Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06823

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
86,799	+		MPMX19_06822	0.17	+0.3
86,800	-		MPMX19_06822	0.17	+0.2
86,871	+		MPMX19_06822	0.24	-0.8
86,871	+		MPMX19_06822	0.24	+0.2
86,871	+		MPMX19_06822	0.24	-0.4
86,871	+		MPMX19_06822	0.24	+0.0
86,871	+		MPMX19_06822	0.24	-1.8
86,871	+		MPMX19_06822	0.24	+0.0
86,871	+		MPMX19_06822	0.24	+0.2
86,871	+		MPMX19_06822	0.24	-1.4
86,872	-		MPMX19_06822	0.24	-0.2
86,872	-		MPMX19_06822	0.24	+0.8
86,872	-		MPMX19_06822	0.24	-0.7
86,872	-		MPMX19_06822	0.24	-0.2
86,872	-		MPMX19_06822	0.24	+1.2
86,872	-		MPMX19_06822	0.24	+0.1
86,898	+		MPMX19_06822	0.26	-0.3
86,971	-		MPMX19_06822	0.33	+0.1
87,018	+		MPMX19_06822	0.37	-1.7
87,018	+		MPMX19_06822	0.37	+0.0
87,018	+		MPMX19_06822	0.37	-1.2
87,018	+		MPMX19_06822	0.37	-0.7
87,018	+		MPMX19_06822	0.37	+0.9
87,019	-		MPMX19_06822	0.37	-0.8
87,019	-		MPMX19_06822	0.37	-0.4
87,019	-		MPMX19_06822	0.37	-1.2
87,019	-		MPMX19_06822	0.37	-0.3
87,268	-		MPMX19_06822	0.59	-1.2
87,268	-		MPMX19_06822	0.59	-0.2
87,285	+		MPMX19_06822	0.61	-2.3
87,285	+		MPMX19_06822	0.61	-1.0
87,333	+		MPMX19_06822	0.65	-2.2
87,333	+		MPMX19_06822	0.65	-0.6
87,334	-		MPMX19_06822	0.65	-0.3
87,334	-		MPMX19_06822	0.65	-0.1
87,334	-		MPMX19_06822	0.65	-1.0
87,334	-		MPMX19_06822	0.65	-0.3
87,384	+		MPMX19_06822	0.70	-0.6
87,385	-		MPMX19_06822	0.70	-0.7
87,385	-		MPMX19_06822	0.70	-1.7
87,390	+		MPMX19_06822	0.70	-1.0
87,876	+				+0.4
87,912	+				+0.6
87,912	+				-0.0
87,912	+				-1.3
87,912	+				-1.6
87,912	+				+0.3
87,912	+				+0.9
87,912	+				+0.6
87,912	+				+0.6
87,912	+				+0.4
87,913	-				-1.7
87,913	-				+0.4
87,913	-				+0.0
87,913	-				-1.5
87,927	+		MPMX19_06823	0.11	+0.3
87,927	+		MPMX19_06823	0.11	+1.1
87,928	-		MPMX19_06823	0.11	+0.6
87,928	-		MPMX19_06823	0.11	-1.0
87,928	-		MPMX19_06823	0.11	-0.4
88,021	-		MPMX19_06823	0.17	-1.6
88,155	+		MPMX19_06823	0.26	-0.7
88,155	+		MPMX19_06823	0.26	+0.6
88,156	-		MPMX19_06823	0.26	+0.4
88,156	-		MPMX19_06823	0.26	-2.0
88,156	-		MPMX19_06823	0.26	-1.4
88,156	-		MPMX19_06823	0.26	-0.2
88,156	-		MPMX19_06823	0.26	-0.7
88,239	+		MPMX19_06823	0.31	+1.3
88,239	+		MPMX19_06823	0.31	-2.0
88,239	+		MPMX19_06823	0.31	-0.8
88,239	+		MPMX19_06823	0.31	+0.4
88,239	+		MPMX19_06823	0.31	+0.3
88,239	+		MPMX19_06823	0.31	-0.4
88,240	-		MPMX19_06823	0.31	+0.3
88,240	-		MPMX19_06823	0.31	+0.0
88,240	-		MPMX19_06823	0.31	-1.4
88,240	-		MPMX19_06823	0.31	-1.6
88,240	-		MPMX19_06823	0.31	+0.9
88,240	-		MPMX19_06823	0.31	+0.0
88,240	-		MPMX19_06823	0.31	+0.8
88,240	-		MPMX19_06823	0.31	-0.9
88,240	-		MPMX19_06823	0.31	-0.2
88,240	-		MPMX19_06823	0.31	+0.6
88,362	+		MPMX19_06823	0.39	+0.5
88,362	+		MPMX19_06823	0.39	-0.2
88,362	+		MPMX19_06823	0.39	+0.5
88,362	+		MPMX19_06823	0.39	+0.2
88,363	-		MPMX19_06823	0.39	+0.2
88,363	-		MPMX19_06823	0.39	-0.4
88,363	-		MPMX19_06823	0.39	-0.5
88,363	-		MPMX19_06823	0.39	-1.9
88,363	-		MPMX19_06823	0.39	-0.8
88,914	+		MPMX19_06823	0.76	-0.8
88,914	+		MPMX19_06823	0.76	+0.6
88,914	+		MPMX19_06823	0.76	-1.7
88,914	+		MPMX19_06823	0.76	-0.5
88,915	-		MPMX19_06823	0.76	+0.4
88,915	-		MPMX19_06823	0.76	-0.8
88,915	-		MPMX19_06823	0.76	-1.5
88,915	-		MPMX19_06823	0.76	-1.0
88,920	+		MPMX19_06823	0.76	+1.4
88,920	+		MPMX19_06823	0.76	+0.4
88,920	+		MPMX19_06823	0.76	-0.6
88,920	+		MPMX19_06823	0.76	-0.3
88,920	+		MPMX19_06823	0.76	-1.7
88,920	+		MPMX19_06823	0.76	-0.5
88,920	+		MPMX19_06823	0.76	-0.6
88,920	+		MPMX19_06823	0.76	-0.1
88,920	+		MPMX19_06823	0.76	-2.1
88,920	+		MPMX19_06823	0.76	-1.3
88,920	+		MPMX19_06823	0.76	-0.3
88,920	+		MPMX19_06823	0.76	+1.3
88,920	+		MPMX19_06823	0.76	+0.2
88,921	-		MPMX19_06823	0.76	-0.4
88,921	-		MPMX19_06823	0.76	-0.2
88,921	-		MPMX19_06823	0.76	+1.0
88,921	-		MPMX19_06823	0.76	-0.9
88,921	-		MPMX19_06823	0.76	-1.5
88,921	-		MPMX19_06823	0.76	-0.1
88,921	-		MPMX19_06823	0.76	+0.0
88,921	-		MPMX19_06823	0.76	-0.1
88,921	-		MPMX19_06823	0.76	-0.8
88,921	-		MPMX19_06823	0.76	-0.2
88,921	-		MPMX19_06823	0.76	+0.9
88,921	-		MPMX19_06823	0.76	-1.0
88,921	-		MPMX19_06823	0.76	-2.5
88,921	-		MPMX19_06823	0.76	-0.3
88,921	-		MPMX19_06823	0.76	-2.4
88,921	-		MPMX19_06823	0.76	+0.6
88,921	-		MPMX19_06823	0.76	+0.4
88,921	-		MPMX19_06823	0.76	+0.6
88,921	-		MPMX19_06823	0.76	+1.0
89,154	+				-0.1
89,154	+				+0.1
89,181	+				+0.0
89,182	-				+0.8
89,182	-				+0.8
89,182	-				-1.1
89,182	-				+0.1
89,193	+				-0.9
89,193	+				-0.4
89,193	+				-0.7
89,194	-				-1.1
89,194	-				+0.5
89,194	-				-1.2
89,232	+				+0.0
89,232	+				-0.1
89,232	+				+0.9
89,232	+				-0.2
89,232	+				-0.3
89,232	+				-1.9
89,232	+				-0.1
89,232	+				+1.0
89,232	+				-0.6
89,233	-				-2.5
89,233	-				-0.2
89,233	-				-1.1
89,233	-				+0.6
89,233	-				+1.0
89,233	-				+0.3
89,289	+				-0.6
89,400	+				+0.6
89,400	+				+0.6
89,400	+				-0.5
89,400	+				-0.2
89,400	+				+0.4
89,401	-				-0.2
89,401	-				+0.5
89,436	+		MPMX19_06824	0.12	-1.2
89,436	+		MPMX19_06824	0.12	-1.2
89,436	+		MPMX19_06824	0.12	-0.3
89,437	-		MPMX19_06824	0.12	-1.1
89,437	-		MPMX19_06824	0.12	-0.1
89,437	-		MPMX19_06824	0.12	-0.7
89,437	-		MPMX19_06824	0.12	-0.9
89,563	-		MPMX19_06824	0.24	-0.7
89,563	-		MPMX19_06824	0.24	+0.8
89,607	+		MPMX19_06824	0.29	-0.1
90,119	-		MPMX19_06824	0.79	+0.9
90,256	+				-0.8
90,256	+				+0.0
90,257	-				-0.6
90,257	-				+0.9