Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06889 and MPMX19_06890 overlap by 1 nucleotides MPMX19_06890 and MPMX19_06891 are separated by 86 nucleotides MPMX19_06891 and MPMX19_06892 overlap by 4 nucleotides
MPMX19_06889: MPMX19_06889 - Dimethyl sulfoxide/trimethylamine N-oxide reductase, at 161,972 to 164,272
_06889
MPMX19_06890: MPMX19_06890 - hypothetical protein, at 164,272 to 165,309
_06890
MPMX19_06891: MPMX19_06891 - Aliphatic sulfonates import ATP-binding protein SsuB, at 165,396 to 166,121
_06891
MPMX19_06892: MPMX19_06892 - Putative aliphatic sulfonates transport permease protein SsuC, at 166,118 to 166,993
_06892
Position (kb) 164
165
166 Strain fitness (log2 ratio) -2
-1
0
1 at 163.443 kb on + strand, within MPMX19_06889 at 163.443 kb on + strand, within MPMX19_06889 at 163.444 kb on - strand, within MPMX19_06889 at 163.444 kb on - strand, within MPMX19_06889 at 163.845 kb on + strand, within MPMX19_06889 at 163.866 kb on + strand, within MPMX19_06889 at 163.941 kb on + strand, within MPMX19_06889 at 163.941 kb on + strand, within MPMX19_06889 at 163.941 kb on + strand, within MPMX19_06889 at 164.230 kb on - strand at 164.418 kb on - strand, within MPMX19_06890 at 164.418 kb on - strand, within MPMX19_06890 at 164.418 kb on - strand, within MPMX19_06890 at 164.418 kb on - strand, within MPMX19_06890 at 164.418 kb on - strand, within MPMX19_06890 at 164.577 kb on - strand, within MPMX19_06890 at 164.577 kb on - strand, within MPMX19_06890 at 164.577 kb on - strand, within MPMX19_06890 at 164.577 kb on - strand, within MPMX19_06890 at 164.577 kb on - strand, within MPMX19_06890 at 164.639 kb on + strand, within MPMX19_06890 at 164.639 kb on + strand, within MPMX19_06890 at 164.639 kb on + strand, within MPMX19_06890 at 164.639 kb on + strand, within MPMX19_06890 at 164.735 kb on + strand, within MPMX19_06890 at 164.904 kb on - strand, within MPMX19_06890 at 164.904 kb on - strand, within MPMX19_06890 at 164.904 kb on - strand, within MPMX19_06890 at 164.904 kb on - strand, within MPMX19_06890 at 165.285 kb on + strand at 166.043 kb on - strand, within MPMX19_06891 at 166.134 kb on + strand at 166.134 kb on + strand at 166.134 kb on + strand at 166.134 kb on + strand at 166.134 kb on + strand at 166.135 kb on - strand at 166.135 kb on - strand at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892 at 166.210 kb on - strand, within MPMX19_06892
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 163,443 + MPMX19_06889 0.64 +0.4 163,443 + MPMX19_06889 0.64 +0.2 163,444 - MPMX19_06889 0.64 -1.3 163,444 - MPMX19_06889 0.64 -0.7 163,845 + MPMX19_06889 0.81 +0.8 163,866 + MPMX19_06889 0.82 -1.6 163,941 + MPMX19_06889 0.86 -0.6 163,941 + MPMX19_06889 0.86 -0.1 163,941 + MPMX19_06889 0.86 -0.4 164,230 - +0.1 164,418 - MPMX19_06890 0.14 +1.1 164,418 - MPMX19_06890 0.14 +0.7 164,418 - MPMX19_06890 0.14 +0.9 164,418 - MPMX19_06890 0.14 +0.0 164,418 - MPMX19_06890 0.14 -0.6 164,577 - MPMX19_06890 0.29 -1.0 164,577 - MPMX19_06890 0.29 +0.7 164,577 - MPMX19_06890 0.29 -0.8 164,577 - MPMX19_06890 0.29 -0.4 164,577 - MPMX19_06890 0.29 +1.2 164,639 + MPMX19_06890 0.35 -1.2 164,639 + MPMX19_06890 0.35 -2.0 164,639 + MPMX19_06890 0.35 +0.3 164,639 + MPMX19_06890 0.35 -0.9 164,735 + MPMX19_06890 0.45 +0.0 164,904 - MPMX19_06890 0.61 +1.1 164,904 - MPMX19_06890 0.61 +0.6 164,904 - MPMX19_06890 0.61 +0.7 164,904 - MPMX19_06890 0.61 -1.2 165,285 + +1.3 166,043 - MPMX19_06891 0.89 +1.1 166,134 + -0.5 166,134 + -0.7 166,134 + +0.2 166,134 + -0.1 166,134 + +1.6 166,135 - -0.6 166,135 - +0.9 166,210 - MPMX19_06892 0.11 -0.4 166,210 - MPMX19_06892 0.11 +0.5 166,210 - MPMX19_06892 0.11 -1.6 166,210 - MPMX19_06892 0.11 -0.9 166,210 - MPMX19_06892 0.11 -1.2 166,210 - MPMX19_06892 0.11 +1.6 166,210 - MPMX19_06892 0.11 -0.6
Or see this region's nucleotide sequence