Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06738 and MPMX19_06739 are separated by 150 nucleotides MPMX19_06739 and MPMX19_06740 overlap by 4 nucleotides MPMX19_06740 and MPMX19_06741 are separated by 409 nucleotides
MPMX19_06738: MPMX19_06738 - Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha, at 2,730 to 3,680
_06738
MPMX19_06739: MPMX19_06739 - hypothetical protein, at 3,831 to 5,192
_06739
MPMX19_06740: MPMX19_06740 - hypothetical protein, at 5,189 to 5,743
_06740
MPMX19_06741: MPMX19_06741 - hypothetical protein, at 6,153 to 6,431
_06741
Position (kb) 3
4
5
6 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 2.938 kb on + strand, within MPMX19_06738 at 2.938 kb on + strand, within MPMX19_06738 at 2.938 kb on + strand, within MPMX19_06738 at 2.938 kb on + strand, within MPMX19_06738 at 2.939 kb on - strand, within MPMX19_06738 at 2.939 kb on - strand, within MPMX19_06738 at 2.977 kb on + strand, within MPMX19_06738 at 2.978 kb on - strand, within MPMX19_06738 at 3.098 kb on - strand, within MPMX19_06738 at 3.098 kb on - strand, within MPMX19_06738 at 3.184 kb on + strand, within MPMX19_06738 at 3.184 kb on + strand, within MPMX19_06738 at 3.184 kb on + strand, within MPMX19_06738 at 3.184 kb on + strand, within MPMX19_06738 at 3.184 kb on + strand, within MPMX19_06738 at 3.185 kb on - strand, within MPMX19_06738 at 3.185 kb on - strand, within MPMX19_06738 at 3.185 kb on - strand, within MPMX19_06738 at 3.626 kb on - strand at 3.720 kb on - strand at 3.745 kb on + strand at 3.745 kb on + strand at 3.746 kb on - strand at 3.779 kb on - strand at 4.096 kb on + strand, within MPMX19_06739 at 4.096 kb on + strand, within MPMX19_06739 at 4.097 kb on - strand, within MPMX19_06739 at 4.097 kb on - strand, within MPMX19_06739 at 4.132 kb on + strand, within MPMX19_06739 at 4.270 kb on + strand, within MPMX19_06739 at 4.270 kb on + strand, within MPMX19_06739 at 4.270 kb on + strand, within MPMX19_06739 at 4.270 kb on + strand, within MPMX19_06739 at 4.271 kb on - strand, within MPMX19_06739 at 4.447 kb on + strand, within MPMX19_06739 at 4.448 kb on - strand, within MPMX19_06739 at 4.448 kb on - strand, within MPMX19_06739 at 4.912 kb on + strand, within MPMX19_06739 at 4.912 kb on + strand, within MPMX19_06739 at 4.912 kb on + strand, within MPMX19_06739 at 4.912 kb on + strand, within MPMX19_06739 at 4.912 kb on + strand, within MPMX19_06739 at 4.912 kb on + strand, within MPMX19_06739 at 4.912 kb on + strand, within MPMX19_06739 at 4.913 kb on - strand, within MPMX19_06739 at 4.913 kb on - strand, within MPMX19_06739 at 5.017 kb on + strand, within MPMX19_06739 at 5.017 kb on + strand, within MPMX19_06739 at 5.017 kb on + strand, within MPMX19_06739 at 5.018 kb on - strand, within MPMX19_06739 at 5.018 kb on - strand, within MPMX19_06739 at 5.047 kb on + strand, within MPMX19_06739 at 5.047 kb on + strand, within MPMX19_06739 at 5.047 kb on + strand, within MPMX19_06739 at 5.047 kb on + strand, within MPMX19_06739 at 5.047 kb on + strand, within MPMX19_06739 at 5.047 kb on + strand, within MPMX19_06739 at 5.048 kb on - strand, within MPMX19_06739 at 5.048 kb on - strand, within MPMX19_06739 at 5.048 kb on - strand, within MPMX19_06739 at 5.187 kb on - strand at 5.187 kb on - strand at 5.187 kb on - strand at 5.187 kb on - strand at 5.235 kb on + strand at 5.235 kb on + strand at 5.236 kb on - strand at 5.236 kb on - strand at 5.236 kb on - strand at 5.774 kb on + strand at 5.774 kb on + strand at 5.774 kb on + strand at 5.774 kb on + strand at 5.775 kb on - strand at 5.775 kb on - strand at 5.775 kb on - strand at 5.775 kb on - strand at 5.944 kb on + strand at 5.944 kb on + strand at 5.945 kb on - strand at 5.949 kb on + strand at 5.950 kb on - strand at 5.950 kb on - strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.956 kb on + strand at 5.957 kb on - strand at 5.957 kb on - strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.958 kb on + strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand at 5.959 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 2,938 + MPMX19_06738 0.22 +0.6 2,938 + MPMX19_06738 0.22 -1.0 2,938 + MPMX19_06738 0.22 +0.8 2,938 + MPMX19_06738 0.22 -0.6 2,939 - MPMX19_06738 0.22 +1.0 2,939 - MPMX19_06738 0.22 -0.4 2,977 + MPMX19_06738 0.26 -1.7 2,978 - MPMX19_06738 0.26 +0.4 3,098 - MPMX19_06738 0.39 -0.7 3,098 - MPMX19_06738 0.39 +1.2 3,184 + MPMX19_06738 0.48 -1.1 3,184 + MPMX19_06738 0.48 -1.4 3,184 + MPMX19_06738 0.48 -0.6 3,184 + MPMX19_06738 0.48 -0.2 3,184 + MPMX19_06738 0.48 +0.2 3,185 - MPMX19_06738 0.48 -0.4 3,185 - MPMX19_06738 0.48 -0.9 3,185 - MPMX19_06738 0.48 -0.5 3,626 - +0.0 3,720 - +0.9 3,745 + -1.9 3,745 + -1.4 3,746 - -0.3 3,779 - -1.2 4,096 + MPMX19_06739 0.19 +0.1 4,096 + MPMX19_06739 0.19 +0.1 4,097 - MPMX19_06739 0.20 -1.6 4,097 - MPMX19_06739 0.20 +1.0 4,132 + MPMX19_06739 0.22 -1.9 4,270 + MPMX19_06739 0.32 +0.6 4,270 + MPMX19_06739 0.32 -0.1 4,270 + MPMX19_06739 0.32 -0.9 4,270 + MPMX19_06739 0.32 -0.9 4,271 - MPMX19_06739 0.32 +0.0 4,447 + MPMX19_06739 0.45 -0.6 4,448 - MPMX19_06739 0.45 -1.4 4,448 - MPMX19_06739 0.45 -0.6 4,912 + MPMX19_06739 0.79 +0.0 4,912 + MPMX19_06739 0.79 -1.6 4,912 + MPMX19_06739 0.79 +0.3 4,912 + MPMX19_06739 0.79 +1.1 4,912 + MPMX19_06739 0.79 -0.8 4,912 + MPMX19_06739 0.79 -0.1 4,912 + MPMX19_06739 0.79 -1.1 4,913 - MPMX19_06739 0.79 -0.1 4,913 - MPMX19_06739 0.79 -1.1 5,017 + MPMX19_06739 0.87 -0.3 5,017 + MPMX19_06739 0.87 -2.0 5,017 + MPMX19_06739 0.87 -1.7 5,018 - MPMX19_06739 0.87 -0.9 5,018 - MPMX19_06739 0.87 -0.9 5,047 + MPMX19_06739 0.89 +0.0 5,047 + MPMX19_06739 0.89 +0.2 5,047 + MPMX19_06739 0.89 -0.6 5,047 + MPMX19_06739 0.89 +0.1 5,047 + MPMX19_06739 0.89 -1.4 5,047 + MPMX19_06739 0.89 -0.6 5,048 - MPMX19_06739 0.89 -0.1 5,048 - MPMX19_06739 0.89 +0.8 5,048 - MPMX19_06739 0.89 -0.9 5,187 - -0.7 5,187 - -0.2 5,187 - +0.1 5,187 - +0.0 5,235 + -1.1 5,235 + -0.4 5,236 - -0.5 5,236 - -0.4 5,236 - -2.2 5,774 + +0.0 5,774 + +1.6 5,774 + -1.0 5,774 + -0.5 5,775 - +0.2 5,775 - -0.6 5,775 - -0.3 5,775 - -0.3 5,944 + -1.2 5,944 + -0.3 5,945 - -1.0 5,949 + -0.7 5,950 - -0.1 5,950 - +0.2 5,956 + -1.3 5,956 + -1.0 5,956 + -0.8 5,956 + -0.4 5,956 + -0.8 5,956 + -1.2 5,956 + -0.5 5,956 + -0.8 5,957 - -1.4 5,957 - -0.7 5,958 + -1.6 5,958 + -0.6 5,958 + +0.0 5,958 + +0.4 5,958 + -1.7 5,958 + -0.6 5,958 + -1.6 5,958 + -0.2 5,958 + -1.0 5,958 + -1.2 5,958 + -0.5 5,958 + +0.0 5,958 + -1.6 5,958 + -2.0 5,958 + +1.9 5,958 + -0.1 5,958 + -0.8 5,958 + -2.0 5,958 + -2.3 5,959 - -1.0 5,959 - -1.5 5,959 - +0.0 5,959 - -0.1 5,959 - -1.6 5,959 - -1.2 5,959 - -0.7 5,959 - -1.4 5,959 - +0.3 5,959 - -1.3 5,959 - -3.0 5,959 - -0.3 5,959 - -1.7 5,959 - +0.5 5,959 - -0.4 5,959 - +2.0 5,959 - -1.6 5,959 - -1.6 5,959 - +0.6
Or see this region's nucleotide sequence