Strain Fitness in Sphingobium sp. HT1-2 around GFF1506

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,533,935	+				-1.3
1,533,935	+				-0.7
1,533,935	+				+1.2
1,533,940	+				+1.5
1,533,940	+				-0.8
1,533,943	-				-0.8
1,533,948	-				-0.9
1,533,983	+				+1.9
1,533,983	+				-0.2
1,533,991	-				-0.9
1,533,995	-				+0.7
1,534,031	-				-2.4
1,534,081	+				-0.1
1,534,094	-				+0.4
1,534,130	-		GFF1505	0.12	-1.3
1,534,148	-		GFF1505	0.15	-0.4
1,534,160	+		GFF1505	0.16	+0.3
1,534,174	-		GFF1505	0.18	+0.1
1,534,197	+		GFF1505	0.20	-1.5
1,534,215	-		GFF1505	0.22	-1.1
1,534,232	+		GFF1505	0.24	-0.4
1,534,265	+		GFF1505	0.28	-0.0
1,534,273	-		GFF1505	0.29	+0.7
1,534,317	+		GFF1505	0.35	-0.3
1,534,317	+		GFF1505	0.35	+0.1
1,534,317	+		GFF1505	0.35	+0.2
1,534,323	+		GFF1505	0.35	+0.6
1,534,323	+		GFF1505	0.35	-0.3
1,534,325	-		GFF1505	0.35	+1.0
1,534,325	-		GFF1505	0.35	+0.2
1,534,325	-		GFF1505	0.35	+0.2
1,534,331	-		GFF1505	0.36	+1.3
1,534,333	+		GFF1505	0.36	+0.5
1,534,336	+		GFF1505	0.37	-0.8
1,534,342	-		GFF1505	0.37	-0.3
1,534,348	+		GFF1505	0.38	-0.5
1,534,351	-		GFF1505	0.39	-1.8
1,534,353	+		GFF1505	0.39	-0.3
1,534,353	+		GFF1505	0.39	+1.4
1,534,353	+		GFF1505	0.39	-0.2
1,534,353	+		GFF1505	0.39	-0.7
1,534,353	+		GFF1505	0.39	+1.4
1,534,353	+		GFF1505	0.39	-0.1
1,534,361	-		GFF1505	0.40	+0.3
1,534,361	-		GFF1505	0.40	-0.2
1,534,361	-		GFF1505	0.40	-1.1
1,534,361	-		GFF1505	0.40	-0.0
1,534,361	-		GFF1505	0.40	-0.4
1,534,399	-		GFF1505	0.44	-0.3
1,534,400	-		GFF1505	0.44	+0.8
1,534,415	+		GFF1505	0.46	+1.0
1,534,415	+		GFF1505	0.46	+0.5
1,534,418	-		GFF1505	0.46	-1.4
1,534,423	-		GFF1505	0.47	-0.5
1,534,425	+		GFF1505	0.47	+1.2
1,534,435	+		GFF1505	0.48	-1.3
1,534,435	+		GFF1505	0.48	-1.2
1,534,438	-		GFF1505	0.49	-1.8
1,534,444	+		GFF1505	0.49	+1.0
1,534,444	+		GFF1505	0.49	-0.0
1,534,444	+		GFF1505	0.49	-0.4
1,534,445	+		GFF1505	0.50	+1.0
1,534,452	-		GFF1505	0.50	-1.4
1,534,452	-		GFF1505	0.50	-1.1
1,534,452	-		GFF1505	0.50	+0.3
1,534,458	-		GFF1505	0.51	-3.1
1,534,458	-		GFF1505	0.51	-0.1
1,534,473	-		GFF1505	0.53	+1.1
1,534,475	+		GFF1505	0.53	+2.0
1,534,480	+		GFF1505	0.54	+0.1
1,534,482	-		GFF1505	0.54	+0.5
1,534,482	-		GFF1505	0.54	+1.1
1,534,507	+		GFF1505	0.57	+0.3
1,534,519	+		GFF1505	0.58	-0.0
1,534,519	+		GFF1505	0.58	-0.6
1,534,519	+		GFF1505	0.58	-0.6
1,534,527	-		GFF1505	0.59	-0.8
1,534,527	-		GFF1505	0.59	-0.7
1,534,527	-		GFF1505	0.59	-0.2
1,534,528	-		GFF1505	0.59	-1.5
1,534,533	+		GFF1505	0.60	-0.1
1,534,533	+		GFF1505	0.60	-1.0
1,534,536	-		GFF1505	0.60	-1.1
1,534,536	-		GFF1505	0.60	+0.1
1,534,546	+		GFF1505	0.61	-0.9
1,534,546	+		GFF1505	0.61	+0.4
1,534,546	+		GFF1505	0.61	-0.2
1,534,553	-		GFF1505	0.62	-0.0
1,534,554	-		GFF1505	0.62	-1.3
1,534,554	-		GFF1505	0.62	+0.4
1,534,565	-		GFF1505	0.64	+1.0
1,534,577	+		GFF1505	0.65	+1.0
1,534,577	+		GFF1505	0.65	-1.1
1,534,577	+		GFF1505	0.65	+0.1
1,534,585	+		GFF1505	0.66	-0.9
1,534,585	-		GFF1505	0.66	+0.1
1,534,587	+		GFF1505	0.66	-0.3
1,534,587	+		GFF1505	0.66	-1.5
1,534,608	-		GFF1505	0.69	+1.1
1,534,617	+		GFF1505	0.70	-1.6
1,534,625	-		GFF1505	0.71	+0.1
1,534,626	-		GFF1505	0.71	-0.2
1,534,638	+		GFF1505	0.72	-0.0
1,534,671	+		GFF1505	0.76	+0.9
1,534,671	+		GFF1505	0.76	-0.1
1,534,676	+		GFF1505	0.77	+1.1
1,534,679	-		GFF1505	0.77	+0.7
1,534,679	-		GFF1505	0.77	-0.7
1,534,681	+		GFF1505	0.77	-0.3
1,534,684	-		GFF1505	0.78	-0.5
1,534,684	-		GFF1505	0.78	+0.9
1,534,691	+		GFF1505	0.79	+0.7
1,534,696	+		GFF1505	0.79	-0.4
1,534,696	+		GFF1505	0.79	-1.1
1,534,699	-		GFF1505	0.80	-0.4
1,534,699	-		GFF1505	0.80	-1.1
1,534,699	-		GFF1505	0.80	+0.3
1,534,701	+		GFF1505	0.80	+0.2
1,534,701	+		GFF1505	0.80	-1.4
1,534,701	+		GFF1505	0.80	+0.2
1,534,701	+		GFF1505	0.80	-0.2
1,534,703	-		GFF1505	0.80	-1.0
1,534,703	-		GFF1505	0.80	-0.3
1,534,703	-		GFF1505	0.80	-0.8
1,534,704	-		GFF1505	0.80	-1.6
1,534,704	-		GFF1505	0.80	+0.8
1,534,704	-		GFF1505	0.80	-1.0
1,534,709	-		GFF1505	0.81	-0.4
1,534,709	-		GFF1505	0.81	+0.1
1,534,719	-		GFF1505	0.82	+0.2
1,534,719	-		GFF1505	0.82	+1.1
1,534,729	-		GFF1505	0.83	+0.3
1,534,736	+		GFF1505	0.84	+0.6
1,534,749	+		GFF1505	0.85	+1.5
1,534,749	-		GFF1505	0.85	+1.7
1,534,749	-		GFF1505	0.85	-2.7
1,534,749	-		GFF1505	0.85	+0.2
1,534,749	-		GFF1505	0.85	-0.9
1,534,749	-		GFF1505	0.85	+0.4
1,534,749	-		GFF1505	0.85	-0.5
1,534,749	-		GFF1505	0.85	-0.5
1,534,749	-		GFF1505	0.85	-0.0
1,534,777	+		GFF1505	0.89	-0.1
1,534,785	-		GFF1505	0.90	-0.5
1,534,785	-		GFF1505	0.90	-0.5
1,534,790	-				+1.2
1,534,835	-				+0.1
1,534,835	-				-0.2
1,534,835	-				-1.0
1,534,835	-				-0.6
1,534,839	+				-0.3
1,534,845	-				+0.1
1,534,845	-				-1.7
1,534,845	-				+1.6
1,534,852	+				-0.9
1,534,857	+				+0.5
1,534,865	-				-0.3
1,534,876	-				-0.5
1,534,905	-				-1.5
1,534,911	+				+0.5
1,534,911	+				-1.3
1,534,911	+				-1.3
1,534,943	+				+0.3
1,534,948	+				-1.1
1,534,952	-				+0.3
1,534,967	+				-0.4
1,534,975	-				-0.9
1,534,979	+				-0.4
1,534,979	+				-0.8
1,534,979	+				-1.0
1,534,987	-				+0.4
1,534,991	+				-1.6
1,534,996	+				-0.2
1,534,999	-				+2.2
1,535,041	+		GFF1506	0.11	-1.1
1,535,041	+		GFF1506	0.11	+1.9
1,535,041	+		GFF1506	0.11	+0.4
1,535,046	+		GFF1506	0.12	+1.2
1,535,049	-		GFF1506	0.12	-1.4
1,535,049	-		GFF1506	0.12	+1.6
1,535,049	-		GFF1506	0.12	-0.6
1,535,054	-		GFF1506	0.12	+0.3
1,535,059	-		GFF1506	0.13	+1.2
1,535,059	-		GFF1506	0.13	-1.5
1,535,059	-		GFF1506	0.13	+0.7
1,535,062	-		GFF1506	0.13	+0.4
1,535,062	-		GFF1506	0.13	+0.7
1,535,062	-		GFF1506	0.13	-1.4
1,535,085	+		GFF1506	0.15	-0.0
1,535,085	+		GFF1506	0.15	-1.2
1,535,090	+		GFF1506	0.15	+0.3
1,535,092	+		GFF1506	0.15	-0.3
1,535,093	-		GFF1506	0.15	+1.1
1,535,093	-		GFF1506	0.15	-0.8
1,535,093	-		GFF1506	0.15	-1.5
1,535,093	-		GFF1506	0.15	+1.1
1,535,099	+		GFF1506	0.16	+1.7
1,535,107	-		GFF1506	0.17	+0.2
1,535,107	-		GFF1506	0.17	+0.7
1,535,107	-		GFF1506	0.17	-0.5
1,535,132	+		GFF1506	0.19	-1.5
1,535,139	+		GFF1506	0.19	-1.2
1,535,147	-		GFF1506	0.20	-0.9
1,535,172	+		GFF1506	0.22	-0.8
1,535,172	+		GFF1506	0.22	+0.1
1,535,180	-		GFF1506	0.23	+0.3
1,535,180	-		GFF1506	0.23	-0.7
1,535,240	-		GFF1506	0.28	-0.6
1,535,274	+		GFF1506	0.30	-2.2
1,535,284	-		GFF1506	0.31	+0.8
1,535,284	-		GFF1506	0.31	+0.2
1,535,284	-		GFF1506	0.31	+1.2
1,535,299	+		GFF1506	0.32	-1.5
1,535,307	-		GFF1506	0.33	-0.5
1,535,307	-		GFF1506	0.33	+0.1
1,535,333	-		GFF1506	0.35	-1.9
1,535,333	-		GFF1506	0.35	-0.2
1,535,333	-		GFF1506	0.35	-1.5
1,535,350	-		GFF1506	0.37	-1.1
1,535,350	-		GFF1506	0.37	+1.7
1,535,367	-		GFF1506	0.38	-0.9
1,535,403	+		GFF1506	0.41	+0.5
1,535,403	+		GFF1506	0.41	+0.1
1,535,403	+		GFF1506	0.41	-0.2
1,535,411	-		GFF1506	0.42	-0.4
1,535,411	-		GFF1506	0.42	+0.9
1,535,456	-		GFF1506	0.45	+0.7
1,535,520	-		GFF1506	0.50	+0.4
1,535,522	+		GFF1506	0.51	+1.2
1,535,528	+		GFF1506	0.51	-0.4
1,535,537	-		GFF1506	0.52	-2.6
1,535,538	-		GFF1506	0.52	+1.0
1,535,567	-		GFF1506	0.54	+0.6
1,535,593	+		GFF1506	0.56	+0.6
1,535,644	+		GFF1506	0.61	+0.9
1,535,674	+		GFF1506	0.63	+0.8
1,535,679	+		GFF1506	0.63	-0.4
1,535,723	+		GFF1506	0.67	-0.3
1,535,723	+		GFF1506	0.67	+0.6
1,535,723	+		GFF1506	0.67	-0.0
1,535,723	+		GFF1506	0.67	+0.8
1,535,723	+		GFF1506	0.67	+0.1
1,535,723	+		GFF1506	0.67	-0.1
1,535,731	-		GFF1506	0.68	-2.4
1,535,731	-		GFF1506	0.68	+0.7
1,535,731	-		GFF1506	0.68	-0.5
1,535,731	-		GFF1506	0.68	-0.0
1,535,763	+		GFF1506	0.70	+0.7
1,535,763	+		GFF1506	0.70	-0.1
1,535,768	+		GFF1506	0.71	-0.1
1,535,776	-		GFF1506	0.71	+0.4
1,535,776	-		GFF1506	0.71	+0.1
1,535,776	-		GFF1506	0.71	+0.0
1,535,776	-		GFF1506	0.71	+0.9
1,535,784	-		GFF1506	0.72	-0.1
1,535,795	-		GFF1506	0.73	+1.6
1,535,836	+		GFF1506	0.76	-0.2
1,535,836	+		GFF1506	0.76	-0.9
1,535,836	+		GFF1506	0.76	-0.3
1,535,839	-		GFF1506	0.77	-0.6
1,535,844	-		GFF1506	0.77	-0.2
1,535,844	-		GFF1506	0.77	+0.2
1,535,844	-		GFF1506	0.77	-0.6
1,535,844	-		GFF1506	0.77	-0.1
1,535,844	-		GFF1506	0.77	+0.1
1,535,858	+		GFF1506	0.78	-0.6
1,535,874	+		GFF1506	0.79	-0.6
1,535,874	+		GFF1506	0.79	-0.5
1,535,874	+		GFF1506	0.79	+0.4
1,535,882	-		GFF1506	0.80	+0.8
1,535,889	+		GFF1506	0.81	+1.1
1,535,892	-		GFF1506	0.81	-0.1
1,535,893	-		GFF1506	0.81	-0.0
1,535,923	+		GFF1506	0.83	-2.1
1,535,928	+		GFF1506	0.84	-1.3
1,535,933	+		GFF1506	0.84	+0.8
1,535,936	-		GFF1506	0.85	+0.3
1,535,936	-		GFF1506	0.85	+0.1
1,535,941	-		GFF1506	0.85	-0.1
1,535,993	+		GFF1506	0.89	-0.2
1,535,994	+		GFF1506	0.89	+0.1
1,535,994	+		GFF1506	0.89	+0.1
1,535,995	-		GFF1506	0.89	+0.4
1,536,002	-		GFF1506	0.90	+0.6
1,536,002	-		GFF1506	0.90	-0.1
1,536,004	+				-0.7
1,536,011	+				-0.3
1,536,012	+				-1.3
1,536,012	+				-2.9
1,536,012	-				+0.4
1,536,020	-				-0.5
1,536,020	-				-2.7
1,536,026	+				+0.2
1,536,026	+				-1.3
1,536,026	+				-1.4
1,536,029	-				-1.9
1,536,029	-				-1.1
1,536,029	-				+0.2
1,536,033	+				-1.0
1,536,033	+				+0.2
1,536,034	-				+0.3
1,536,034	-				-3.2
1,536,034	-				+0.9
1,536,034	-				-0.6
1,536,034	-				+2.1
1,536,034	-				-0.2
1,536,039	-				+0.6
1,536,041	-				+0.1
1,536,095	+				+0.4
1,536,095	+				+0.2
1,536,105	+				-0.3
1,536,105	+				-1.1
1,536,105	+				-1.4
1,536,105	+				-0.7
1,536,105	+				+0.9
1,536,105	+				+1.2
1,536,105	+				+0.4
1,536,105	+				-1.1
1,536,105	+				+0.1
1,536,105	+				+0.5
1,536,105	+				+0.0
1,536,105	+				-0.6
1,536,105	+				-1.5
1,536,105	+				-0.4
1,536,105	+				-1.0
1,536,113	-				+0.4
1,536,113	-				-0.3
1,536,113	-				+1.4
1,536,113	-				+0.6
1,536,113	-				+0.4
1,536,113	-				-0.0
1,536,113	-				-0.1
1,536,113	-				+0.4
1,536,113	-				-0.5
1,536,113	-				-0.7
1,536,113	-				-1.9
1,536,115	-				-0.5
1,536,151	+				+0.1
1,536,157	-				+0.4
1,536,169	-				+0.6
1,536,190	+				+1.0
1,536,198	-				+0.1
1,536,199	+				+0.0
1,536,204	+				-0.0
1,536,217	+				+0.3
1,536,217	+				+0.1
1,536,230	-				+0.4
1,536,327	+				-1.1
1,536,330	-				-2.9
1,536,335	-				-1.2
1,536,335	-				+1.2
1,536,335	-				-0.3
1,536,407	+		GFF1507	0.14	-1.5
1,536,407	+		GFF1507	0.14	+0.4
1,536,414	+		GFF1507	0.14	-1.1
1,536,423	+		GFF1507	0.15	+0.3
1,536,433	+		GFF1507	0.16	-0.8
1,536,433	+		GFF1507	0.16	-0.8
1,536,446	+		GFF1507	0.16	+1.5
1,536,457	-		GFF1507	0.17	+1.2
1,536,459	+		GFF1507	0.17	+0.4
1,536,462	-		GFF1507	0.17	-0.9
1,536,462	-		GFF1507	0.17	-2.2
1,536,467	-		GFF1507	0.18	+0.5
1,536,468	+		GFF1507	0.18	-1.1
1,536,468	+		GFF1507	0.18	-1.5
1,536,508	+		GFF1507	0.20	+1.2
1,536,513	+		GFF1507	0.21	+0.0
1,536,513	+		GFF1507	0.21	-0.7
1,536,513	+		GFF1507	0.21	-1.5
1,536,518	+		GFF1507	0.21	-0.9
1,536,518	+		GFF1507	0.21	+0.2
1,536,518	+		GFF1507	0.21	+0.9
1,536,518	+		GFF1507	0.21	-0.3
1,536,526	-		GFF1507	0.21	+0.1
1,536,526	-		GFF1507	0.21	+2.2
1,536,526	-		GFF1507	0.21	+0.2
1,536,526	-		GFF1507	0.21	-1.1
1,536,533	-		GFF1507	0.22	+0.2
1,536,537	+		GFF1507	0.22	+1.2
1,536,542	+		GFF1507	0.22	-1.8
1,536,550	-		GFF1507	0.23	-0.2
1,536,592	+		GFF1507	0.25	-0.9
1,536,597	+		GFF1507	0.26	+1.5
1,536,610	-		GFF1507	0.27	-0.1
1,536,648	+		GFF1507	0.29	+0.7
1,536,656	-		GFF1507	0.29	-1.6
1,536,670	+		GFF1507	0.30	-0.3
1,536,678	-		GFF1507	0.31	-0.7
1,536,678	-		GFF1507	0.31	+0.7
1,536,684	+		GFF1507	0.31	+1.0
1,536,697	-		GFF1507	0.32	+1.1
1,536,697	-		GFF1507	0.32	-0.5
1,536,707	-		GFF1507	0.33	+0.0
1,536,731	+		GFF1507	0.34	-0.2
1,536,748	+		GFF1507	0.35	+0.5
1,536,758	-		GFF1507	0.36	-1.6
1,536,785	+		GFF1507	0.38	+0.1
1,536,785	-		GFF1507	0.38	-0.2
1,536,800	+		GFF1507	0.38	+0.6
1,536,800	+		GFF1507	0.38	-1.3
1,536,800	-		GFF1507	0.38	-0.0
1,536,800	-		GFF1507	0.38	-0.2
1,536,804	-		GFF1507	0.39	-0.9
1,536,804	-		GFF1507	0.39	+0.2
1,536,805	+		GFF1507	0.39	+0.5
1,536,833	-		GFF1507	0.40	-1.1
1,536,836	+		GFF1507	0.41	-0.2
1,536,836	+		GFF1507	0.41	+0.1
1,536,836	+		GFF1507	0.41	+0.9
1,536,844	-		GFF1507	0.41	-0.9
1,536,844	-		GFF1507	0.41	-0.0
1,536,844	-		GFF1507	0.41	+0.2
1,536,844	-		GFF1507	0.41	-1.9
1,536,844	-		GFF1507	0.41	-0.1
1,536,884	+		GFF1507	0.44	-0.8
1,536,886	+		GFF1507	0.44	-1.1
1,536,886	+		GFF1507	0.44	-0.3
1,536,892	-		GFF1507	0.44	+0.7
1,536,894	-		GFF1507	0.44	-3.0
1,536,894	-		GFF1507	0.44	+0.2
1,536,894	-		GFF1507	0.44	-0.3
1,536,909	+		GFF1507	0.45	+0.1
1,536,979	-		GFF1507	0.50	+0.3
1,536,980	+		GFF1507	0.50	-0.6
1,536,984	+		GFF1507	0.50	+0.7
1,537,016	+		GFF1507	0.52	-0.6
1,537,024	-		GFF1507	0.52	+0.3
1,537,024	-		GFF1507	0.52	+0.4
1,537,030	+		GFF1507	0.53	+0.9
1,537,038	-		GFF1507	0.53	+1.4
1,537,038	-		GFF1507	0.53	+1.0
1,537,040	+		GFF1507	0.53	-0.4
1,537,040	+		GFF1507	0.53	+0.3
1,537,048	-		GFF1507	0.54	+0.9
1,537,059	-		GFF1507	0.55	-2.0
1,537,088	-		GFF1507	0.56	-1.0
1,537,089	-		GFF1507	0.56	-1.0
1,537,098	-		GFF1507	0.57	+0.9
1,537,120	-		GFF1507	0.58	-0.4