,869,428	+		GFF1844	0.90	-0.1
1,869,429	-				+0.8
1,869,429	-				-2.2
1,869,431	-				-2.4
1,869,436	-				-0.6
1,869,437	+				-2.0
1,869,444	+				+1.5
1,869,463	+				+0.4
1,869,471	-				+0.6
1,869,474	+				+0.6
1,869,482	-				-0.2
1,869,495	-				-0.3
1,869,507	+				-0.3
1,869,508	+				-2.6
1,869,521	-				+0.3
1,869,533	-				+0.9
1,869,540	+				+0.4
1,869,548	-				+0.9
1,869,548	-				+0.4
1,869,555	+		GFF1845	0.11	+0.4
1,869,555	+		GFF1845	0.11	+1.0
1,869,560	+		GFF1845	0.12	-1.2
1,869,568	+		GFF1845	0.13	-2.2
1,869,568	+		GFF1845	0.13	-1.2
1,869,568	+		GFF1845	0.13	+0.3
1,869,576	-		GFF1845	0.14	-0.5
1,869,576	-		GFF1845	0.14	-0.0
1,869,576	-		GFF1845	0.14	+0.2
1,869,576	-		GFF1845	0.14	+1.7
1,869,576	-		GFF1845	0.14	-0.2
1,869,576	-		GFF1845	0.14	+1.1
1,869,576	-		GFF1845	0.14	-0.7
1,869,576	-		GFF1845	0.14	-1.5
1,869,578	+		GFF1845	0.15	-1.1
1,869,586	-		GFF1845	0.16	-0.4
1,869,586	-		GFF1845	0.16	-1.6
1,869,593	-		GFF1845	0.17	-2.5
1,869,597	+		GFF1845	0.18	-1.9
1,869,597	+		GFF1845	0.18	-0.1
1,869,597	+		GFF1845	0.18	-0.3
1,869,605	-		GFF1845	0.19	-0.2
1,869,612	+		GFF1845	0.20	+0.8
1,869,627	-		GFF1845	0.23	+0.0
1,869,628	+		GFF1845	0.23	+0.0
1,869,637	-		GFF1845	0.25	-0.3
1,869,647	-		GFF1845	0.26	-0.8
1,869,651	+		GFF1845	0.27	+0.9
1,869,685	+		GFF1845	0.33	-2.0
1,869,695	+		GFF1845	0.34	+1.1
1,869,695	+		GFF1845	0.34	+0.7
1,869,695	+		GFF1845	0.34	-0.0
1,869,695	+		GFF1845	0.34	+0.3
1,869,695	+		GFF1845	0.34	-0.7
1,869,695	+		GFF1845	0.34	-0.9
1,869,703	-		GFF1845	0.36	+0.8
1,869,703	-		GFF1845	0.36	+0.7
1,869,703	-		GFF1845	0.36	+0.6
1,869,703	-		GFF1845	0.36	+0.1
1,869,703	-		GFF1845	0.36	-0.1
1,869,703	-		GFF1845	0.36	+0.6
1,869,703	-		GFF1845	0.36	+0.2
1,869,703	-		GFF1845	0.36	-1.6
1,869,703	-		GFF1845	0.36	-1.0
1,869,703	-		GFF1845	0.36	-1.4
1,869,703	-		GFF1845	0.36	-0.1
1,869,703	-		GFF1845	0.36	-0.4
1,869,703	-		GFF1845	0.36	-0.6
1,869,703	-		GFF1845	0.36	+0.8
1,869,703	-		GFF1845	0.36	+0.3
1,869,703	-		GFF1845	0.36	-0.5
1,869,703	-		GFF1845	0.36	-1.7
1,869,703	-		GFF1845	0.36	+0.7
1,869,705	-		GFF1845	0.36	-0.5
1,869,719	-		GFF1845	0.38	+0.8
1,869,719	-		GFF1845	0.38	+1.3
1,869,738	+		GFF1845	0.41	-2.7
1,869,746	-		GFF1845	0.43	+0.3
1,869,746	-		GFF1845	0.43	-0.6
1,869,750	+		GFF1845	0.43	-0.2
1,869,758	-		GFF1845	0.45	-0.3
1,869,758	-		GFF1845	0.45	+0.1
1,869,766	-		GFF1845	0.46	-0.9
1,869,776	-		GFF1845	0.48	-0.4
1,869,796	-		GFF1845	0.51	-1.2
1,869,832	-		GFF1845	0.57	+0.1
1,869,869	+		GFF1845	0.63	-2.2
1,869,880	+		GFF1845	0.65	-0.6
1,869,888	-		GFF1845	0.67	-0.9
1,869,889	+		GFF1845	0.67	-1.3
1,869,897	-		GFF1845	0.68	+0.8
1,869,921	-		GFF1845	0.72	-1.8
1,869,929	+		GFF1845	0.73	-0.8
1,869,936	+		GFF1845	0.74	+0.2
1,869,942	+		GFF1845	0.76	-2.0
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