Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06098 and MPMX19_06099 are separated by 21 nucleotides MPMX19_06099 and MPMX19_06100 are separated by 168 nucleotides
MPMX19_06098: MPMX19_06098 - Transcriptional regulatory protein TyrR, at 279,325 to 280,854
_06098
MPMX19_06099: MPMX19_06099 - hypothetical protein, at 280,876 to 281,685
_06099
MPMX19_06100: MPMX19_06100 - Electron transfer flavoprotein-ubiquinone oxidoreductase, at 281,854 to 283,503
_06100
Position (kb) 280
281
282 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 280.135 kb on + strand, within MPMX19_06098 at 280.135 kb on + strand, within MPMX19_06098 at 280.243 kb on + strand, within MPMX19_06098 at 280.243 kb on + strand, within MPMX19_06098 at 280.243 kb on + strand, within MPMX19_06098 at 280.244 kb on - strand, within MPMX19_06098 at 280.244 kb on - strand, within MPMX19_06098 at 280.244 kb on - strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.377 kb on + strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.378 kb on - strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.399 kb on + strand, within MPMX19_06098 at 280.400 kb on - strand, within MPMX19_06098 at 280.834 kb on + strand at 280.834 kb on + strand at 280.834 kb on + strand at 280.834 kb on + strand at 280.834 kb on + strand at 280.835 kb on - strand at 280.835 kb on - strand at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.151 kb on + strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.152 kb on - strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.315 kb on + strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.316 kb on - strand, within MPMX19_06099 at 281.366 kb on + strand, within MPMX19_06099 at 281.366 kb on + strand, within MPMX19_06099 at 281.367 kb on - strand, within MPMX19_06099 at 281.367 kb on - strand, within MPMX19_06099 at 281.367 kb on - strand, within MPMX19_06099 at 281.367 kb on - strand, within MPMX19_06099 at 281.649 kb on + strand at 281.649 kb on + strand at 281.649 kb on + strand at 281.649 kb on + strand at 281.649 kb on + strand at 281.649 kb on + strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.650 kb on - strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.651 kb on + strand at 281.652 kb on - strand at 281.652 kb on - strand at 281.717 kb on + strand at 281.717 kb on + strand at 281.718 kb on - strand at 281.718 kb on - strand at 281.718 kb on - strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.719 kb on + strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.720 kb on - strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.723 kb on + strand at 281.724 kb on - strand at 281.724 kb on - strand at 281.724 kb on - strand at 281.724 kb on - strand at 281.724 kb on - strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.855 kb on + strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand at 281.856 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 280,135 + MPMX19_06098 0.53 +1.0 280,135 + MPMX19_06098 0.53 -0.3 280,243 + MPMX19_06098 0.60 +0.0 280,243 + MPMX19_06098 0.60 -0.5 280,243 + MPMX19_06098 0.60 -1.7 280,244 - MPMX19_06098 0.60 -0.4 280,244 - MPMX19_06098 0.60 +0.7 280,244 - MPMX19_06098 0.60 +0.1 280,377 + MPMX19_06098 0.69 -0.0 280,377 + MPMX19_06098 0.69 +0.7 280,377 + MPMX19_06098 0.69 +0.5 280,377 + MPMX19_06098 0.69 -0.7 280,377 + MPMX19_06098 0.69 -3.0 280,377 + MPMX19_06098 0.69 -0.3 280,377 + MPMX19_06098 0.69 -0.1 280,377 + MPMX19_06098 0.69 -1.6 280,377 + MPMX19_06098 0.69 -0.4 280,378 - MPMX19_06098 0.69 -1.4 280,378 - MPMX19_06098 0.69 +1.5 280,378 - MPMX19_06098 0.69 -0.4 280,378 - MPMX19_06098 0.69 +0.8 280,378 - MPMX19_06098 0.69 +0.2 280,378 - MPMX19_06098 0.69 -0.8 280,378 - MPMX19_06098 0.69 -0.3 280,378 - MPMX19_06098 0.69 -0.3 280,378 - MPMX19_06098 0.69 +1.0 280,378 - MPMX19_06098 0.69 -0.2 280,378 - MPMX19_06098 0.69 -0.6 280,378 - MPMX19_06098 0.69 +1.7 280,399 + MPMX19_06098 0.70 -1.2 280,399 + MPMX19_06098 0.70 -0.9 280,399 + MPMX19_06098 0.70 -0.1 280,399 + MPMX19_06098 0.70 -0.9 280,399 + MPMX19_06098 0.70 -0.4 280,399 + MPMX19_06098 0.70 -0.7 280,400 - MPMX19_06098 0.70 -0.9 280,834 + +1.4 280,834 + +0.7 280,834 + -1.7 280,834 + -0.1 280,834 + -1.1 280,835 - +0.4 280,835 - +1.0 281,151 + MPMX19_06099 0.34 -0.6 281,151 + MPMX19_06099 0.34 -1.3 281,151 + MPMX19_06099 0.34 -1.2 281,151 + MPMX19_06099 0.34 -0.3 281,151 + MPMX19_06099 0.34 -0.2 281,151 + MPMX19_06099 0.34 -0.6 281,151 + MPMX19_06099 0.34 +0.5 281,151 + MPMX19_06099 0.34 -0.6 281,151 + MPMX19_06099 0.34 +0.3 281,151 + MPMX19_06099 0.34 +0.1 281,151 + MPMX19_06099 0.34 -0.6 281,151 + MPMX19_06099 0.34 -1.6 281,152 - MPMX19_06099 0.34 -1.1 281,152 - MPMX19_06099 0.34 -0.2 281,152 - MPMX19_06099 0.34 -1.5 281,152 - MPMX19_06099 0.34 -0.2 281,152 - MPMX19_06099 0.34 -0.5 281,152 - MPMX19_06099 0.34 -1.6 281,152 - MPMX19_06099 0.34 +0.0 281,315 + MPMX19_06099 0.54 +0.5 281,315 + MPMX19_06099 0.54 -1.1 281,315 + MPMX19_06099 0.54 -0.4 281,315 + MPMX19_06099 0.54 -0.3 281,315 + MPMX19_06099 0.54 +1.0 281,315 + MPMX19_06099 0.54 +0.3 281,315 + MPMX19_06099 0.54 -0.3 281,315 + MPMX19_06099 0.54 -0.4 281,315 + MPMX19_06099 0.54 -0.2 281,315 + MPMX19_06099 0.54 -0.2 281,315 + MPMX19_06099 0.54 +0.2 281,315 + MPMX19_06099 0.54 -0.4 281,315 + MPMX19_06099 0.54 -0.9 281,315 + MPMX19_06099 0.54 +0.6 281,315 + MPMX19_06099 0.54 -0.0 281,316 - MPMX19_06099 0.54 -0.4 281,316 - MPMX19_06099 0.54 -0.6 281,316 - MPMX19_06099 0.54 -2.7 281,316 - MPMX19_06099 0.54 -1.3 281,316 - MPMX19_06099 0.54 -0.7 281,316 - MPMX19_06099 0.54 -0.9 281,316 - MPMX19_06099 0.54 -1.3 281,316 - MPMX19_06099 0.54 -0.2 281,316 - MPMX19_06099 0.54 -0.9 281,316 - MPMX19_06099 0.54 +0.2 281,316 - MPMX19_06099 0.54 -1.0 281,316 - MPMX19_06099 0.54 -0.3 281,316 - MPMX19_06099 0.54 +0.5 281,366 + MPMX19_06099 0.60 +0.8 281,366 + MPMX19_06099 0.60 -0.2 281,367 - MPMX19_06099 0.61 -3.7 281,367 - MPMX19_06099 0.61 -0.7 281,367 - MPMX19_06099 0.61 +1.0 281,367 - MPMX19_06099 0.61 -1.1 281,649 + -0.2 281,649 + +0.0 281,649 + -0.4 281,649 + -0.5 281,649 + -0.0 281,649 + -0.8 281,650 - -0.8 281,650 - -0.2 281,650 - -0.4 281,650 - -2.1 281,650 - -0.3 281,650 - -0.2 281,650 - -0.8 281,651 + -0.3 281,651 + -0.8 281,651 + -0.7 281,651 + +1.0 281,651 + +0.2 281,651 + -0.8 281,652 - -0.9 281,652 - -1.9 281,717 + -0.0 281,717 + -0.7 281,718 - +0.4 281,718 - +0.4 281,718 - -0.1 281,719 + -0.1 281,719 + -0.1 281,719 + -1.4 281,719 + -0.3 281,719 + +0.1 281,719 + +0.2 281,719 + -0.7 281,719 + -1.1 281,719 + -1.0 281,719 + +0.7 281,719 + +0.4 281,719 + +0.2 281,719 + -0.5 281,719 + +0.4 281,719 + +0.7 281,719 + -0.6 281,719 + -0.5 281,719 + -0.4 281,719 + -1.1 281,719 + +0.3 281,719 + -1.2 281,719 + -0.4 281,719 + -1.4 281,719 + +0.1 281,719 + -0.5 281,719 + -0.0 281,719 + -1.3 281,719 + -0.4 281,719 + +0.8 281,720 - +0.3 281,720 - -0.3 281,720 - +0.2 281,720 - +3.0 281,720 - +0.1 281,720 - -1.8 281,720 - +1.9 281,720 - -0.5 281,720 - +0.1 281,720 - -1.8 281,720 - -2.1 281,720 - -0.3 281,720 - -0.6 281,720 - -1.1 281,720 - -0.0 281,720 - -2.1 281,720 - -0.2 281,720 - +0.4 281,720 - -1.6 281,720 - -0.2 281,720 - -0.1 281,720 - +0.1 281,720 - -0.6 281,720 - -0.4 281,720 - +0.2 281,720 - -1.5 281,720 - -0.4 281,723 + +0.1 281,723 + -1.0 281,723 + +0.4 281,723 + -0.3 281,723 + -1.1 281,723 + -0.6 281,723 + -1.0 281,723 + -0.7 281,723 + -0.5 281,723 + +1.7 281,723 + -0.9 281,723 + -0.8 281,724 - +1.2 281,724 - +0.2 281,724 - -0.6 281,724 - -0.3 281,724 - -1.0 281,855 + +0.4 281,855 + +0.2 281,855 + -0.4 281,855 + -0.6 281,855 + -0.4 281,855 + -0.5 281,855 + -0.2 281,855 + -2.4 281,855 + -0.7 281,855 + -1.2 281,855 + -0.2 281,855 + -0.8 281,855 + +0.5 281,855 + +0.6 281,855 + -0.5 281,855 + -0.0 281,855 + -0.4 281,855 + -1.3 281,855 + -0.3 281,855 + -0.8 281,855 + -0.7 281,855 + -1.5 281,856 - -0.6 281,856 - -1.0 281,856 - -0.7 281,856 - +0.4 281,856 - -0.0 281,856 - -0.2 281,856 - -0.5 281,856 - -0.8 281,856 - +1.2 281,856 - -0.6 281,856 - +0.3 281,856 - -0.5 281,856 - +0.2 281,856 - +0.3 281,856 - -0.8 281,856 - -0.1 281,856 - -1.6 281,856 - -0.2 281,856 - -0.8 281,856 - -0.2 281,856 - -1.6
Or see this region's nucleotide sequence