Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06350

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
115,490	+				-0.0
115,568	+				+0.7
115,568	+				-0.5
115,569	-				-1.4
115,569	-				+0.1
115,569	-				-0.5
115,580	+				-0.5
115,580	+				+0.8
115,580	+				-0.1
115,580	+				+0.5
115,580	+				-0.8
115,581	-				-1.5
115,581	-				-0.1
115,614	+				+0.2
115,702	-		MPMX19_06349	0.12	-0.3
115,716	+		MPMX19_06349	0.14	+0.5
115,716	+		MPMX19_06349	0.14	+0.5
115,717	-		MPMX19_06349	0.14	-0.1
115,717	-		MPMX19_06349	0.14	-0.3
115,754	+		MPMX19_06349	0.19	-0.7
115,754	+		MPMX19_06349	0.19	+0.2
115,754	+		MPMX19_06349	0.19	+0.7
115,754	+		MPMX19_06349	0.19	-0.5
115,754	+		MPMX19_06349	0.19	-1.0
115,754	+		MPMX19_06349	0.19	+0.4
115,754	+		MPMX19_06349	0.19	-0.4
115,754	+		MPMX19_06349	0.19	-0.2
115,754	+		MPMX19_06349	0.19	-1.4
115,754	+		MPMX19_06349	0.19	-0.3
115,755	-		MPMX19_06349	0.19	+0.5
115,755	-		MPMX19_06349	0.19	-0.1
115,755	-		MPMX19_06349	0.19	-0.5
115,755	-		MPMX19_06349	0.19	-0.2
115,755	-		MPMX19_06349	0.19	-1.7
115,755	-		MPMX19_06349	0.19	+1.8
115,785	+		MPMX19_06349	0.23	-1.4
115,785	+		MPMX19_06349	0.23	-1.4
115,785	+		MPMX19_06349	0.23	-0.7
115,785	+		MPMX19_06349	0.23	+1.1
115,785	+		MPMX19_06349	0.23	-0.4
115,786	-		MPMX19_06349	0.23	-1.4
115,786	-		MPMX19_06349	0.23	-1.1
115,786	-		MPMX19_06349	0.23	-0.3
115,786	-		MPMX19_06349	0.23	-2.3
115,786	-		MPMX19_06349	0.23	+0.4
115,786	-		MPMX19_06349	0.23	+0.7
115,788	+		MPMX19_06349	0.23	+0.2
116,220	+		MPMX19_06349	0.80	-0.1
116,220	+		MPMX19_06349	0.80	-1.0
116,220	+		MPMX19_06349	0.80	+0.5
116,220	+		MPMX19_06349	0.80	+0.1
116,220	+		MPMX19_06349	0.80	+0.2
116,220	+		MPMX19_06349	0.80	+0.8
116,220	+		MPMX19_06349	0.80	-0.5
116,220	+		MPMX19_06349	0.80	-0.1
116,221	-		MPMX19_06349	0.80	-0.0
116,221	-		MPMX19_06349	0.80	-1.7
116,221	-		MPMX19_06349	0.80	-1.0
116,221	-		MPMX19_06349	0.80	-2.7
116,244	+		MPMX19_06349	0.83	-0.7
116,244	+		MPMX19_06349	0.83	-0.2
116,244	+		MPMX19_06349	0.83	-2.2
116,245	-		MPMX19_06349	0.83	-0.2
116,319	+				+0.2
116,319	+				-0.0
116,319	+				-1.3
116,320	-				+0.3
116,320	-				+0.5
116,320	-				-0.0
116,320	-				-0.9
116,320	-				+0.3
116,320	-				+1.0
116,389	+				-0.0
116,390	-				-1.5
116,602	+		MPMX19_06350	0.22	+0.5
116,602	+		MPMX19_06350	0.22	+0.6
116,602	+		MPMX19_06350	0.22	-0.2
116,603	-		MPMX19_06350	0.22	-0.5
116,603	-		MPMX19_06350	0.22	+0.4
116,624	-		MPMX19_06350	0.24	-1.9
116,624	-		MPMX19_06350	0.24	-0.3
116,762	+		MPMX19_06350	0.37	-0.1
116,763	-		MPMX19_06350	0.37	-0.5
116,843	-		MPMX19_06350	0.44	+0.5
116,843	-		MPMX19_06350	0.44	+0.3
116,843	-		MPMX19_06350	0.44	+0.1
116,843	-		MPMX19_06350	0.44	+0.6
116,971	+		MPMX19_06350	0.56	+1.3
116,972	-		MPMX19_06350	0.56	-0.4
116,972	-		MPMX19_06350	0.56	+0.6
116,972	-		MPMX19_06350	0.56	-0.5
117,379	+				+1.5
117,379	+				-0.7
117,379	+				+1.3
117,379	+				-0.7
117,379	+				-1.4
117,380	-				-1.5
117,380	-				-0.3
117,787	+		MPMX19_06351	0.77	-0.6
117,787	+		MPMX19_06351	0.77	+1.1
117,787	+		MPMX19_06351	0.77	-1.4
117,788	-		MPMX19_06351	0.77	-0.3
117,788	-		MPMX19_06351	0.77	-0.6
117,868	+				+0.5
117,868	+				-0.4
117,868	+				+0.3
117,868	+				-1.1
117,868	+				-0.3
117,868	+				-0.2
117,868	+				-1.2
117,868	+				+0.2
117,868	+				-1.4
117,868	+				-1.0
117,868	+				-1.0
117,868	+				+0.9
117,868	+				+0.9
117,868	+				-0.9
117,869	-				-0.8
117,869	-				+0.5
117,869	-				-1.0
117,869	-				-2.3
117,869	-				-1.9
117,869	-				-0.3
117,869	-				+1.4
117,869	-				+0.2
117,869	-				-1.1
117,869	-				-0.1
117,923	-				+0.5
117,991	+		MPMX19_06352	0.21	+0.3
118,386	+				+3.8
118,387	-				-1.2
118,387	-				-0.0
118,387	-				-0.6
118,387	-				-1.4
118,387	-				+1.3
118,387	-				-1.7