Strain Fitness in Sphingobium sp. HT1-2 around GFF1837

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,856,945	+		GFF1836	0.67	+0.1
1,856,945	+		GFF1836	0.67	+0.1
1,856,953	-		GFF1836	0.67	+0.8
1,856,953	-		GFF1836	0.67	-1.5
1,856,969	+		GFF1836	0.68	-0.8
1,856,974	+		GFF1836	0.68	+0.6
1,856,977	-		GFF1836	0.68	-0.5
1,856,992	-		GFF1836	0.69	-1.3
1,856,993	+		GFF1836	0.69	-0.4
1,856,993	+		GFF1836	0.69	-0.6
1,856,993	+		GFF1836	0.69	-1.6
1,857,001	-		GFF1836	0.69	-0.9
1,857,001	-		GFF1836	0.69	+0.2
1,857,001	-		GFF1836	0.69	+0.6
1,857,001	-		GFF1836	0.69	-1.3
1,857,007	-		GFF1836	0.69	-0.7
1,857,013	+		GFF1836	0.69	-0.7
1,857,013	+		GFF1836	0.69	-0.4
1,857,021	-		GFF1836	0.70	-1.6
1,857,021	-		GFF1836	0.70	-2.2
1,857,021	-		GFF1836	0.70	+0.2
1,857,021	-		GFF1836	0.70	-0.3
1,857,045	+		GFF1836	0.70	+0.8
1,857,045	-		GFF1836	0.70	+0.5
1,857,092	+		GFF1836	0.72	-1.1
1,857,092	+		GFF1836	0.72	+0.1
1,857,092	+		GFF1836	0.72	-0.2
1,857,096	-		GFF1836	0.72	+1.0
1,857,100	-		GFF1836	0.72	+0.5
1,857,149	-		GFF1836	0.74	-1.4
1,857,151	+		GFF1836	0.74	-1.2
1,857,151	+		GFF1836	0.74	+0.6
1,857,151	+		GFF1836	0.74	+0.8
1,857,151	+		GFF1836	0.74	-0.3
1,857,151	+		GFF1836	0.74	-0.2
1,857,151	+		GFF1836	0.74	-1.3
1,857,159	-		GFF1836	0.74	+0.6
1,857,159	-		GFF1836	0.74	-0.8
1,857,159	-		GFF1836	0.74	-0.6
1,857,159	-		GFF1836	0.74	+1.4
1,857,162	+		GFF1836	0.74	+1.6
1,857,165	+		GFF1836	0.74	+0.5
1,857,167	+		GFF1836	0.75	-3.0
1,857,180	-		GFF1836	0.75	-0.7
1,857,190	+		GFF1836	0.75	-2.5
1,857,196	+		GFF1836	0.75	-1.4
1,857,199	-		GFF1836	0.76	+0.6
1,857,226	-		GFF1836	0.76	-1.7
1,857,234	-		GFF1836	0.77	-1.1
1,857,234	-		GFF1836	0.77	-1.5
1,857,234	-		GFF1836	0.77	-0.6
1,857,235	+		GFF1836	0.77	+0.8
1,857,236	-		GFF1836	0.77	-0.9
1,857,257	-		GFF1836	0.77	-1.3
1,857,269	+		GFF1836	0.78	+0.1
1,857,284	-		GFF1836	0.78	-0.9
1,857,311	-		GFF1836	0.79	-0.7
1,857,322	-		GFF1836	0.80	-0.2
1,857,352	-		GFF1836	0.81	+0.2
1,857,352	-		GFF1836	0.81	+1.4
1,857,352	-		GFF1836	0.81	-0.7
1,857,360	-		GFF1836	0.81	+0.3
1,857,366	+		GFF1836	0.81	-0.3
1,857,366	+		GFF1836	0.81	-1.5
1,857,366	+		GFF1836	0.81	+0.8
1,857,366	+		GFF1836	0.81	-0.2
1,857,374	-		GFF1836	0.81	-1.2
1,857,374	-		GFF1836	0.81	+0.6
1,857,374	-		GFF1836	0.81	-0.5
1,857,374	-		GFF1836	0.81	-0.5
1,857,374	-		GFF1836	0.81	-2.4
1,857,382	-		GFF1836	0.82	-0.2
1,857,383	+		GFF1836	0.82	+0.5
1,857,383	+		GFF1836	0.82	-0.7
1,857,385	+		GFF1836	0.82	+0.1
1,857,391	-		GFF1836	0.82	-2.7
1,857,391	-		GFF1836	0.82	-1.7
1,857,391	-		GFF1836	0.82	-0.6
1,857,396	-		GFF1836	0.82	-0.8
1,857,413	+		GFF1836	0.83	+0.1
1,857,414	-		GFF1836	0.83	+1.0
1,857,416	-		GFF1836	0.83	-1.0
1,857,455	-		GFF1836	0.84	-2.6
1,857,457	+		GFF1836	0.84	-0.7
1,857,462	+		GFF1836	0.84	+0.3
1,857,473	+		GFF1836	0.85	-0.1
1,857,473	+		GFF1836	0.85	-0.2
1,857,473	+		GFF1836	0.85	+1.2
1,857,476	-		GFF1836	0.85	-0.4
1,857,476	-		GFF1836	0.85	-0.1
1,857,483	+		GFF1836	0.85	+1.4
1,857,501	+		GFF1836	0.86	-0.6
1,857,509	-		GFF1836	0.86	+0.4
1,857,528	-		GFF1836	0.86	+0.8
1,857,582	-		GFF1836	0.88	-0.1
1,857,588	+		GFF1836	0.88	-1.5
1,857,591	-		GFF1836	0.88	+0.5
1,857,596	-		GFF1836	0.89	-0.5
1,857,606	+		GFF1836	0.89	-0.6
1,857,606	+		GFF1836	0.89	-1.3
1,857,606	+		GFF1836	0.89	+0.1
1,857,606	+		GFF1836	0.89	-0.7
1,857,606	+		GFF1836	0.89	-0.7
1,857,606	+		GFF1836	0.89	-0.0
1,857,606	+		GFF1836	0.89	-0.8
1,857,606	+		GFF1836	0.89	-2.2
1,857,606	+		GFF1836	0.89	+0.6
1,857,614	-		GFF1836	0.89	+0.2
1,857,614	-		GFF1836	0.89	-2.4
1,857,614	-		GFF1836	0.89	+0.4
1,857,614	-		GFF1836	0.89	-2.0
1,857,614	-		GFF1836	0.89	+0.4
1,857,614	-		GFF1836	0.89	-1.8
1,857,614	-		GFF1836	0.89	-0.8
1,857,614	-		GFF1836	0.89	-0.0
1,857,614	-		GFF1836	0.89	-0.5
1,857,614	-		GFF1836	0.89	+0.0
1,857,621	+		GFF1836	0.89	+0.2
1,857,624	+		GFF1836	0.90	-0.3
1,857,629	+		GFF1836	0.90	-0.2
1,857,632	-		GFF1836	0.90	-0.3
1,857,632	-		GFF1836	0.90	+0.7
1,857,632	-		GFF1836	0.90	+1.0
1,857,651	-				-0.2
1,857,677	+				-0.5
1,857,677	+				-1.2
1,857,681	-				+1.2
1,857,682	+				-1.5
1,857,695	-				-1.1
1,857,705	+				+0.5
1,857,708	+				+1.0
1,857,729	-				-0.0
1,857,767	+				-1.1
1,857,771	-				-1.8
1,857,775	-				+0.8
1,857,775	-				+1.6
1,857,777	+				-0.6
1,857,777	+				-0.5
1,857,777	+				-1.3
1,857,777	+				-1.3
1,857,777	+				-1.7
1,857,785	-				-1.2
1,857,785	-				+0.0
1,857,790	-				-0.8
1,857,795	-				+0.3
1,857,811	+				-0.5
1,857,824	-				-1.3
1,857,834	+				-0.9
1,857,843	+				-0.5
1,857,865	+				-0.8
1,857,868	-				-0.9
1,857,868	-				-0.0
1,857,868	-				-0.7
1,857,873	-				-0.2
1,857,873	-				+0.0
1,857,887	+				+1.2
1,857,895	-				-1.5
1,857,899	-				-0.3
1,857,921	-				-1.2
1,857,976	-				-1.1
1,858,007	-				-0.6
1,858,007	-				-0.4
1,858,013	-				-0.6
1,858,013	-				+0.7
1,858,017	-				+0.1
1,858,039	+				-0.0
1,858,044	+				-0.5
1,858,050	+				+0.7
1,858,067	+		GFF1837	0.11	-0.7
1,858,072	+		GFF1837	0.11	+0.5
1,858,072	+		GFF1837	0.11	-0.0
1,858,075	-		GFF1837	0.11	-0.2
1,858,077	+		GFF1837	0.12	+0.2
1,858,077	+		GFF1837	0.12	-0.3
1,858,077	+		GFF1837	0.12	-0.9
1,858,080	-		GFF1837	0.12	-0.0
1,858,080	-		GFF1837	0.12	+1.6
1,858,080	-		GFF1837	0.12	+0.3
1,858,080	-		GFF1837	0.12	+0.4
1,858,085	-		GFF1837	0.12	-0.3
1,858,085	-		GFF1837	0.12	-1.4
1,858,085	-		GFF1837	0.12	+0.9
1,858,085	-		GFF1837	0.12	-0.0
1,858,085	-		GFF1837	0.12	-0.3
1,858,085	-		GFF1837	0.12	-0.3
1,858,085	-		GFF1837	0.12	-0.9
1,858,085	-		GFF1837	0.12	-1.1
1,858,085	-		GFF1837	0.12	-0.4
1,858,090	-		GFF1837	0.13	-0.2
1,858,090	-		GFF1837	0.13	-0.4
1,858,090	-		GFF1837	0.13	-0.4
1,858,091	+		GFF1837	0.13	+1.0
1,858,099	-		GFF1837	0.13	+0.1
1,858,101	+		GFF1837	0.14	+0.2
1,858,101	+		GFF1837	0.14	+0.8
1,858,109	-		GFF1837	0.14	+0.8
1,858,109	-		GFF1837	0.14	-0.3
1,858,109	-		GFF1837	0.14	+0.8
1,858,109	-		GFF1837	0.14	-0.0
1,858,164	+		GFF1837	0.19	+0.9
1,858,171	-		GFF1837	0.20	-2.2
1,858,199	+		GFF1837	0.22	-0.2
1,858,206	-		GFF1837	0.23	+0.8
1,858,216	+		GFF1837	0.23	-0.3
1,858,216	+		GFF1837	0.23	-1.7
1,858,216	+		GFF1837	0.23	-0.1
1,858,216	+		GFF1837	0.23	+0.5
1,858,224	-		GFF1837	0.24	+0.2
1,858,224	-		GFF1837	0.24	-0.3
1,858,244	+		GFF1837	0.26	+0.2
1,858,248	+		GFF1837	0.26	-0.1
1,858,250	+		GFF1837	0.26	-0.2
1,858,251	-		GFF1837	0.26	-1.7
1,858,255	+		GFF1837	0.27	+0.7
1,858,269	+		GFF1837	0.28	-1.7
1,858,304	+		GFF1837	0.31	-0.3
1,858,314	-		GFF1837	0.32	-0.6
1,858,319	-		GFF1837	0.32	-1.9
1,858,335	+		GFF1837	0.34	-1.6
1,858,339	-		GFF1837	0.34	-0.5
1,858,354	+		GFF1837	0.35	-0.5
1,858,359	+		GFF1837	0.36	-0.6
1,858,362	-		GFF1837	0.36	+0.2
1,858,362	-		GFF1837	0.36	-0.4
1,858,367	+		GFF1837	0.36	+1.2
1,858,372	-		GFF1837	0.37	-0.2
1,858,375	-		GFF1837	0.37	+1.1
1,858,388	-		GFF1837	0.38	-1.0
1,858,410	+		GFF1837	0.40	+0.4
1,858,418	-		GFF1837	0.41	+0.6
1,858,425	+		GFF1837	0.41	-0.1
1,858,425	+		GFF1837	0.41	-0.3
1,858,425	+		GFF1837	0.41	-0.6
1,858,431	+		GFF1837	0.42	-1.2
1,858,433	-		GFF1837	0.42	+0.6
1,858,433	-		GFF1837	0.42	-0.8
1,858,439	-		GFF1837	0.43	-1.9
1,858,456	+		GFF1837	0.44	+0.5
1,858,473	-		GFF1837	0.46	+0.5
1,858,476	+		GFF1837	0.46	+0.5
1,858,482	+		GFF1837	0.46	+0.5
1,858,484	-		GFF1837	0.46	-0.8
1,858,490	-		GFF1837	0.47	+0.7
1,858,490	-		GFF1837	0.47	+0.3
1,858,497	+		GFF1837	0.48	-0.8
1,858,502	+		GFF1837	0.48	+0.0
1,858,505	-		GFF1837	0.48	+1.4
1,858,524	+		GFF1837	0.50	-2.0
1,858,532	-		GFF1837	0.51	-1.3
1,858,532	-		GFF1837	0.51	+1.2
1,858,532	-		GFF1837	0.51	+0.6
1,858,540	+		GFF1837	0.51	-0.7
1,858,551	+		GFF1837	0.52	-1.6
1,858,559	-		GFF1837	0.53	-0.1
1,858,564	+		GFF1837	0.53	+0.6
1,858,569	+		GFF1837	0.54	-1.6
1,858,569	+		GFF1837	0.54	+0.1
1,858,576	-		GFF1837	0.54	-0.3
1,858,577	-		GFF1837	0.54	-0.2
1,858,577	-		GFF1837	0.54	-0.9
1,858,577	-		GFF1837	0.54	-0.3
1,858,577	-		GFF1837	0.54	+0.1
1,858,577	-		GFF1837	0.54	-1.3
1,858,577	-		GFF1837	0.54	-0.4
1,858,584	+		GFF1837	0.55	-1.1
1,858,591	+		GFF1837	0.56	+0.4
1,858,599	-		GFF1837	0.56	-0.6
1,858,616	+		GFF1837	0.58	+0.4
1,858,618	+		GFF1837	0.58	+1.2
1,858,624	-		GFF1837	0.59	+0.2
1,858,624	-		GFF1837	0.59	+1.6
1,858,631	+		GFF1837	0.59	-1.5
1,858,644	-		GFF1837	0.60	-0.2
1,858,644	-		GFF1837	0.60	-1.8
1,858,644	-		GFF1837	0.60	+0.0
1,858,645	-		GFF1837	0.60	+0.2
1,858,650	-		GFF1837	0.61	+1.4
1,858,690	+		GFF1837	0.64	+0.3
1,858,697	+		GFF1837	0.65	+0.2
1,858,698	-		GFF1837	0.65	-1.8
1,858,698	-		GFF1837	0.65	-1.4
1,858,698	-		GFF1837	0.65	-2.0
1,858,736	+		GFF1837	0.68	+0.2
1,858,740	+		GFF1837	0.68	-0.3
1,858,748	-		GFF1837	0.69	+1.4
1,858,748	-		GFF1837	0.69	+0.3
1,858,748	-		GFF1837	0.69	-0.4
1,858,748	-		GFF1837	0.69	-0.7
1,858,764	+		GFF1837	0.71	-0.5
1,858,799	+		GFF1837	0.74	-0.5
1,858,805	-		GFF1837	0.74	-0.4
1,858,807	-		GFF1837	0.74	+0.6
1,858,807	-		GFF1837	0.74	+0.2
1,858,807	-		GFF1837	0.74	+1.1
1,858,824	-		GFF1837	0.76	-0.4
1,858,824	-		GFF1837	0.76	-0.4
1,858,824	-		GFF1837	0.76	+0.5
1,858,870	-		GFF1837	0.80	+0.6
1,858,885	+		GFF1837	0.81	-2.1
1,858,885	+		GFF1837	0.81	-0.0
1,858,903	-		GFF1837	0.82	-1.3
1,858,919	-		GFF1837	0.84	-0.4
1,858,934	+		GFF1837	0.85	+0.9
1,858,935	-		GFF1837	0.85	-0.0
1,858,935	-		GFF1837	0.85	-0.4
1,858,937	+		GFF1837	0.85	+0.6
1,858,944	+		GFF1837	0.86	-0.9
1,858,944	+		GFF1837	0.86	+0.3
1,858,944	+		GFF1837	0.86	-1.6
1,858,944	+		GFF1837	0.86	+0.5
1,858,952	-		GFF1837	0.87	-0.2
1,858,952	-		GFF1837	0.87	-0.5
1,858,952	-		GFF1837	0.87	-1.7
1,858,952	-		GFF1837	0.87	+0.5
1,858,952	-		GFF1837	0.87	+0.4
1,858,952	-		GFF1837	0.87	-0.4
1,858,952	-		GFF1837	0.87	-0.7
1,858,952	-		GFF1837	0.87	-0.7
1,858,964	+		GFF1837	0.88	-1.2
1,858,964	+		GFF1837	0.88	-1.2
1,858,967	+		GFF1837	0.88	-0.8
1,858,969	+		GFF1837	0.88	+0.7
1,858,975	-		GFF1837	0.89	-2.1
1,858,977	+		GFF1837	0.89	-1.2
1,858,997	-				+1.0
1,858,998	+				-0.5
1,859,004	+				+1.0
1,859,012	-				+0.8
1,859,012	-				-0.2
1,859,023	+				+0.8
1,859,031	-				-0.9
1,859,093	+				-1.3
1,859,093	+				+0.7
1,859,101	-				-0.9
1,859,101	-				+1.1
1,859,108	+				-0.0
1,859,148	+				-1.3
1,859,158	+				-1.8
1,859,166	-				-0.6
1,859,166	-				+1.1
1,859,166	-				-0.3
1,859,166	-				-0.3
1,859,177	+				+0.3
1,859,185	-				+0.4
1,859,186	-				-1.4
1,859,196	+				-1.7
1,859,219	+				-2.0
1,859,232	-		GFF1838	0.11	+0.7
1,859,232	-		GFF1838	0.11	-0.4
1,859,255	-		GFF1838	0.13	+0.3
1,859,325	+		GFF1838	0.20	+0.3
1,859,342	+		GFF1838	0.21	+0.4
1,859,352	+		GFF1838	0.22	+0.3
1,859,397	+		GFF1838	0.27	+0.9
1,859,416	-		GFF1838	0.29	-1.5
1,859,421	-		GFF1838	0.29	+0.0
1,859,451	+		GFF1838	0.32	+1.0
1,859,451	-		GFF1838	0.32	+0.1
1,859,459	-		GFF1838	0.33	-0.3
1,859,508	-		GFF1838	0.37	+0.6
1,859,517	+		GFF1838	0.38	+0.6
1,859,517	+		GFF1838	0.38	+0.4
1,859,517	+		GFF1838	0.38	-0.9
1,859,517	+		GFF1838	0.38	+0.5
1,859,517	+		GFF1838	0.38	-2.6
1,859,517	+		GFF1838	0.38	-0.5
1,859,517	+		GFF1838	0.38	+0.5
1,859,517	+		GFF1838	0.38	-0.4
1,859,517	+		GFF1838	0.38	+0.2
1,859,517	+		GFF1838	0.38	-0.3
1,859,517	+		GFF1838	0.38	+0.5
1,859,519	+		GFF1838	0.39	-0.2
1,859,522	+		GFF1838	0.39	-0.1
1,859,525	-		GFF1838	0.39	-1.2
1,859,525	-		GFF1838	0.39	-0.6
1,859,525	-		GFF1838	0.39	+0.1
1,859,525	-		GFF1838	0.39	-0.0
1,859,525	-		GFF1838	0.39	-1.5
1,859,563	+		GFF1838	0.43	-0.6
1,859,572	+		GFF1838	0.44	+0.2
1,859,575	-		GFF1838	0.44	-0.5
1,859,603	-		GFF1838	0.47	+1.1
1,859,635	-		GFF1838	0.50	+0.2
1,859,653	-		GFF1838	0.51	+0.3
1,859,717	-		GFF1838	0.58	-0.4
1,859,718	+		GFF1838	0.58	-0.5
1,859,718	+		GFF1838	0.58	+0.8
1,859,722	-		GFF1838	0.58	-1.1
1,859,752	+		GFF1838	0.61	-1.3
1,859,760	-		GFF1838	0.62	+0.6
1,859,761	+		GFF1838	0.62	-0.8
1,859,761	+		GFF1838	0.62	-1.5
1,859,769	-		GFF1838	0.63	-1.4
1,859,785	+		GFF1838	0.64	-1.3
1,859,793	-		GFF1838	0.65	-0.1
1,859,799	+		GFF1838	0.66	-0.7
1,859,815	-		GFF1838	0.67	-0.8
1,859,851	+		GFF1838	0.71	-1.6
1,859,854	+		GFF1838	0.71	-0.6
1,859,863	+		GFF1838	0.72	+0.2
1,859,863	+		GFF1838	0.72	+0.3
1,859,863	-		GFF1838	0.72	-0.3
1,859,864	-		GFF1838	0.72	-0.2
1,859,869	+		GFF1838	0.72	+1.3
1,859,872	-		GFF1838	0.73	-0.0
1,859,887	+		GFF1838	0.74	-0.1
1,859,901	-		GFF1838	0.75	-0.1
1,859,906	-		GFF1838	0.76	-0.5
1,859,914	-		GFF1838	0.77	+0.4
1,859,922	-		GFF1838	0.77	-1.5
1,859,924	+		GFF1838	0.78	+1.2
1,859,935	-		GFF1838	0.79	+0.7
1,859,939	+		GFF1838	0.79	-0.7
1,859,947	-		GFF1838	0.80	-0.2
1,859,950	+		GFF1838	0.80	-1.5
1,859,958	-		GFF1838	0.81	+0.3
1,859,980	-		GFF1838	0.83	-1.6
1,859,980	-		GFF1838	0.83	-0.3
1,859,982	+		GFF1838	0.83	-0.5
1,859,982	-		GFF1838	0.83	-0.6
1,859,982	-		GFF1838	0.83	+0.1
1,859,990	-		GFF1838	0.84	-1.2
1,859,990	-		GFF1838	0.84	-0.3
1,859,990	-		GFF1838	0.84	+0.6
1,859,990	-		GFF1838	0.84	+0.5
1,859,990	-		GFF1838	0.84	-1.3
1,859,992	+		GFF1838	0.84	+0.6
1,859,992	-		GFF1838	0.84	+0.0
1,859,994	-		GFF1838	0.84	+0.4
1,860,000	-		GFF1838	0.85	-1.2
1,860,000	-		GFF1838	0.85	-0.7
1,860,000	-		GFF1838	0.85	+0.5
1,860,000	-		GFF1838	0.85	-0.4
1,860,000	-		GFF1838	0.85	-0.0
1,860,004	+		GFF1838	0.85	+0.5
1,860,010	+		GFF1838	0.86	-1.3
1,860,048	+		GFF1838	0.90	-0.2
1,860,048	+		GFF1838	0.90	-0.0
1,860,048	+		GFF1838	0.90	+0.4
1,860,068	+				+0.2
1,860,068	+				+0.4
1,860,073	+				-1.4
1,860,073	+				+0.2
1,860,073	+				+0.5
1,860,073	+				-0.9
1,860,081	-				+0.2
1,860,081	-				-0.2