Strain Fitness in Sphingobium sp. HT1-2 around GFF1572

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,598,417	+		GFF1571	0.21	-0.4
1,598,417	+		GFF1571	0.21	-1.9
1,598,417	+		GFF1571	0.21	-0.9
1,598,417	+		GFF1571	0.21	+0.5
1,598,425	-		GFF1571	0.21	-2.0
1,598,580	+		GFF1571	0.34	+1.2
1,598,637	+		GFF1571	0.39	+0.2
1,598,641	+		GFF1571	0.39	+0.7
1,598,641	+		GFF1571	0.39	-0.2
1,598,641	+		GFF1571	0.39	+0.2
1,598,684	-		GFF1571	0.42	-0.6
1,598,718	+		GFF1571	0.45	-1.3
1,598,718	+		GFF1571	0.45	+1.2
1,598,718	+		GFF1571	0.45	-0.6
1,598,718	+		GFF1571	0.45	-0.0
1,598,718	+		GFF1571	0.45	+1.6
1,598,718	+		GFF1571	0.45	-0.8
1,598,726	-		GFF1571	0.46	+0.9
1,598,726	-		GFF1571	0.46	-0.9
1,598,726	-		GFF1571	0.46	+0.6
1,598,726	-		GFF1571	0.46	-0.5
1,598,726	-		GFF1571	0.46	+0.4
1,598,726	-		GFF1571	0.46	-0.7
1,598,726	-		GFF1571	0.46	+0.8
1,598,726	-		GFF1571	0.46	+0.0
1,598,726	-		GFF1571	0.46	-1.0
1,598,726	-		GFF1571	0.46	+0.4
1,598,736	-		GFF1571	0.47	+2.1
1,598,809	-		GFF1571	0.52	+0.3
1,598,887	-		GFF1571	0.59	-0.8
1,598,891	-		GFF1571	0.59	-0.7
1,598,900	+		GFF1571	0.60	-0.5
1,598,900	+		GFF1571	0.60	+0.4
1,598,900	+		GFF1571	0.60	-0.2
1,598,908	-		GFF1571	0.60	-1.9
1,598,908	-		GFF1571	0.60	-0.3
1,598,908	-		GFF1571	0.60	+0.7
1,598,908	-		GFF1571	0.60	-1.8
1,598,908	-		GFF1571	0.60	-1.7
1,598,908	-		GFF1571	0.60	+0.3
1,598,916	+		GFF1571	0.61	-1.2
1,598,957	-		GFF1571	0.64	-0.4
1,599,026	+		GFF1571	0.70	+1.6
1,599,059	+		GFF1571	0.73	-0.7
1,599,069	-		GFF1571	0.73	-0.5
1,599,112	+		GFF1571	0.77	+0.4
1,599,112	+		GFF1571	0.77	-0.0
1,599,117	+		GFF1571	0.77	+0.4
1,599,117	+		GFF1571	0.77	-0.8
1,599,117	+		GFF1571	0.77	-0.1
1,599,122	+		GFF1571	0.78	+0.5
1,599,122	+		GFF1571	0.78	-1.0
1,599,122	+		GFF1571	0.78	-0.4
1,599,122	+		GFF1571	0.78	+1.3
1,599,125	-		GFF1571	0.78	+0.7
1,599,130	-		GFF1571	0.78	-0.8
1,599,140	+		GFF1571	0.79	+1.0
1,599,159	+		GFF1571	0.81	-1.6
1,599,183	+		GFF1571	0.83	-1.4
1,599,183	+		GFF1571	0.83	-1.7
1,599,183	+		GFF1571	0.83	-0.5
1,599,191	-		GFF1571	0.83	+0.2
1,599,200	+		GFF1571	0.84	-1.0
1,599,234	+		GFF1571	0.87	+1.1
1,599,234	+		GFF1571	0.87	+1.2
1,599,242	-		GFF1571	0.87	+0.4
1,599,242	-		GFF1571	0.87	-1.1
1,599,269	+		GFF1571	0.89	-0.9
1,599,277	-				-1.2
1,599,369	+				-0.8
1,599,422	+				-0.4
1,599,433	+				-0.4
1,599,468	+				+0.1
1,599,481	+				+0.1
1,599,481	+				+1.1
1,599,481	+				+0.2
1,599,481	+				-0.3
1,599,481	+				+1.9
1,599,481	+				+0.7
1,599,481	+				-1.0
1,599,481	+				+0.3
1,599,481	+				-0.6
1,599,481	+				-1.7
1,599,489	+				+1.2
1,599,489	-				-0.6
1,599,489	-				-2.0
1,599,489	-				+1.1
1,599,489	-				-2.0
1,599,489	-				+0.2
1,599,489	-				+1.1
1,599,489	-				-0.6
1,599,489	-				-0.1
1,599,489	-				-1.6
1,599,498	-				-0.4
1,599,499	-				+1.6
1,599,499	-				+1.0
1,599,499	-				-0.0
1,599,517	+				+0.9
1,599,538	-				+0.9
1,599,538	-				+0.7
1,599,540	-				-0.3
1,599,555	+				-0.5
1,599,563	-				+0.2
1,599,575	+				+0.2
1,599,575	+				+0.3
1,599,595	+				+0.2
1,599,595	+				+0.2
1,599,595	+				-0.8
1,599,601	-				+0.7
1,599,603	-				-1.9
1,599,603	-				+0.3
1,599,603	-				-0.8
1,599,603	-				-1.1
1,599,608	+				-1.8
1,599,608	+				-0.4
1,599,627	+				+0.7
1,599,627	+				-0.0
1,599,627	+				+0.8
1,599,627	+				-2.0
1,599,632	+				-0.8
1,599,635	-				+0.1
1,599,635	-				-1.0
1,599,640	-		GFF1572	0.10	+0.1
1,599,640	-		GFF1572	0.10	-1.0
1,599,642	+		GFF1572	0.10	-0.2
1,599,732	+		GFF1572	0.14	-2.2
1,599,755	+		GFF1572	0.15	+0.3
1,599,801	+		GFF1572	0.17	-1.5
1,599,801	+		GFF1572	0.17	-0.5
1,599,820	-		GFF1572	0.18	+0.2
1,599,822	+		GFF1572	0.18	+0.3
1,599,830	-		GFF1572	0.18	-1.1
1,599,830	-		GFF1572	0.18	-0.6
1,599,830	-		GFF1572	0.18	+1.3
1,599,851	+		GFF1572	0.19	-1.1
1,599,870	-		GFF1572	0.20	-0.4
1,599,913	-		GFF1572	0.22	+1.0
1,599,938	+		GFF1572	0.23	+0.4
1,599,966	+		GFF1572	0.24	-0.4
1,599,981	+		GFF1572	0.24	-0.4
1,600,024	-		GFF1572	0.26	-0.5
1,600,065	-		GFF1572	0.28	-0.4
1,600,084	-		GFF1572	0.29	-0.4
1,600,103	-		GFF1572	0.30	-0.7
1,600,115	-		GFF1572	0.30	+0.9
1,600,120	+		GFF1572	0.30	-0.2
1,600,120	+		GFF1572	0.30	-0.1
1,600,120	+		GFF1572	0.30	+1.1
1,600,120	+		GFF1572	0.30	-0.3
1,600,120	+		GFF1572	0.30	+1.0
1,600,120	+		GFF1572	0.30	-0.4
1,600,120	+		GFF1572	0.30	-0.9
1,600,120	+		GFF1572	0.30	+0.6
1,600,120	+		GFF1572	0.30	-0.8
1,600,120	+		GFF1572	0.30	-0.7
1,600,120	+		GFF1572	0.30	-0.6
1,600,120	+		GFF1572	0.30	-0.7
1,600,120	+		GFF1572	0.30	+0.8
1,600,120	+		GFF1572	0.30	+0.2
1,600,120	+		GFF1572	0.30	-0.9
1,600,120	+		GFF1572	0.30	-1.2
1,600,120	+		GFF1572	0.30	+0.7
1,600,128	-		GFF1572	0.31	-0.5
1,600,128	-		GFF1572	0.31	-1.4
1,600,128	-		GFF1572	0.31	+0.7
1,600,128	-		GFF1572	0.31	-0.8
1,600,128	-		GFF1572	0.31	-2.5
1,600,128	-		GFF1572	0.31	+0.5
1,600,128	-		GFF1572	0.31	-0.5
1,600,128	-		GFF1572	0.31	-0.9
1,600,128	-		GFF1572	0.31	-1.2
1,600,128	-		GFF1572	0.31	+0.7
1,600,128	-		GFF1572	0.31	-0.0
1,600,128	-		GFF1572	0.31	-0.8
1,600,128	-		GFF1572	0.31	-0.6
1,600,128	-		GFF1572	0.31	-2.7
1,600,128	-		GFF1572	0.31	-0.3
1,600,128	-		GFF1572	0.31	-1.1
1,600,130	+		GFF1572	0.31	+0.2
1,600,133	-		GFF1572	0.31	-1.5
1,600,153	+		GFF1572	0.32	-0.2
1,600,165	-		GFF1572	0.32	+1.0
1,600,187	+		GFF1572	0.33	-0.1
1,600,228	+		GFF1572	0.35	-0.5
1,600,228	+		GFF1572	0.35	-0.7
1,600,228	+		GFF1572	0.35	-0.6
1,600,228	+		GFF1572	0.35	-1.2
1,600,228	+		GFF1572	0.35	-2.2
1,600,228	+		GFF1572	0.35	-0.8
1,600,228	+		GFF1572	0.35	+0.1
1,600,228	+		GFF1572	0.35	+0.0
1,600,228	+		GFF1572	0.35	-0.2
1,600,228	+		GFF1572	0.35	-2.8
1,600,228	+		GFF1572	0.35	-0.4
1,600,228	+		GFF1572	0.35	+0.5
1,600,228	+		GFF1572	0.35	+0.0
1,600,228	+		GFF1572	0.35	-2.0
1,600,228	+		GFF1572	0.35	-0.3
1,600,228	+		GFF1572	0.35	+0.6
1,600,228	+		GFF1572	0.35	-1.5
1,600,228	+		GFF1572	0.35	+0.5
1,600,236	-		GFF1572	0.35	+0.8
1,600,236	-		GFF1572	0.35	-0.1
1,600,236	-		GFF1572	0.35	-0.4
1,600,236	-		GFF1572	0.35	+0.6
1,600,236	-		GFF1572	0.35	+0.9
1,600,236	-		GFF1572	0.35	+0.4
1,600,236	-		GFF1572	0.35	-0.4
1,600,236	-		GFF1572	0.35	+0.0
1,600,312	+		GFF1572	0.38	-0.8
1,600,318	-		GFF1572	0.39	+1.0
1,600,330	-		GFF1572	0.39	+0.3
1,600,376	+		GFF1572	0.41	-0.2
1,600,376	+		GFF1572	0.41	+0.8
1,600,391	-		GFF1572	0.42	+0.7
1,600,392	+		GFF1572	0.42	+1.3
1,600,392	+		GFF1572	0.42	-0.8
1,600,392	+		GFF1572	0.42	-0.6
1,600,400	-		GFF1572	0.42	-0.6
1,600,400	-		GFF1572	0.42	-0.9
1,600,440	-		GFF1572	0.44	+0.2
1,600,445	-		GFF1572	0.44	-0.8
1,600,458	-		GFF1572	0.45	-0.1
1,600,504	-		GFF1572	0.46	+0.6
1,600,504	-		GFF1572	0.46	+0.1
1,600,527	-		GFF1572	0.47	+0.4
1,600,566	+		GFF1572	0.49	-0.9
1,600,571	+		GFF1572	0.49	-1.3
1,600,591	-		GFF1572	0.50	+0.0
1,600,625	-		GFF1572	0.52	+0.2
1,600,627	+		GFF1572	0.52	+0.5
1,600,627	+		GFF1572	0.52	-1.1
1,600,627	+		GFF1572	0.52	+0.4
1,600,627	+		GFF1572	0.52	+0.7
1,600,627	+		GFF1572	0.52	+0.2
1,600,627	+		GFF1572	0.52	+0.1
1,600,627	+		GFF1572	0.52	+1.7
1,600,627	+		GFF1572	0.52	-0.8
1,600,627	+		GFF1572	0.52	-0.2
1,600,627	+		GFF1572	0.52	-0.9
1,600,627	+		GFF1572	0.52	+0.1
1,600,635	-		GFF1572	0.52	+0.1
1,600,635	-		GFF1572	0.52	+1.1
1,600,635	-		GFF1572	0.52	-1.5
1,600,635	-		GFF1572	0.52	+0.1
1,600,635	-		GFF1572	0.52	-0.5
1,600,635	-		GFF1572	0.52	-0.4
1,600,635	-		GFF1572	0.52	-0.7
1,600,635	-		GFF1572	0.52	-0.8
1,600,635	-		GFF1572	0.52	+0.7
1,600,635	-		GFF1572	0.52	-1.3
1,600,635	-		GFF1572	0.52	-1.1
1,600,635	-		GFF1572	0.52	+1.1
1,600,635	-		GFF1572	0.52	+0.7
1,600,635	-		GFF1572	0.52	-0.8
1,600,635	-		GFF1572	0.52	+0.2
1,600,635	-		GFF1572	0.52	-0.3
1,600,643	+		GFF1572	0.52	-0.0
1,600,644	+		GFF1572	0.52	-0.3
1,600,647	-		GFF1572	0.52	+0.3
1,600,647	-		GFF1572	0.52	+0.1
1,600,652	-		GFF1572	0.53	-0.7
1,600,667	-		GFF1572	0.53	+0.6
1,600,677	-		GFF1572	0.54	-0.0
1,600,677	-		GFF1572	0.54	-0.1
1,600,684	-		GFF1572	0.54	-1.3
1,600,693	-		GFF1572	0.54	+0.2
1,600,717	-		GFF1572	0.55	-0.6
1,600,737	-		GFF1572	0.56	+0.5
1,600,765	+		GFF1572	0.57	+1.2
1,600,773	-		GFF1572	0.58	-0.1
1,600,775	+		GFF1572	0.58	-0.2
1,600,783	-		GFF1572	0.58	+0.2
1,600,797	-		GFF1572	0.59	+1.0
1,600,803	-		GFF1572	0.59	+0.3
1,600,832	-		GFF1572	0.60	+0.6
1,600,832	-		GFF1572	0.60	-0.7
1,600,832	-		GFF1572	0.60	+1.1
1,600,832	-		GFF1572	0.60	+1.5
1,600,832	-		GFF1572	0.60	+0.8
1,600,832	-		GFF1572	0.60	+0.4
1,600,832	-		GFF1572	0.60	+1.3
1,600,832	-		GFF1572	0.60	+0.5
1,600,832	-		GFF1572	0.60	+0.8
1,600,951	-		GFF1572	0.65	-1.0
1,600,960	+		GFF1572	0.66	+0.3
1,600,962	+		GFF1572	0.66	+1.7
1,600,970	-		GFF1572	0.66	-0.2
1,600,970	-		GFF1572	0.66	-0.3
1,601,028	-		GFF1572	0.68	-0.4
1,601,046	+		GFF1572	0.69	+0.8
1,601,051	+		GFF1572	0.69	+1.1
1,601,059	-		GFF1572	0.70	+0.2
1,601,061	+		GFF1572	0.70	+0.2
1,601,061	+		GFF1572	0.70	+1.4
1,601,069	-		GFF1572	0.70	-0.1
1,601,069	-		GFF1572	0.70	-0.2
1,601,069	-		GFF1572	0.70	-0.4
1,601,069	-		GFF1572	0.70	+0.6
1,601,093	+		GFF1572	0.71	+0.1
1,601,093	+		GFF1572	0.71	-0.6
1,601,101	-		GFF1572	0.72	-1.5
1,601,101	-		GFF1572	0.72	-1.2
1,601,106	+		GFF1572	0.72	-0.9
1,601,118	+		GFF1572	0.72	+1.1
1,601,118	+		GFF1572	0.72	-1.8
1,601,143	+		GFF1572	0.73	+0.4
1,601,151	-		GFF1572	0.74	-1.5
1,601,151	-		GFF1572	0.74	-0.1
1,601,151	-		GFF1572	0.74	-0.5
1,601,153	+		GFF1572	0.74	+1.1
1,601,157	+		GFF1572	0.74	+0.0
1,601,159	+		GFF1572	0.74	+1.1
1,601,161	-		GFF1572	0.74	+1.6
1,601,161	-		GFF1572	0.74	+0.7
1,601,167	+		GFF1572	0.74	-0.2
1,601,167	+		GFF1572	0.74	+0.1
1,601,175	-		GFF1572	0.75	+0.2
1,601,175	-		GFF1572	0.75	-1.7
1,601,175	-		GFF1572	0.75	-1.6
1,601,204	+		GFF1572	0.76	+0.3
1,601,212	-		GFF1572	0.76	+0.0
1,601,241	-		GFF1572	0.77	+0.2
1,601,254	+		GFF1572	0.78	-0.3
1,601,254	+		GFF1572	0.78	-2.7
1,601,254	-		GFF1572	0.78	-0.8
1,601,259	+		GFF1572	0.78	+0.3
1,601,275	-		GFF1572	0.79	+1.4
1,601,287	+		GFF1572	0.79	-0.2
1,601,358	+		GFF1572	0.82	-0.5
1,601,358	+		GFF1572	0.82	-1.2
1,601,366	-		GFF1572	0.83	-0.6
1,601,419	+		GFF1572	0.85	+0.4
1,601,448	+		GFF1572	0.86	-0.8
1,601,448	+		GFF1572	0.86	-0.2
1,601,448	+		GFF1572	0.86	-0.0
1,601,448	+		GFF1572	0.86	+0.1
1,601,448	+		GFF1572	0.86	+0.2
1,601,456	-		GFF1572	0.86	-0.5
1,601,456	-		GFF1572	0.86	+0.8
1,601,456	-		GFF1572	0.86	-1.2
1,601,496	-		GFF1572	0.88	+0.4
1,601,509	-		GFF1572	0.89	-0.1
1,601,542	-				-0.3
1,601,567	-				-0.2
1,601,567	-				+0.1
1,601,623	-				+1.6
1,601,703	+				+1.7
1,601,703	+				-0.2
1,601,703	+				-0.9
1,601,703	+				-1.3
1,601,703	+				+1.2
1,601,711	-				-0.3
1,601,711	-				-1.2
1,601,711	-				-1.2
1,601,711	-				-0.4
1,601,730	+				-0.1
1,601,773	+				-0.5
1,601,773	+				+0.4
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